RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 LMOD2Q6P5Q4 547 aa12.87□□□□□ -0.35
PTPN20-202ENST00000374339 NGEFQ8N5V2 710 aa12.87□□□□□ -0.35
PTPN20-202ENST00000374339 ROBO1Q9Y6N7 1651 aa12.87□□□□□ -0.35
PTPN20-202ENST00000374339 USP19O94966 1318 aa12.87□□□□□ -0.35
PTPN20-202ENST00000374339 MED1Q15648 1581 aaPredicted RBP12.87□□□□□ -0.35
PTPN20-202ENST00000374339 MYCNP04198 464 aaPredicted RBP12.86□□□□□ -0.35
PTPN20-202ENST00000374339 SOS2Q07890 1332 aaPredicted RBP12.86□□□□□ -0.35
PTPN20-202ENST00000374339 MAP3K19Q56UN5 1328 aa12.86□□□□□ -0.35
PTPN20-202ENST00000374339 SPATA31A3Q5VYP0 1347 aa12.86□□□□□ -0.35
PTPN20-202ENST00000374339 U2SURPO15042 1029 aaKnown RBP12.85□□□□□ -0.35
PTPN20-202ENST00000374339 SOX12O15370 315 aa12.85□□□□□ -0.35
PTPN20-202ENST00000374339 U2AF1L5P0DN76 240 aaPredicted RBP12.85□□□□□ -0.35
PTPN20-202ENST00000374339 FBLN1P23142 703 aa12.85□□□□□ -0.35
PTPN20-202ENST00000374339 AMPHP49418 695 aa12.85□□□□□ -0.35
PTPN20-202ENST00000374339 U2AF1Q01081 240 aaKnown RBP eCLIP12.85□□□□□ -0.35
PTPN20-202ENST00000374339 AHDC1Q5TGY3 1603 aaPredicted RBP12.84□□□□□ -0.35
PTPN20-202ENST00000374339 CRYBG1Q9Y4K1 1723 aa12.84□□□□□ -0.35
PTPN20-202ENST00000374339 TOM1O60784 492 aa12.83□□□□□ -0.36
PTPN20-202ENST00000374339 GCP02774 474 aa12.83□□□□□ -0.36
PTPN20-202ENST00000374339 DDX17Q92841 729 aaKnown RBP12.83□□□□□ -0.36
PTPN20-202ENST00000374339 RUNDC1Q96C34 613 aa12.83□□□□□ -0.36
PTPN20-202ENST00000374339 FCHSD2O94868 740 aa12.82□□□□□ -0.36
PTPN20-202ENST00000374339 IL13P35225 146 aa12.82□□□□□ -0.36
PTPN20-202ENST00000374339 ABCC6O95255 1503 aa12.82□□□□□ -0.36
PTPN20-202ENST00000374339 RGPD1P0DJD0 1748 aa12.82□□□□□ -0.36
PTPN20-202ENST00000374339 NEFMP07197 916 aa12.81□□□□□ -0.36
PTPN20-202ENST00000374339 HOXC9P31274 260 aa12.81□□□□□ -0.36
PTPN20-202ENST00000374339 PDE3BQ13370 1112 aa12.81□□□□□ -0.36
PTPN20-202ENST00000374339 EIF4A2Q14240 407 aaKnown RBP12.81□□□□□ -0.36
PTPN20-202ENST00000374339 CCDC146Q8IYE0 955 aa12.81□□□□□ -0.36
PTPN20-202ENST00000374339 MAPK8IP3Q9UPT6 1336 aa12.8□□□□□ -0.36
PTPN20-202ENST00000374339 HSP90AB2PQ58FF8 381 aa12.8□□□□□ -0.36
PTPN20-202ENST00000374339 ARHGEF25Q86VW2 580 aa12.8□□□□□ -0.36
PTPN20-202ENST00000374339 IP6K1Q92551 441 aa12.8□□□□□ -0.36
PTPN20-202ENST00000374339 ABCA3Q99758 1704 aa12.79□□□□□ -0.36
PTPN20-202ENST00000374339 APAF1O14727 1248 aa12.79□□□□□ -0.36
PTPN20-202ENST00000374339 LRRC59Q96AG4 307 aaKnown RBP12.79□□□□□ -0.36
PTPN20-202ENST00000374339 PHLPP1O60346 1717 aa12.78□□□□□ -0.36
PTPN20-202ENST00000374339 TCP11L2Q8N4U5 519 aa12.78□□□□□ -0.36
PTPN20-202ENST00000374339 PLEKHF1Q96S99 279 aa12.78□□□□□ -0.36
PTPN20-202ENST00000374339 CPDO75976 1380 aa12.78□□□□□ -0.36
PTPN20-202ENST00000374339 RSPH6AQ9H0K4 717 aa12.77□□□□□ -0.37
PTPN20-202ENST00000374339 FAM208AQ9UK61 1670 aaKnown RBP12.76□□□□□ -0.37
PTPN20-202ENST00000374339 COL22A1Q8NFW1 1626 aaPredicted RBP12.76□□□□□ -0.37
PTPN20-202ENST00000374339 PRKAR2BP31323 418 aa12.76□□□□□ -0.37
PTPN20-202ENST00000374339 IGSF1Q8N6C5 1336 aa12.75□□□□□ -0.37
PTPN20-202ENST00000374339 ZBTB7CA1YPR0 619 aa12.75□□□□□ -0.37
PTPN20-202ENST00000374339 UBAP1LF5GYI3 381 aa12.75□□□□□ -0.37
PTPN20-202ENST00000374339 HMOX1P09601 288 aa12.75□□□□□ -0.37
PTPN20-202ENST00000374339 HAP1P54257 671 aaPredicted RBP12.75□□□□□ -0.37
PTPN20-202ENST00000374339 CCDC27Q2M243 656 aa12.75□□□□□ -0.37
PTPN20-202ENST00000374339 SALL2Q9Y467 1007 aaPredicted RBP12.75□□□□□ -0.37
PTPN20-202ENST00000374339 COL16A1Q07092 1604 aaPredicted RBP12.75□□□□□ -0.37
PTPN20-202ENST00000374339 KDRP35968 1356 aa12.74□□□□□ -0.37
PTPN20-202ENST00000374339 COL18A1P39060 1754 aa12.74□□□□□ -0.37
PTPN20-202ENST00000374339 PLEKHG5O94827 1062 aa12.74□□□□□ -0.37
PTPN20-202ENST00000374339 ZC3H6P61129 1189 aaKnown RBP12.74□□□□□ -0.37
PTPN20-202ENST00000374339 SULT6B1Q6IMI4 303 aa12.74□□□□□ -0.37
PTPN20-202ENST00000374339 CERKQ8TCT0 537 aa12.74□□□□□ -0.37
PTPN20-202ENST00000374339 RGPD5Q99666 1765 aa12.74□□□□□ -0.37
PTPN20-202ENST00000374339 ZNF521Q96K83 1311 aa12.73□□□□□ -0.37
PTPN20-202ENST00000374339 CABLES1Q8TDN4 633 aa12.73□□□□□ -0.37
PTPN20-202ENST00000374339 CAMTA1Q9Y6Y1 1673 aa12.73□□□□□ -0.37
PTPN20-202ENST00000374339 KIAA0232Q92628 1395 aa12.73□□□□□ -0.37
PTPN20-202ENST00000374339 SENP3-EIF4A1A0A087X0R7 540 aa12.72□□□□□ -0.37
PTPN20-202ENST00000374339 TMPOP42166 694 aaKnown RBP12.72□□□□□ -0.37
PTPN20-202ENST00000374339 PIP4K2BP78356 416 aa12.72□□□□□ -0.37
PTPN20-202ENST00000374339 GOLGA2Q08379 1002 aa12.72□□□□□ -0.37
PTPN20-202ENST00000374339 EYA1Q99502 592 aa12.72□□□□□ -0.37
PTPN20-202ENST00000374339 LMOD3Q0VAK6 560 aa12.71□□□□□ -0.37
PTPN20-202ENST00000374339 NEUROD2Q15784 382 aa12.71□□□□□ -0.37
PTPN20-202ENST00000374339 NFE2L2Q16236 605 aa12.71□□□□□ -0.37
PTPN20-202ENST00000374339 WDR63Q8IWG1 891 aa12.71□□□□□ -0.37
PTPN20-202ENST00000374339 WWC1Q8IX03 1113 aa12.71□□□□□ -0.37
PTPN20-202ENST00000374339 ANKRD24Q8TF21 1146 aa12.71□□□□□ -0.37
PTPN20-202ENST00000374339 LTV1Q96GA3 475 aaPredicted RBP12.71□□□□□ -0.37
PTPN20-202ENST00000374339 ERBB3P21860 1342 aa12.71□□□□□ -0.38
PTPN20-202ENST00000374339 LMO7Q8WWI1 1683 aa12.71□□□□□ -0.38
PTPN20-202ENST00000374339 PRDM11Q9NQV5 511 aa12.7□□□□□ -0.38
PTPN20-202ENST00000374339 NCAPD2Q15021 1401 aa12.7□□□□□ -0.38
PTPN20-202ENST00000374339 RGPD2P0DJD1 1756 aa12.7□□□□□ -0.38
PTPN20-202ENST00000374339 DLG5Q8TDM6 1919 aa12.69□□□□□ -0.38
PTPN20-202ENST00000374339 E9PSI1 815 aa12.69□□□□□ -0.38
PTPN20-202ENST00000374339 RIPK4P57078 832 aa12.69□□□□□ -0.38
PTPN20-202ENST00000374339 AEBP1Q8IUX7 1158 aa12.69□□□□□ -0.38
PTPN20-202ENST00000374339 RRP7AQ9Y3A4 280 aaKnown RBP12.69□□□□□ -0.38
PTPN20-202ENST00000374339 COL14A1Q05707 1796 aaKnown RBP12.69□□□□□ -0.38
PTPN20-202ENST00000374339 CALD1Q05682 793 aaKnown RBP12.69□□□□□ -0.38
PTPN20-202ENST00000374339 PHACTR3Q96KR7 559 aa12.69□□□□□ -0.38
PTPN20-202ENST00000374339 AXIN2Q9Y2T1 843 aa12.69□□□□□ -0.38
PTPN20-202ENST00000374339 PLEKHG2Q9H7P9 1386 aa12.68□□□□□ -0.38
PTPN20-202ENST00000374339 NBPF6Q5VWK0 638 aa12.68□□□□□ -0.38
PTPN20-202ENST00000374339 NBPF4Q96M43 638 aa12.68□□□□□ -0.38
PTPN20-202ENST00000374339 IL16Q14005 1332 aa12.67□□□□□ -0.38
PTPN20-202ENST00000374339 SLFN5Q08AF3 891 aa12.67□□□□□ -0.38
PTPN20-202ENST00000374339 CHRNA2Q15822 529 aa12.67□□□□□ -0.38
PTPN20-202ENST00000374339 GAS2L2Q8NHY3 880 aa12.67□□□□□ -0.38
PTPN20-202ENST00000374339 FOXD4L1Q9NU39 408 aa12.67□□□□□ -0.38
PTPN20-202ENST00000374339 CSB-PGBD3P0DP91 1061 aa12.66□□□□□ -0.38
PTPN20-202ENST00000374339 CDCA7LQ96GN5 454 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms