RNA–Protein interactions for RNA: ENST00000374736.7

ABCA1-202, Transcript of ATP binding cassette subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA1, Length 10,494 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-202ENST00000374736 TRAF1Q13077 416 aa10.32□□□□□ -0.76
ABCA1-202ENST00000374736 LRRC23Q53EV4 343 aaPredicted RBP10.32□□□□□ -0.76
ABCA1-202ENST00000374736 TTC19Q6DKK2 380 aaPredicted RBP10.32□□□□□ -0.76
ABCA1-202ENST00000374736 CEP57Q86XR8 500 aa10.32□□□□□ -0.76
ABCA1-202ENST00000374736 TTC14Q96N46 770 aa10.32□□□□□ -0.76
ABCA1-202ENST00000374736 NEMFO60524 1076 aa10.32□□□□□ -0.76
ABCA1-202ENST00000374736 HDGFL1Q5TGJ6 251 aa10.32□□□□□ -0.76
ABCA1-202ENST00000374736 GTF2E1P29083 439 aaPredicted RBP10.32□□□□□ -0.76
ABCA1-202ENST00000374736 INF2Q27J81 1249 aa10.32□□□□□ -0.76
ABCA1-202ENST00000374736 C10orf67Q8IYJ2 551 aa10.31□□□□□ -0.76
ABCA1-202ENST00000374736 CCDC73Q6ZRK6 1079 aa10.31□□□□□ -0.76
ABCA1-202ENST00000374736 CFAP45Q9UL16 551 aa10.31□□□□□ -0.76
ABCA1-202ENST00000374736 PAIP2BQ9ULR5 123 aaKnown RBP10.31□□□□□ -0.76
ABCA1-202ENST00000374736 TSR1Q2NL82 804 aaKnown RBP10.31□□□□□ -0.76
ABCA1-202ENST00000374736 ABCF2Q9UG63 623 aa10.31□□□□□ -0.76
ABCA1-202ENST00000374736 EIF5P55010 431 aaKnown RBP10.31□□□□□ -0.76
ABCA1-202ENST00000374736 MAP7Q14244 749 aa10.31□□□□□ -0.76
ABCA1-202ENST00000374736 KDM4AO75164 1064 aa10.3□□□□□ -0.76
ABCA1-202ENST00000374736 ARHGAP25P42331 645 aa10.3□□□□□ -0.76
ABCA1-202ENST00000374736 NEDD9Q14511 834 aa10.3□□□□□ -0.76
ABCA1-202ENST00000374736 TPD52L1Q16890 204 aaPredicted RBP10.3□□□□□ -0.76
ABCA1-202ENST00000374736 VEZTQ9HBM0 779 aa10.3□□□□□ -0.76
ABCA1-202ENST00000374736 NAA25Q14CX7 972 aa10.3□□□□□ -0.76
ABCA1-202ENST00000374736 PPP1R9BQ96SB3 815 aa10.3□□□□□ -0.76
ABCA1-202ENST00000374736 NUDCQ9Y266 331 aa10.3□□□□□ -0.76
ABCA1-202ENST00000374736 SPTY2D1Q68D10 685 aaPredicted RBP10.3□□□□□ -0.76
ABCA1-202ENST00000374736 CCAR2Q8N163 923 aaKnown RBP10.3□□□□□ -0.76
ABCA1-202ENST00000374736 KIF18AQ8NI77 898 aa10.3□□□□□ -0.76
ABCA1-202ENST00000374736 UBXN4Q92575 508 aa10.3□□□□□ -0.76
ABCA1-202ENST00000374736 FAM76AQ8TAV0 307 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 BIRC2Q13490 618 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 BECN2A8MW95 431 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 NBPF8Q3BBV2 869 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 B4GALNT4Q76KP1 1039 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 VCXQ9H320 206 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 LUC7LQ9NQ29 371 aaKnown RBP10.29□□□□□ -0.76
ABCA1-202ENST00000374736 SLC8A1P32418 973 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 SEPT10Q9P0V9 454 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 DAAM2Q86T65 1068 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 CLNS1AP54105 237 aaKnown RBP10.29□□□□□ -0.76
ABCA1-202ENST00000374736 EBAG9O00559 213 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 CCDC40Q4G0X9 1142 aa10.28□□□□□ -0.76
ABCA1-202ENST00000374736 SMARCC1Q92922 1105 aaPredicted RBP10.28□□□□□ -0.76
ABCA1-202ENST00000374736 RWDD1Q9H446 243 aaPredicted RBP10.28□□□□□ -0.76
ABCA1-202ENST00000374736 LUC7L2Q9Y383 392 aaKnown RBP10.28□□□□□ -0.76
ABCA1-202ENST00000374736 EIF4G2P78344 907 aaKnown RBP eCLIP10.28□□□□□ -0.76
ABCA1-202ENST00000374736 EXOC1Q9NV70 894 aa10.28□□□□□ -0.76
ABCA1-202ENST00000374736 SDCCAG8Q86SQ7 713 aaPredicted RBP10.28□□□□□ -0.76
ABCA1-202ENST00000374736 TRIM6Q9C030 488 aaPredicted RBP10.28□□□□□ -0.76
ABCA1-202ENST00000374736 ISM2Q6H9L7 571 aa10.28□□□□□ -0.76
ABCA1-202ENST00000374736 SRRTQ9BXP5 876 aaKnown RBP10.28□□□□□ -0.76
ABCA1-202ENST00000374736 DDX46Q7L014 1031 aaKnown RBP10.28□□□□□ -0.76
ABCA1-202ENST00000374736 ARMC9Q7Z3E5 817 aa10.27□□□□□ -0.76
ABCA1-202ENST00000374736 ERC2O15083 957 aa10.27□□□□□ -0.77
ABCA1-202ENST00000374736 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.27□□□□□ -0.771e-6■■□□□ 11.8
ABCA1-202ENST00000374736 MSH5O43196 834 aa10.27□□□□□ -0.77
ABCA1-202ENST00000374736 PHLDB2Q86SQ0 1253 aa10.27□□□□□ -0.77
ABCA1-202ENST00000374736 TSPY26PQ9H489 355 aa10.27□□□□□ -0.77
ABCA1-202ENST00000374736 JRKLQ9Y4A0 524 aa10.27□□□□□ -0.77
ABCA1-202ENST00000374736 LRRFIP2Q9Y608 721 aaKnown RBP10.27□□□□□ -0.77
ABCA1-202ENST00000374736 GJC2Q5T442 439 aaPredicted RBP10.27□□□□□ -0.77
ABCA1-202ENST00000374736 ACRBPQ8NEB7 543 aa10.27□□□□□ -0.77
ABCA1-202ENST00000374736 DRC1Q96MC2 740 aa10.27□□□□□ -0.77
ABCA1-202ENST00000374736 BUB1BO60566 1050 aaPredicted RBP10.26□□□□□ -0.77
ABCA1-202ENST00000374736 FAM160A1Q05DH4 1040 aa10.26□□□□□ -0.77
ABCA1-202ENST00000374736 MAP7D1Q3KQU3 841 aa10.26□□□□□ -0.77
ABCA1-202ENST00000374736 H0YC42 278 aa10.26□□□□□ -0.77
ABCA1-202ENST00000374736 DHX16O60231 1041 aaKnown RBP10.26□□□□□ -0.77
ABCA1-202ENST00000374736 FRAT2O75474 233 aaPredicted RBP10.26□□□□□ -0.77
ABCA1-202ENST00000374736 TPD52P55327 224 aaPredicted RBP10.26□□□□□ -0.77
ABCA1-202ENST00000374736 MAP3K7CLP57077 242 aa10.26□□□□□ -0.77
ABCA1-202ENST00000374736 NEUROD2Q15784 382 aa10.26□□□□□ -0.77
ABCA1-202ENST00000374736 LMNTD2Q8IXW0 634 aa10.26□□□□□ -0.77
ABCA1-202ENST00000374736 ANKS4BQ8N8V4 417 aa10.26□□□□□ -0.77
ABCA1-202ENST00000374736 MORC4Q8TE76 937 aa10.26□□□□□ -0.77
ABCA1-202ENST00000374736 TUBA8Q9NY65 449 aaPredicted RBP10.26□□□□□ -0.77
ABCA1-202ENST00000374736 ZNF397Q8NF99 534 aaPredicted RBP10.26□□□□□ -0.77
ABCA1-202ENST00000374736 RABGAP1Q9Y3P9 1069 aa10.26□□□□□ -0.77
ABCA1-202ENST00000374736 DDX27Q96GQ7 796 aaKnown RBP10.26□□□□□ -0.77
ABCA1-202ENST00000374736 SPECC1LQ69YQ0 1117 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 CAVIN2O95810 425 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 IRAK4Q9NWZ3 460 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 DONSONQ9NYP3 566 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 SMC3Q9UQE7 1217 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 UTP6Q9NYH9 597 aaKnown RBP10.25□□□□□ -0.77
ABCA1-202ENST00000374736 MYO15BQ96JP2 1530 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 CGNL1Q0VF96 1302 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 ZNF500O60304 480 aaPredicted RBP10.25□□□□□ -0.77
ABCA1-202ENST00000374736 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.25□□□□□ -0.772e-6■□□□□ 8.3
ABCA1-202ENST00000374736 MACROD2A1Z1Q3 448 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 CCDC80Q76M96 950 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 RCAN3Q9UKA8 241 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 RMI1Q9H9A7 625 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 MTUS2Q5JR59 1369 aa10.24□□□□□ -0.77
ABCA1-202ENST00000374736 MSL1Q68DK7 614 aa10.24□□□□□ -0.77
ABCA1-202ENST00000374736 VCX3BQ9H321 246 aa10.24□□□□□ -0.77
ABCA1-202ENST00000374736 VCX3AQ9NNX9 186 aa10.24□□□□□ -0.77
ABCA1-202ENST00000374736 GMNNO75496 209 aa10.24□□□□□ -0.77
ABCA1-202ENST00000374736 CDKL5O76039 1030 aa10.24□□□□□ -0.77
ABCA1-202ENST00000374736 USP33Q8TEY7 942 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms