RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 CAMSAP1Q5T5Y3 1602 aa15.9■□□□□ 0.14
PRPF4-201ENST00000374198 RBM27Q9P2N5 1060 aaKnown RBP15.9■□□□□ 0.14
PRPF4-201ENST00000374198 CYP2E1P05181 493 aaPredicted RBP15.89■□□□□ 0.13
PRPF4-201ENST00000374198 CHMP4BQ9H444 224 aaKnown RBP15.89■□□□□ 0.13
PRPF4-201ENST00000374198 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.89■□□□□ 0.13
PRPF4-201ENST00000374198 MYO3AQ8NEV4 1616 aa15.89■□□□□ 0.13
PRPF4-201ENST00000374198 NUCB1Q02818 461 aa15.89■□□□□ 0.13
PRPF4-201ENST00000374198 GPT2Q8TD30 523 aa15.89■□□□□ 0.13
PRPF4-201ENST00000374198 BMP2KLQ5H9B9 411 aa15.88■□□□□ 0.13
PRPF4-201ENST00000374198 CFAP65Q6ZU64 1925 aaKnown RBP15.88■□□□□ 0.13
PRPF4-201ENST00000374198 PTMAP06454 111 aaKnown RBP15.88■□□□□ 0.13
PRPF4-201ENST00000374198 IPO4Q8TEX9 1081 aaKnown RBP15.88■□□□□ 0.13
PRPF4-201ENST00000374198 RUNDC1Q96C34 613 aa15.88■□□□□ 0.13
PRPF4-201ENST00000374198 DDX19BQ9UMR2 479 aa15.88■□□□□ 0.13
PRPF4-201ENST00000374198 POLR3AO14802 1390 aaPredicted RBP15.87■□□□□ 0.13
PRPF4-201ENST00000374198 PRPF40AO75400 957 aaKnown RBP15.87■□□□□ 0.13
PRPF4-201ENST00000374198 TCP11L2Q8N4U5 519 aa15.87■□□□□ 0.13
PRPF4-201ENST00000374198 KIF3AQ9Y496 699 aa15.87■□□□□ 0.13
PRPF4-201ENST00000374198 CEP170BQ9Y4F5 1589 aaPredicted RBP15.86■□□□□ 0.13
PRPF4-201ENST00000374198 SYCE3A1L190 88 aa15.86■□□□□ 0.13
PRPF4-201ENST00000374198 LNPKQ9C0E8 428 aa15.86■□□□□ 0.13
PRPF4-201ENST00000374198 ZBTB7CA1YPR0 619 aa15.86■□□□□ 0.13
PRPF4-201ENST00000374198 TMEM63CQ9P1W3 806 aa15.86■□□□□ 0.13
PRPF4-201ENST00000374198 ERVK-7P63135 1459 aa15.85■□□□□ 0.13
PRPF4-201ENST00000374198 CHD1LQ86WJ1 897 aa15.85■□□□□ 0.13
PRPF4-201ENST00000374198 ITPRIPQ8IWB1 547 aa15.85■□□□□ 0.13
PRPF4-201ENST00000374198 MYOM1P52179 1685 aa15.85■□□□□ 0.13
PRPF4-201ENST00000374198 PIBF1Q8WXW3 757 aa15.85■□□□□ 0.13
PRPF4-201ENST00000374198 A2ML1A8K2U0 1454 aa15.85■□□□□ 0.13
PRPF4-201ENST00000374198 VWDEQ8N2E2 1590 aa15.84■□□□□ 0.13
PRPF4-201ENST00000374198 IQSEC2Q5JU85 1478 aa15.84■□□□□ 0.13
PRPF4-201ENST00000374198 SPDYE4A6NLX3 237 aa15.84■□□□□ 0.13
PRPF4-201ENST00000374198 TRIM27P14373 513 aa15.84■□□□□ 0.13
PRPF4-201ENST00000374198 LMTK2Q8IWU2 1503 aa15.84■□□□□ 0.13
PRPF4-201ENST00000374198 NOLC1Q14978 699 aaKnown RBP eCLIP15.84■□□□□ 0.13
PRPF4-201ENST00000374198 TBC1D9Q6ZT07 1266 aa15.84■□□□□ 0.13
PRPF4-201ENST00000374198 PDCL2Q8N4E4 241 aa15.84■□□□□ 0.13
PRPF4-201ENST00000374198 RNF214Q8ND24 703 aa15.84■□□□□ 0.13
PRPF4-201ENST00000374198 PKP1Q13835 747 aa15.83■□□□□ 0.13
PRPF4-201ENST00000374198 CCDC27Q2M243 656 aa15.83■□□□□ 0.13
PRPF4-201ENST00000374198 BCL2L12Q9HB09 334 aa15.83■□□□□ 0.13
PRPF4-201ENST00000374198 ZNF142P52746 1687 aaPredicted RBP15.83■□□□□ 0.13
PRPF4-201ENST00000374198 SPATA31D1Q6ZQQ2 1576 aa15.83■□□□□ 0.12
PRPF4-201ENST00000374198 AK9Q5TCS8 1911 aa15.83■□□□□ 0.12
PRPF4-201ENST00000374198 UNC13BO14795 1591 aa15.83■□□□□ 0.12
PRPF4-201ENST00000374198 FAM177BA6PVY3 158 aa15.82■□□□□ 0.12
PRPF4-201ENST00000374198 IQGAP1P46940 1657 aa15.82■□□□□ 0.12
PRPF4-201ENST00000374198 ZBTB40Q9NUA8 1239 aa15.82■□□□□ 0.12
PRPF4-201ENST00000374198 EFCAB6Q5THR3 1501 aa15.81■□□□□ 0.12
PRPF4-201ENST00000374198 CT47B1P0C2W7 299 aaPredicted RBP15.81■□□□□ 0.12
PRPF4-201ENST00000374198 CWC22Q9HCG8 908 aaKnown RBP15.81■□□□□ 0.12
PRPF4-201ENST00000374198 SMC4Q9NTJ3 1288 aa15.81■□□□□ 0.12
PRPF4-201ENST00000374198 CGNQ9P2M7 1197 aaKnown RBP15.81■□□□□ 0.12
PRPF4-201ENST00000374198 NCKAP5LQ9HCH0 1330 aa15.81■□□□□ 0.12
PRPF4-201ENST00000374198 RABEP1Q15276 862 aa15.81■□□□□ 0.12
PRPF4-201ENST00000374198 ATF7IPQ6VMQ6 1270 aa15.8■□□□□ 0.12
PRPF4-201ENST00000374198 THEMISQ8N1K5 641 aaPredicted RBP15.8■□□□□ 0.12
PRPF4-201ENST00000374198 NSFL1CQ9UNZ2 370 aaKnown RBP15.8■□□□□ 0.12
PRPF4-201ENST00000374198 IGSF3O75054 1194 aa15.8■□□□□ 0.12
PRPF4-201ENST00000374198 CARD14Q9BXL6 1004 aa15.8■□□□□ 0.12
PRPF4-201ENST00000374198 STRCQ7RTU9 1775 aa15.79■□□□□ 0.12
PRPF4-201ENST00000374198 STAG3Q9UJ98 1225 aa15.79■□□□□ 0.12
PRPF4-201ENST00000374198 UGGT1Q9NYU2 1555 aa15.79■□□□□ 0.12
PRPF4-201ENST00000374198 SCAF11Q99590 1463 aaKnown RBP15.79■□□□□ 0.12
PRPF4-201ENST00000374198 VGLL3A8MV65 326 aa15.79■□□□□ 0.12
PRPF4-201ENST00000374198 FKBP5Q13451 457 aaPredicted RBP15.79■□□□□ 0.12
PRPF4-201ENST00000374198 ZNF830Q96NB3 372 aaPredicted RBP15.79■□□□□ 0.12
PRPF4-201ENST00000374198 TSPY26PQ9H489 355 aa15.79■□□□□ 0.12
PRPF4-201ENST00000374198 TET3O43151 1660 aa15.78■□□□□ 0.12
PRPF4-201ENST00000374198 U2AF2P26368 475 aaKnown RBP eCLIP15.78■□□□□ 0.122e-8■■■■■ 36.5
PRPF4-201ENST00000374198 SPTLC3Q9NUV7 552 aa15.78■□□□□ 0.12
PRPF4-201ENST00000374198 SHPRHQ149N8 1683 aa15.78■□□□□ 0.12
PRPF4-201ENST00000374198 MBD3O95983 291 aa15.78■□□□□ 0.12
PRPF4-201ENST00000374198 ZNF771Q7L3S4 317 aaPredicted RBP15.78■□□□□ 0.12
PRPF4-201ENST00000374198 TMEM57Q8N5G2 664 aa15.78■□□□□ 0.12
PRPF4-201ENST00000374198 ZDHHC9Q9Y397 364 aa15.78■□□□□ 0.12
PRPF4-201ENST00000374198 ANKRD7Q92527 254 aa15.77■□□□□ 0.12
PRPF4-201ENST00000374198 FEZ1Q99689 392 aa15.77■□□□□ 0.11
PRPF4-201ENST00000374198 IQGAP3Q86VI3 1631 aa15.77■□□□□ 0.11
PRPF4-201ENST00000374198 SSH1Q8WYL5 1049 aa15.76■□□□□ 0.11
PRPF4-201ENST00000374198 ZBTB22O15209 634 aa15.76■□□□□ 0.11
PRPF4-201ENST00000374198 TAF7LQ5H9L4 462 aa15.76■□□□□ 0.11
PRPF4-201ENST00000374198 NCBP3Q53F19 620 aaKnown RBP15.75■□□□□ 0.11
PRPF4-201ENST00000374198 ANKRD45Q5TZF3 282 aa15.75■□□□□ 0.11
PRPF4-201ENST00000374198 C17orf53Q8N3J3 647 aaPredicted RBP15.75■□□□□ 0.11
PRPF4-201ENST00000374198 NOB1Q9ULX3 412 aaKnown RBP15.75■□□□□ 0.11
PRPF4-201ENST00000374198 CDC45O75419 566 aa15.75■□□□□ 0.11
PRPF4-201ENST00000374198 ANKLE2Q86XL3 938 aa15.75■□□□□ 0.11
PRPF4-201ENST00000374198 MPNDQ8N594 471 aa15.75■□□□□ 0.11
PRPF4-201ENST00000374198 IDI1Q13907 227 aa15.75■□□□□ 0.11
PRPF4-201ENST00000374198 ZGPATQ8N5A5 531 aaKnown RBP15.75■□□□□ 0.11
PRPF4-201ENST00000374198 KDM5AP29375 1690 aaKnown RBP15.75■□□□□ 0.11
PRPF4-201ENST00000374198 CDK11BP21127 795 aaKnown RBP15.74■□□□□ 0.11
PRPF4-201ENST00000374198 TSR2Q969E8 191 aaKnown RBP15.74■□□□□ 0.11
PRPF4-201ENST00000374198 CHAMP1Q96JM3 812 aa15.74■□□□□ 0.11
PRPF4-201ENST00000374198 TTC12Q9H892 705 aaPredicted RBP15.74■□□□□ 0.11
PRPF4-201ENST00000374198 OGFRQ9NZT2 677 aa15.74■□□□□ 0.11
PRPF4-201ENST00000374198 NOS1P29475 1434 aa15.74■□□□□ 0.11
PRPF4-201ENST00000374198 EXOSC9Q06265 439 aaKnown RBP15.74■□□□□ 0.11
PRPF4-201ENST00000374198 DIAPH3Q9NSV4 1193 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms