RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 RALYLQ86SE5 291 aaKnown RBP10.44□□□□□ -0.74
SHROOM4-202ENST00000376020 TOPBP1Q92547 1522 aa10.44□□□□□ -0.74
SHROOM4-202ENST00000376020 TMCO3Q6UWJ1 677 aa10.44□□□□□ -0.74
SHROOM4-202ENST00000376020 CHD1LQ86WJ1 897 aa10.44□□□□□ -0.74
SHROOM4-202ENST00000376020 TBC1D32Q96NH3 1257 aa10.44□□□□□ -0.74
SHROOM4-202ENST00000376020 SFPQP23246 707 aaKnown RBP eCLIP10.44□□□□□ -0.74
SHROOM4-202ENST00000376020 TXLNAP40222 546 aa10.44□□□□□ -0.74
SHROOM4-202ENST00000376020 LNPKQ9C0E8 428 aa10.44□□□□□ -0.74
SHROOM4-202ENST00000376020 SLC4A10Q6U841 1118 aa10.44□□□□□ -0.74
SHROOM4-202ENST00000376020 ARID3AQ99856 593 aa10.44□□□□□ -0.74
SHROOM4-202ENST00000376020 SHANK2Q9UPX8 1470 aa10.44□□□□□ -0.74
SHROOM4-202ENST00000376020 GOLGA6L10A0A0M3HER8 536 aa10.44□□□□□ -0.74
SHROOM4-202ENST00000376020 TCP11L2Q8N4U5 519 aa10.44□□□□□ -0.74
SHROOM4-202ENST00000376020 TNMDQ9H2S6 317 aa10.44□□□□□ -0.74
SHROOM4-202ENST00000376020 ANAPC15P60006 121 aa10.44□□□□□ -0.74
SHROOM4-202ENST00000376020 DNAAF4Q8WXU2 420 aa10.44□□□□□ -0.74
SHROOM4-202ENST00000376020 CYP46A1Q9Y6A2 500 aa10.44□□□□□ -0.74
SHROOM4-202ENST00000376020 CCDC171Q6TFL3 1326 aa10.44□□□□□ -0.74
SHROOM4-202ENST00000376020 SLFN5Q08AF3 891 aa10.43□□□□□ -0.74
SHROOM4-202ENST00000376020 AMOTL1Q8IY63 956 aa10.43□□□□□ -0.74
SHROOM4-202ENST00000376020 STIM1Q13586 685 aa10.43□□□□□ -0.74
SHROOM4-202ENST00000376020 MICALCLQ6ZW33 695 aa10.43□□□□□ -0.74
SHROOM4-202ENST00000376020 PDZRN3Q9UPQ7 1066 aa10.43□□□□□ -0.74
SHROOM4-202ENST00000376020 GNAI2P04899 355 aa10.43□□□□□ -0.74
SHROOM4-202ENST00000376020 TIGD1Q96MW7 591 aa10.43□□□□□ -0.74
SHROOM4-202ENST00000376020 BCL11BQ9C0K0 894 aaPredicted RBP10.43□□□□□ -0.74
SHROOM4-202ENST00000376020 EID1Q9Y6B2 187 aa10.43□□□□□ -0.74
SHROOM4-202ENST00000376020 IFT140Q96RY7 1462 aa10.43□□□□□ -0.74
SHROOM4-202ENST00000376020 GAS2L2Q8NHY3 880 aa10.43□□□□□ -0.74
SHROOM4-202ENST00000376020 UGGT2Q9NYU1 1516 aa10.42□□□□□ -0.74
SHROOM4-202ENST00000376020 PRPF40AO75400 957 aaKnown RBP10.42□□□□□ -0.74
SHROOM4-202ENST00000376020 KIAA0586Q9BVV6 1533 aa10.42□□□□□ -0.74
SHROOM4-202ENST00000376020 CCDC30Q5VVM6 783 aa10.42□□□□□ -0.74
SHROOM4-202ENST00000376020 PANK1Q8TE04 598 aa10.42□□□□□ -0.74
SHROOM4-202ENST00000376020 JPH4Q96JJ6 628 aa10.42□□□□□ -0.74
SHROOM4-202ENST00000376020 NPC1L1Q9UHC9 1359 aa10.42□□□□□ -0.74
SHROOM4-202ENST00000376020 AMPHP49418 695 aa10.42□□□□□ -0.74
SHROOM4-202ENST00000376020 EHBP1Q8NDI1 1231 aa10.42□□□□□ -0.74
SHROOM4-202ENST00000376020 HDAC1Q13547 482 aaPredicted RBP10.42□□□□□ -0.74
SHROOM4-202ENST00000376020 NUP62CLQ9H1M0 184 aa10.42□□□□□ -0.74
SHROOM4-202ENST00000376020 DDX19AQ9NUU7 478 aaKnown RBP10.42□□□□□ -0.74
SHROOM4-202ENST00000376020 ERICH2A1L162 156 aa10.41□□□□□ -0.74
SHROOM4-202ENST00000376020 TAF7LQ5H9L4 462 aa10.41□□□□□ -0.74
SHROOM4-202ENST00000376020 FCHSD2O94868 740 aa10.41□□□□□ -0.74
SHROOM4-202ENST00000376020 UBTFL1P0CB47 393 aaPredicted RBP10.41□□□□□ -0.74
SHROOM4-202ENST00000376020 KRT222Q8N1A0 295 aa10.41□□□□□ -0.74
SHROOM4-202ENST00000376020 TEFQ10587 303 aa10.41□□□□□ -0.74
SHROOM4-202ENST00000376020 PTPN14Q15678 1187 aa10.41□□□□□ -0.74
SHROOM4-202ENST00000376020 DNMT1P26358 1616 aaKnown RBP10.41□□□□□ -0.74
SHROOM4-202ENST00000376020 SMAP1Q8IYB5 467 aaPredicted RBP10.41□□□□□ -0.74
SHROOM4-202ENST00000376020 KDM5AP29375 1690 aaKnown RBP10.41□□□□□ -0.74
SHROOM4-202ENST00000376020 PYM1Q9BRP8 204 aaKnown RBP10.41□□□□□ -0.74
SHROOM4-202ENST00000376020 IMMTQ16891 758 aaKnown RBP10.4□□□□□ -0.74
SHROOM4-202ENST00000376020 SCAF11Q99590 1463 aaKnown RBP10.4□□□□□ -0.74
SHROOM4-202ENST00000376020 HMGB1P09429 215 aaKnown RBP10.4□□□□□ -0.74
SHROOM4-202ENST00000376020 CCDC27Q2M243 656 aa10.4□□□□□ -0.74
SHROOM4-202ENST00000376020 ARHGAP45Q92619 1136 aa10.4□□□□□ -0.74
SHROOM4-202ENST00000376020 MSH5O43196 834 aa10.4□□□□□ -0.74
SHROOM4-202ENST00000376020 PIK3C2GO75747 1445 aa10.4□□□□□ -0.74
SHROOM4-202ENST00000376020 RAB11FIP3O75154 756 aa10.4□□□□□ -0.74
SHROOM4-202ENST00000376020 PARD3Q8TEW0 1356 aa10.4□□□□□ -0.74
SHROOM4-202ENST00000376020 BMS1Q14692 1282 aaKnown RBP10.4□□□□□ -0.74
SHROOM4-202ENST00000376020 ABCA5Q8WWZ7 1642 aa10.4□□□□□ -0.74
SHROOM4-202ENST00000376020 TTLL5Q6EMB2 1281 aa10.4□□□□□ -0.75
SHROOM4-202ENST00000376020 LRRCC1Q9C099 1032 aa10.4□□□□□ -0.75
SHROOM4-202ENST00000376020 IBTKQ9P2D0 1353 aaPredicted RBP10.39□□□□□ -0.75
SHROOM4-202ENST00000376020 FKBP5Q13451 457 aaPredicted RBP10.39□□□□□ -0.75
SHROOM4-202ENST00000376020 FOXD4L1Q9NU39 408 aa10.39□□□□□ -0.75
SHROOM4-202ENST00000376020 USP25Q9UHP3 1055 aa10.39□□□□□ -0.75
SHROOM4-202ENST00000376020 UBE2HP62256 183 aa10.39□□□□□ -0.75
SHROOM4-202ENST00000376020 AK9Q5TCS8 1911 aa10.39□□□□□ -0.75
SHROOM4-202ENST00000376020 WASF1Q92558 559 aa10.39□□□□□ -0.75
SHROOM4-202ENST00000376020 CCDC94Q9BW85 323 aaPredicted RBP10.39□□□□□ -0.75
SHROOM4-202ENST00000376020 SHTN1A0MZ66 631 aa10.39□□□□□ -0.75
SHROOM4-202ENST00000376020 PPFIBP1Q86W92 1011 aa10.39□□□□□ -0.75
SHROOM4-202ENST00000376020 HNRNPMP52272 730 aaKnown RBP eCLIP10.39□□□□□ -0.75
SHROOM4-202ENST00000376020 CCDC150Q8NCX0 1101 aa10.38□□□□□ -0.75
SHROOM4-202ENST00000376020 KDM5DQ9BY66 1539 aa10.38□□□□□ -0.75
SHROOM4-202ENST00000376020 C1orf141Q5JVX7 400 aa10.38□□□□□ -0.75
SHROOM4-202ENST00000376020 ANO10Q9NW15 660 aa10.38□□□□□ -0.75
SHROOM4-202ENST00000376020 ZKSCAN5Q9Y2L8 839 aa10.38□□□□□ -0.75
SHROOM4-202ENST00000376020 TCOF1Q13428 1488 aaKnown RBP10.38□□□□□ -0.75
SHROOM4-202ENST00000376020 BCL2L13Q9BXK5 485 aa10.38□□□□□ -0.75
SHROOM4-202ENST00000376020 SLC52A1Q9NWF4 448 aa10.38□□□□□ -0.75
SHROOM4-202ENST00000376020 CTNNA3Q9UI47 895 aa10.38□□□□□ -0.75
SHROOM4-202ENST00000376020 SENP3-EIF4A1A0A087X0R7 540 aa10.38□□□□□ -0.75
SHROOM4-202ENST00000376020 EPB41L2O43491 1005 aaKnown RBP10.37□□□□□ -0.75
SHROOM4-202ENST00000376020 OFD1O75665 1012 aa10.37□□□□□ -0.75
SHROOM4-202ENST00000376020 CRACR2AQ9BSW2 395 aa10.37□□□□□ -0.75
SHROOM4-202ENST00000376020 PUS7Q96PZ0 661 aaKnown RBP10.37□□□□□ -0.75
SHROOM4-202ENST00000376020 MAGI1Q96QZ7 1491 aaPredicted RBP10.37□□□□□ -0.75
SHROOM4-202ENST00000376020 GABPB1Q06547 395 aaPredicted RBP10.37□□□□□ -0.75
SHROOM4-202ENST00000376020 PTPRCP08575 1304 aa10.37□□□□□ -0.75
SHROOM4-202ENST00000376020 SMC2O95347 1197 aa10.37□□□□□ -0.75
SHROOM4-202ENST00000376020 INTS4Q96HW7 963 aaKnown RBP10.37□□□□□ -0.75
SHROOM4-202ENST00000376020 RAPGEF6Q8TEU7 1601 aa10.36□□□□□ -0.75
SHROOM4-202ENST00000376020 ANKRD18AQ8IVF6 992 aa10.36□□□□□ -0.75
SHROOM4-202ENST00000376020 RRP7AQ9Y3A4 280 aaKnown RBP10.36□□□□□ -0.75
SHROOM4-202ENST00000376020 RNF214Q8ND24 703 aa10.36□□□□□ -0.75
SHROOM4-202ENST00000376020 SPATA32Q96LK8 384 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms