RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 CDCA7LQ96GN5 454 aa14.6□□□□□ -0.07
PDPN-202ENST00000376057 FBLN1P23142 703 aa14.6□□□□□ -0.07
PDPN-202ENST00000376057 TMPOP42166 694 aaKnown RBP14.6□□□□□ -0.07
PDPN-202ENST00000376057 KRT28Q7Z3Y7 464 aa14.6□□□□□ -0.07
PDPN-202ENST00000376057 NPHP3Q7Z494 1330 aa14.59□□□□□ -0.07
PDPN-202ENST00000376057 MAPK8IP3Q9UPT6 1336 aa14.59□□□□□ -0.07
PDPN-202ENST00000376057 ZNF335Q9H4Z2 1342 aaPredicted RBP14.59□□□□□ -0.07
PDPN-202ENST00000376057 RCAN3Q9UKA8 241 aa14.58□□□□□ -0.08
PDPN-202ENST00000376057 CAMTA1Q9Y6Y1 1673 aa14.58□□□□□ -0.08
PDPN-202ENST00000376057 PPM1GO15355 546 aaPredicted RBP14.57□□□□□ -0.08
PDPN-202ENST00000376057 AEBP2Q6ZN18 517 aaPredicted RBP14.57□□□□□ -0.08
PDPN-202ENST00000376057 NHSL1Q5SYE7 1610 aa14.57□□□□□ -0.08
PDPN-202ENST00000376057 NEFMP07197 916 aa14.57□□□□□ -0.08
PDPN-202ENST00000376057 IGSF1Q8N6C5 1336 aa14.57□□□□□ -0.08
PDPN-202ENST00000376057 NCAPD2Q15021 1401 aa14.57□□□□□ -0.08
PDPN-202ENST00000376057 TNS3Q68CZ2 1445 aa14.57□□□□□ -0.08
PDPN-202ENST00000376057 FOXO3O43524 673 aa14.56□□□□□ -0.08
PDPN-202ENST00000376057 HOXC9P31274 260 aa14.56□□□□□ -0.08
PDPN-202ENST00000376057 TRIM35Q9UPQ4 493 aa14.56□□□□□ -0.08
PDPN-202ENST00000376057 LTBP4Q8N2S1 1624 aa14.56□□□□□ -0.08
PDPN-202ENST00000376057 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
PDPN-202ENST00000376057 NFE2L2Q16236 605 aa14.56□□□□□ -0.08
PDPN-202ENST00000376057 IP6K1Q92551 441 aa14.56□□□□□ -0.08
PDPN-202ENST00000376057 SALL2Q9Y467 1007 aaPredicted RBP14.56□□□□□ -0.08
PDPN-202ENST00000376057 CT47B1P0C2W7 299 aaPredicted RBP14.56□□□□□ -0.08
PDPN-202ENST00000376057 PRKAR2BP31323 418 aa14.56□□□□□ -0.08
PDPN-202ENST00000376057 HSP90AB2PQ58FF8 381 aa14.56□□□□□ -0.08
PDPN-202ENST00000376057 PLEKHG2Q9H7P9 1386 aa14.55□□□□□ -0.08
PDPN-202ENST00000376057 FKBP8Q14318 412 aa14.55□□□□□ -0.08
PDPN-202ENST00000376057 DLG5Q8TDM6 1919 aa14.55□□□□□ -0.08
PDPN-202ENST00000376057 AMPHP49418 695 aa14.54□□□□□ -0.08
PDPN-202ENST00000376057 LMOD3Q0VAK6 560 aa14.54□□□□□ -0.08
PDPN-202ENST00000376057 MYH16Q9H6N6 1097 aa14.54□□□□□ -0.08
PDPN-202ENST00000376057 CALD1Q05682 793 aaKnown RBP14.54□□□□□ -0.08
PDPN-202ENST00000376057 BRINP3Q76B58 766 aa14.53□□□□□ -0.08
PDPN-202ENST00000376057 ARHGEF25Q86VW2 580 aa14.53□□□□□ -0.08
PDPN-202ENST00000376057 SLAIN2Q9P270 581 aa14.53□□□□□ -0.08
PDPN-202ENST00000376057 SOS2Q07890 1332 aaPredicted RBP14.53□□□□□ -0.08
PDPN-202ENST00000376057 LMO7Q8WWI1 1683 aa14.53□□□□□ -0.08
PDPN-202ENST00000376057 SPINK5Q9NQ38 1064 aaPredicted RBP14.53□□□□□ -0.08
PDPN-202ENST00000376057 SPATA31A3Q5VYP0 1347 aa14.53□□□□□ -0.08
PDPN-202ENST00000376057 FAM208AQ9UK61 1670 aaKnown RBP14.53□□□□□ -0.08
PDPN-202ENST00000376057 COL18A1P39060 1754 aa14.52□□□□□ -0.08
PDPN-202ENST00000376057 GCP02774 474 aa14.52□□□□□ -0.08
PDPN-202ENST00000376057 RRP1P56182 461 aaKnown RBP14.52□□□□□ -0.08
PDPN-202ENST00000376057 RIPK4P57078 832 aa14.52□□□□□ -0.09
PDPN-202ENST00000376057 CPDO75976 1380 aa14.51□□□□□ -0.09
PDPN-202ENST00000376057 PHACTR3Q96KR7 559 aa14.51□□□□□ -0.09
PDPN-202ENST00000376057 RRP7AQ9Y3A4 280 aaKnown RBP14.5□□□□□ -0.09
PDPN-202ENST00000376057 SENP3-EIF4A1A0A087X0R7 540 aa14.5□□□□□ -0.09
PDPN-202ENST00000376057 HTATSF1O43719 755 aaKnown RBP14.49□□□□□ -0.09
PDPN-202ENST00000376057 HMOX1P09601 288 aa14.49□□□□□ -0.09
PDPN-202ENST00000376057 SULT6B1Q6IMI4 303 aa14.49□□□□□ -0.09
PDPN-202ENST00000376057 EYA1Q99502 592 aa14.49□□□□□ -0.09
PDPN-202ENST00000376057 AHDC1Q5TGY3 1603 aaPredicted RBP14.49□□□□□ -0.09
PDPN-202ENST00000376057 NUTM2GQ5VZR2 741 aa14.48□□□□□ -0.09
PDPN-202ENST00000376057 ABCA3Q99758 1704 aa14.48□□□□□ -0.09
PDPN-202ENST00000376057 LRRC37A3O60309 1634 aa14.48□□□□□ -0.09
PDPN-202ENST00000376057 ZNF853P0CG23 659 aa14.48□□□□□ -0.09
PDPN-202ENST00000376057 NEUROD2Q15784 382 aa14.47□□□□□ -0.09
PDPN-202ENST00000376057 ZNF428Q96B54 188 aa14.47□□□□□ -0.09
PDPN-202ENST00000376057 IFT57Q9NWB7 429 aa14.47□□□□□ -0.09
PDPN-202ENST00000376057 PPP4R2Q9NY27 417 aa14.47□□□□□ -0.09
PDPN-202ENST00000376057 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.46□□□□□ -0.09
PDPN-202ENST00000376057 AEBP1Q8IUX7 1158 aa14.46□□□□□ -0.1
PDPN-202ENST00000376057 COL22A1Q8NFW1 1626 aaPredicted RBP14.46□□□□□ -0.1
PDPN-202ENST00000376057 GAS2L2Q8NHY3 880 aa14.45□□□□□ -0.1
PDPN-202ENST00000376057 FANCIQ9NVI1 1328 aa14.45□□□□□ -0.1
PDPN-202ENST00000376057 GNAI1P63096 354 aa14.45□□□□□ -0.1
PDPN-202ENST00000376057 XPCQ01831 940 aaPredicted RBP14.45□□□□□ -0.1
PDPN-202ENST00000376057 SOX12O15370 315 aa14.44□□□□□ -0.1
PDPN-202ENST00000376057 CFAP44Q96MT7 982 aa14.43□□□□□ -0.1
PDPN-202ENST00000376057 RGPD2P0DJD1 1756 aa14.43□□□□□ -0.1
PDPN-202ENST00000376057 RGPD5Q99666 1765 aa14.43□□□□□ -0.1
PDPN-202ENST00000376057 BRPF1P55201 1214 aaPredicted RBP14.42□□□□□ -0.1
PDPN-202ENST00000376057 BABAM1Q9NWV8 329 aa14.42□□□□□ -0.1
PDPN-202ENST00000376057 ROBO1Q9Y6N7 1651 aa14.42□□□□□ -0.1
PDPN-202ENST00000376057 OVOS2A0A0G2JMS6 1433 aa14.42□□□□□ -0.1
PDPN-202ENST00000376057 CRB1P82279 1406 aa14.42□□□□□ -0.1
PDPN-202ENST00000376057 RARSP54136 660 aaKnown RBP14.42□□□□□ -0.1
PDPN-202ENST00000376057 ADAMTS7Q9UKP4 1686 aa14.42□□□□□ -0.1
PDPN-202ENST00000376057 PDE3AQ14432 1141 aa14.4□□□□□ -0.1
PDPN-202ENST00000376057 MTHFSDQ2M296 383 aaKnown RBP14.4□□□□□ -0.1
PDPN-202ENST00000376057 ALDH1L2Q3SY69 923 aa14.4□□□□□ -0.1
PDPN-202ENST00000376057 NBPF6Q5VWK0 638 aa14.4□□□□□ -0.1
PDPN-202ENST00000376057 NBPF4Q96M43 638 aa14.4□□□□□ -0.1
PDPN-202ENST00000376057 ERBB3P21860 1342 aa14.4□□□□□ -0.1
PDPN-202ENST00000376057 ANKRD24Q8TF21 1146 aa14.39□□□□□ -0.11
PDPN-202ENST00000376057 DDX17Q92841 729 aaKnown RBP14.39□□□□□ -0.11
PDPN-202ENST00000376057 KIAA0232Q92628 1395 aa14.39□□□□□ -0.11
PDPN-202ENST00000376057 CHL1O00533 1208 aa14.39□□□□□ -0.11
PDPN-202ENST00000376057 AAMPQ13685 434 aa14.39□□□□□ -0.11
PDPN-202ENST00000376057 AMOTQ4VCS5 1084 aa14.39□□□□□ -0.11
PDPN-202ENST00000376057 MAP3K5Q99683 1374 aa14.38□□□□□ -0.11
PDPN-202ENST00000376057 LMOD2Q6P5Q4 547 aa14.38□□□□□ -0.11
PDPN-202ENST00000376057 SOS1Q07889 1333 aaPredicted RBP14.38□□□□□ -0.11
PDPN-202ENST00000376057 AXIN2Q9Y2T1 843 aa14.37□□□□□ -0.11
PDPN-202ENST00000376057 HAP1P54257 671 aaPredicted RBP14.37□□□□□ -0.11
PDPN-202ENST00000376057 PKD1L3Q7Z443 1732 aa14.37□□□□□ -0.11
PDPN-202ENST00000376057 GNAT3A8MTJ3 354 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms