RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 STAC3Q96MF2 364 aa7.62□□□□□ -1.19
PTPN3-202ENST00000374541 HOOK1Q9UJC3 728 aaKnown RBP7.62□□□□□ -1.19
PTPN3-202ENST00000374541 RFX1P22670 979 aa7.62□□□□□ -1.19
PTPN3-202ENST00000374541 CENPQQ7L2Z9 268 aaPredicted RBP7.62□□□□□ -1.19
PTPN3-202ENST00000374541 CWC15Q9P013 229 aaKnown RBP7.62□□□□□ -1.19
PTPN3-202ENST00000374541 GGNBP2Q9H3C7 697 aa7.61□□□□□ -1.19
PTPN3-202ENST00000374541 YEATS2Q9ULM3 1422 aa7.61□□□□□ -1.19
PTPN3-202ENST00000374541 DIAPH1O60610 1272 aaKnown RBP7.61□□□□□ -1.19
PTPN3-202ENST00000374541 DCTN1Q14203 1278 aa7.61□□□□□ -1.19
PTPN3-202ENST00000374541 CHMP4BP1P59074 171 aa7.61□□□□□ -1.19
PTPN3-202ENST00000374541 CPLX2Q6PUV4 134 aaKnown RBP7.61□□□□□ -1.19
PTPN3-202ENST00000374541 CUL7Q14999 1698 aa7.61□□□□□ -1.19
PTPN3-202ENST00000374541 R3HDM1Q15032 1099 aaKnown RBP7.61□□□□□ -1.19
PTPN3-202ENST00000374541 ARHGEF6Q15052 776 aa7.61□□□□□ -1.19
PTPN3-202ENST00000374541 MSL1Q68DK7 614 aa7.61□□□□□ -1.19
PTPN3-202ENST00000374541 CCDC61Q9Y6R9 512 aa7.61□□□□□ -1.19
PTPN3-202ENST00000374541 DDX49Q9Y6V7 483 aaKnown RBP7.61□□□□□ -1.19
PTPN3-202ENST00000374541 TRIM6-TRIM34B2RNG4 842 aa7.61□□□□□ -1.19
PTPN3-202ENST00000374541 HSPA5P11021 654 aaKnown RBP7.61□□□□□ -1.19
PTPN3-202ENST00000374541 VPS8Q8N3P4 1428 aa7.61□□□□□ -1.19
PTPN3-202ENST00000374541 MPHOSPH8Q99549 860 aa7.61□□□□□ -1.19
PTPN3-202ENST00000374541 H3BQV1 296 aa7.6□□□□□ -1.19
PTPN3-202ENST00000374541 FAM161AQ3B820 660 aa7.6□□□□□ -1.19
PTPN3-202ENST00000374541 IFFO2Q5TF58 517 aa7.6□□□□□ -1.19
PTPN3-202ENST00000374541 TSHZ2Q9NRE2 1034 aa7.6□□□□□ -1.19
PTPN3-202ENST00000374541 TRAPPC3LQ5T215 181 aa7.6□□□□□ -1.19
PTPN3-202ENST00000374541 ERCC4Q92889 916 aaPredicted RBP7.6□□□□□ -1.19
PTPN3-202ENST00000374541 TSPYL4Q9UJ04 414 aa7.6□□□□□ -1.19
PTPN3-202ENST00000374541 RAB3GAP2Q9H2M9 1393 aa7.6□□□□□ -1.19
PTPN3-202ENST00000374541 TCIRG1Q13488 830 aa7.6□□□□□ -1.19
PTPN3-202ENST00000374541 GNL3LQ9NVN8 582 aaKnown RBP7.6□□□□□ -1.19
PTPN3-202ENST00000374541 SEPT12Q8IYM1 358 aa7.6□□□□□ -1.19
PTPN3-202ENST00000374541 FLAD1Q8NFF5 587 aa7.6□□□□□ -1.19
PTPN3-202ENST00000374541 GAS2L2Q8NHY3 880 aa7.6□□□□□ -1.19
PTPN3-202ENST00000374541 CNNM1Q9NRU3 951 aa7.6□□□□□ -1.19
PTPN3-202ENST00000374541 CCDC66A2RUB6 948 aa7.59□□□□□ -1.19
PTPN3-202ENST00000374541 HMOX1P09601 288 aa7.59□□□□□ -1.19
PTPN3-202ENST00000374541 CCDC191Q8NCU4 936 aa7.59□□□□□ -1.19
PTPN3-202ENST00000374541 RUFY1Q96T51 708 aa7.59□□□□□ -1.19
PTPN3-202ENST00000374541 USP47Q96K76 1375 aa7.59□□□□□ -1.19
PTPN3-202ENST00000374541 ATP2B2Q01814 1243 aa7.59□□□□□ -1.19
PTPN3-202ENST00000374541 HSP90B2PQ58FF3 399 aa7.59□□□□□ -1.19
PTPN3-202ENST00000374541 DHX8Q14562 1220 aaKnown RBP7.59□□□□□ -1.19
PTPN3-202ENST00000374541 KIF22Q14807 665 aa7.59□□□□□ -1.19
PTPN3-202ENST00000374541 NBPF6Q5VWK0 638 aa7.59□□□□□ -1.19
PTPN3-202ENST00000374541 NBPF5PQ86XG9 351 aaPredicted RBP7.59□□□□□ -1.19
PTPN3-202ENST00000374541 NBPF4Q96M43 638 aa7.59□□□□□ -1.19
PTPN3-202ENST00000374541 ATAD2Q6PL18 1390 aa7.59□□□□□ -1.19
PTPN3-202ENST00000374541 GIGYF1O75420 1035 aaPredicted RBP7.59□□□□□ -1.19
PTPN3-202ENST00000374541 TCP11L2Q8N4U5 519 aa7.59□□□□□ -1.19
PTPN3-202ENST00000374541 OGFOD1Q8N543 542 aa7.59□□□□□ -1.19
PTPN3-202ENST00000374541 FAM184AQ8NB25 1140 aa7.59□□□□□ -1.19
PTPN3-202ENST00000374541 DIAPH3Q9NSV4 1193 aa7.59□□□□□ -1.19
PTPN3-202ENST00000374541 GRIN3BO60391 1043 aa7.58□□□□□ -1.2
PTPN3-202ENST00000374541 AKAP17AQ02040 695 aaKnown RBP7.58□□□□□ -1.2
PTPN3-202ENST00000374541 WWC2Q6AWC2 1192 aa7.58□□□□□ -1.2
PTPN3-202ENST00000374541 SETDB2Q96T68 719 aa7.58□□□□□ -1.2
PTPN3-202ENST00000374541 TRAPPC8Q9Y2L5 1435 aa7.58□□□□□ -1.2
PTPN3-202ENST00000374541 AAMPQ13685 434 aa7.58□□□□□ -1.2
PTPN3-202ENST00000374541 CEP170Q5SW79 1584 aa7.58□□□□□ -1.2
PTPN3-202ENST00000374541 FANCIQ9NVI1 1328 aa7.58□□□□□ -1.2
PTPN3-202ENST00000374541 GNPATO15228 680 aa7.58□□□□□ -1.2
PTPN3-202ENST00000374541 REC8O95072 547 aa7.58□□□□□ -1.2
PTPN3-202ENST00000374541 NOL8Q76FK4 1167 aaKnown RBP7.58□□□□□ -1.2
PTPN3-202ENST00000374541 CCAR2Q8N163 923 aaKnown RBP7.58□□□□□ -1.2
PTPN3-202ENST00000374541 RUFY2Q8WXA3 655 aa7.58□□□□□ -1.2
PTPN3-202ENST00000374541 CCDC43Q96MW1 224 aaKnown RBP7.58□□□□□ -1.2
PTPN3-202ENST00000374541 CFAP43Q8NDM7 1665 aa7.58□□□□□ -1.2
PTPN3-202ENST00000374541 ZCRB1Q8TBF4 217 aaKnown RBP7.58□□□□□ -1.2
PTPN3-202ENST00000374541 SYNE3Q6ZMZ3 975 aa7.58□□□□□ -1.2
PTPN3-202ENST00000374541 DDX17Q92841 729 aaKnown RBP7.58□□□□□ -1.2
PTPN3-202ENST00000374541 H0YIN7 160 aa7.57□□□□□ -1.2
PTPN3-202ENST00000374541 EFCAB5A4FU69 1503 aa7.57□□□□□ -1.2
PTPN3-202ENST00000374541 ZFYVE16Q7Z3T8 1539 aa7.57□□□□□ -1.2
PTPN3-202ENST00000374541 ELL2O00472 640 aaPredicted RBP7.57□□□□□ -1.2
PTPN3-202ENST00000374541 IL2RBP14784 551 aa7.57□□□□□ -1.2
PTPN3-202ENST00000374541 DISP1Q96F81 1524 aa7.57□□□□□ -1.2
PTPN3-202ENST00000374541 ZBTB7AO95365 584 aa7.57□□□□□ -1.2
PTPN3-202ENST00000374541 MYL6BP14649 208 aa7.57□□□□□ -1.2
PTPN3-202ENST00000374541 ZNF710Q8N1W2 664 aa7.57□□□□□ -1.2
PTPN3-202ENST00000374541 MPHOSPH10O00566 681 aaKnown RBP7.57□□□□□ -1.2
PTPN3-202ENST00000374541 APPP05067 770 aa7.57□□□□□ -1.2
PTPN3-202ENST00000374541 RDXP35241 583 aaKnown RBP7.57□□□□□ -1.2
PTPN3-202ENST00000374541 MYO6Q9UM54 1294 aa7.57□□□□□ -1.2
PTPN3-202ENST00000374541 A2MP01023 1474 aa7.57□□□□□ -1.2
PTPN3-202ENST00000374541 IGHMBP2P38935 993 aaKnown RBP7.57□□□□□ -1.2
PTPN3-202ENST00000374541 WDR70Q9NW82 654 aa7.57□□□□□ -1.2
PTPN3-202ENST00000374541 DDX46Q7L014 1031 aaKnown RBP7.56□□□□□ -1.2
PTPN3-202ENST00000374541 TMEM94Q12767 1356 aa7.56□□□□□ -1.2
PTPN3-202ENST00000374541 PES1O00541 588 aaKnown RBP7.56□□□□□ -1.2
PTPN3-202ENST00000374541 CCP110O43303 1012 aa7.56□□□□□ -1.2
PTPN3-202ENST00000374541 CHMP5Q9NZZ3 219 aa7.56□□□□□ -1.2
PTPN3-202ENST00000374541 CCDC141Q6ZP82 1450 aa7.56□□□□□ -1.2
PTPN3-202ENST00000374541 DHX29Q7Z478 1369 aaKnown RBP7.56□□□□□ -1.2
PTPN3-202ENST00000374541 CDK13Q14004 1512 aaKnown RBP7.56□□□□□ -1.2
PTPN3-202ENST00000374541 CREBRFQ8IUR6 639 aa7.56□□□□□ -1.2
PTPN3-202ENST00000374541 MNS1Q8NEH6 495 aa7.56□□□□□ -1.2
PTPN3-202ENST00000374541 NUCB2P80303 420 aa7.56□□□□□ -1.2
PTPN3-202ENST00000374541 EN1Q05925 392 aaPredicted RBP7.56□□□□□ -1.2
PTPN3-202ENST00000374541 TRIM29Q14134 588 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms