RNA–Protein interactions for RNA: ENST00000374022.3

GJB1-202, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-202ENST00000374022 COL14A1Q05707 1796 aaKnown RBP17.23■□□□□ 0.35
GJB1-202ENST00000374022 LMO7Q8WWI1 1683 aa17.23■□□□□ 0.35
GJB1-202ENST00000374022 CFAP53Q96M91 514 aa17.22■□□□□ 0.35
GJB1-202ENST00000374022 INSRP06213 1382 aa17.22■□□□□ 0.35
GJB1-202ENST00000374022 PLCH1Q4KWH8 1693 aa17.21■□□□□ 0.35
GJB1-202ENST00000374022 SPATA31A6Q5VVP1 1343 aa17.21■□□□□ 0.35
GJB1-202ENST00000374022 HOXC9P31274 260 aa17.21■□□□□ 0.35
GJB1-202ENST00000374022 NUTM2BA6NNL0 878 aaPredicted RBP17.2■□□□□ 0.34
GJB1-202ENST00000374022 NUTM2EB1AL46 878 aaPredicted RBP17.2■□□□□ 0.34
GJB1-202ENST00000374022 NUTM2AQ8IVF1 878 aaPredicted RBP17.2■□□□□ 0.34
GJB1-202ENST00000374022 IP6K1Q92551 441 aa17.2■□□□□ 0.34
GJB1-202ENST00000374022 PRDM11Q9NQV5 511 aa17.2■□□□□ 0.34
GJB1-202ENST00000374022 RGPD2P0DJD1 1756 aa17.2■□□□□ 0.34
GJB1-202ENST00000374022 BLMP54132 1417 aaPredicted RBP17.19■□□□□ 0.34
GJB1-202ENST00000374022 CHRNA2Q15822 529 aa17.19■□□□□ 0.34
GJB1-202ENST00000374022 HSP90AB2PQ58FF8 381 aa17.19■□□□□ 0.34
GJB1-202ENST00000374022 LRP6O75581 1613 aa17.19■□□□□ 0.34
GJB1-202ENST00000374022 FAM208AQ9UK61 1670 aaKnown RBP17.18■□□□□ 0.34
GJB1-202ENST00000374022 ADAMTS2O95450 1211 aa17.17■□□□□ 0.34
GJB1-202ENST00000374022 RGPD1P0DJD0 1748 aa17.17■□□□□ 0.34
GJB1-202ENST00000374022 NWD2Q9ULI1 1742 aa17.17■□□□□ 0.34
GJB1-202ENST00000374022 CAMTA1Q9Y6Y1 1673 aa17.17■□□□□ 0.34
GJB1-202ENST00000374022 DIAPH1O60610 1272 aaKnown RBP17.16■□□□□ 0.34
GJB1-202ENST00000374022 AXIN2Q9Y2T1 843 aa17.15■□□□□ 0.34
GJB1-202ENST00000374022 NRAPQ86VF7 1730 aa17.15■□□□□ 0.34
GJB1-202ENST00000374022 FAM83GA6ND36 823 aa17.15■□□□□ 0.34
GJB1-202ENST00000374022 EIF4A2Q14240 407 aaKnown RBP17.15■□□□□ 0.34
GJB1-202ENST00000374022 IL13P35225 146 aa17.13■□□□□ 0.33
GJB1-202ENST00000374022 PNISRQ8TF01 805 aaKnown RBP17.13■□□□□ 0.33
GJB1-202ENST00000374022 COL5A2P05997 1499 aaPredicted RBP17.13■□□□□ 0.33
GJB1-202ENST00000374022 LTV1Q96GA3 475 aaPredicted RBP17.13■□□□□ 0.33
GJB1-202ENST00000374022 NUDCQ9Y266 331 aa17.13■□□□□ 0.33
GJB1-202ENST00000374022 WDR43Q15061 677 aaKnown RBP eCLIP17.12■□□□□ 0.33
GJB1-202ENST00000374022 ANKRD24Q8TF21 1146 aa17.12■□□□□ 0.33
GJB1-202ENST00000374022 ERBB3P21860 1342 aa17.12■□□□□ 0.33
GJB1-202ENST00000374022 U2SURPO15042 1029 aaKnown RBP17.11■□□□□ 0.33
GJB1-202ENST00000374022 BTG4Q9NY30 223 aa17.1■□□□□ 0.33
GJB1-202ENST00000374022 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.1■□□□□ 0.33
GJB1-202ENST00000374022 SLIT2O94813 1529 aa17.1■□□□□ 0.33
GJB1-202ENST00000374022 MEX3CQ5U5Q3 659 aaKnown RBP17.09■□□□□ 0.33
GJB1-202ENST00000374022 FAM9BQ8IZU0 186 aa17.09■□□□□ 0.33
GJB1-202ENST00000374022 C8orf37Q96NL8 207 aa17.09■□□□□ 0.33
GJB1-202ENST00000374022 U2AF1L5P0DN76 240 aaPredicted RBP17.08■□□□□ 0.33
GJB1-202ENST00000374022 U2AF1Q01081 240 aaKnown RBP eCLIP17.08■□□□□ 0.33
GJB1-202ENST00000374022 GTF3C3Q9Y5Q9 886 aa17.08■□□□□ 0.33
GJB1-202ENST00000374022 CSB-PGBD3P0DP91 1061 aa17.08■□□□□ 0.32
GJB1-202ENST00000374022 EYA1Q99502 592 aa17.08■□□□□ 0.32
GJB1-202ENST00000374022 WDR17Q8IZU2 1322 aa17.07■□□□□ 0.32
GJB1-202ENST00000374022 IGSF1Q8N6C5 1336 aa17.07■□□□□ 0.32
GJB1-202ENST00000374022 NGLY1Q96IV0 654 aa17.07■□□□□ 0.32
GJB1-202ENST00000374022 STRN4Q9NRL3 753 aa17.07■□□□□ 0.32
GJB1-202ENST00000374022 ADAMTS8Q9UP79 889 aa17.07■□□□□ 0.32
GJB1-202ENST00000374022 EVA1CP58658 441 aa17.06■□□□□ 0.32
GJB1-202ENST00000374022 NCAPD2Q15021 1401 aa17.06■□□□□ 0.32
GJB1-202ENST00000374022 NBPF6Q5VWK0 638 aa17.06■□□□□ 0.32
GJB1-202ENST00000374022 NBPF4Q96M43 638 aa17.06■□□□□ 0.32
GJB1-202ENST00000374022 WNK3Q9BYP7 1800 aa17.05■□□□□ 0.32
GJB1-202ENST00000374022 CRB1P82279 1406 aa17.04■□□□□ 0.32
GJB1-202ENST00000374022 KDRP35968 1356 aa17.04■□□□□ 0.32
GJB1-202ENST00000374022 HMOX1P09601 288 aa17.04■□□□□ 0.32
GJB1-202ENST00000374022 FNBP4Q8N3X1 1017 aaPredicted RBP17.04■□□□□ 0.32
GJB1-202ENST00000374022 NLRP2Q9NX02 1062 aa17.04■□□□□ 0.32
GJB1-202ENST00000374022 SULT6B1Q6IMI4 303 aa17.04■□□□□ 0.32
GJB1-202ENST00000374022 LARP1Q6PKG0 1096 aaKnown RBP17.04■□□□□ 0.32
GJB1-202ENST00000374022 TOM1L2Q6ZVM7 507 aa17.04■□□□□ 0.32
GJB1-202ENST00000374022 AEBP1Q8IUX7 1158 aa17.04■□□□□ 0.32
GJB1-202ENST00000374022 USHBP1Q8N6Y0 703 aa17.04■□□□□ 0.32
GJB1-202ENST00000374022 BCL9LQ86UU0 1499 aa17.03■□□□□ 0.32
GJB1-202ENST00000374022 RSPH6AQ9H0K4 717 aa17.03■□□□□ 0.32
GJB1-202ENST00000374022 PARP4Q9UKK3 1724 aaKnown RBP17.02■□□□□ 0.32
GJB1-202ENST00000374022 FCHSD2O94868 740 aa17.02■□□□□ 0.31
GJB1-202ENST00000374022 UNC5CLQ8IV45 518 aa17.02■□□□□ 0.31
GJB1-202ENST00000374022 AFF2P51816 1311 aa17.01■□□□□ 0.31
GJB1-202ENST00000374022 CARD10Q9BWT7 1032 aa17.01■□□□□ 0.31
GJB1-202ENST00000374022 USP21Q9UK80 565 aa17.01■□□□□ 0.31
GJB1-202ENST00000374022 DLG5Q8TDM6 1919 aa17■□□□□ 0.31
GJB1-202ENST00000374022 PRKAR2BP31323 418 aa17■□□□□ 0.31
GJB1-202ENST00000374022 CCDC146Q8IYE0 955 aa17■□□□□ 0.31
GJB1-202ENST00000374022 PNNQ9H307 717 aaKnown RBP17■□□□□ 0.31
GJB1-202ENST00000374022 ILDR1Q86SU0 546 aaPredicted RBP16.99■□□□□ 0.31
GJB1-202ENST00000374022 PKD1L3Q7Z443 1732 aa16.98■□□□□ 0.31
GJB1-202ENST00000374022 RUNDC1Q96C34 613 aa16.98■□□□□ 0.31
GJB1-202ENST00000374022 PLEKHF1Q96S99 279 aa16.98■□□□□ 0.31
GJB1-202ENST00000374022 MEGF6O75095 1541 aa16.97■□□□□ 0.31
GJB1-202ENST00000374022 VPS72Q15906 364 aa16.97■□□□□ 0.31
GJB1-202ENST00000374022 USP35Q9P2H5 1018 aa16.97■□□□□ 0.31
GJB1-202ENST00000374022 SPATA31A1Q5TZJ5 1347 aa16.97■□□□□ 0.31
GJB1-202ENST00000374022 SPATA31A5Q5VU36 1347 aa16.97■□□□□ 0.31
GJB1-202ENST00000374022 SPATA31A7Q8IWB4 1347 aa16.97■□□□□ 0.31
GJB1-202ENST00000374022 MAPK8IP3Q9UPT6 1336 aa16.97■□□□□ 0.31
GJB1-202ENST00000374022 NEFMP07197 916 aa16.96■□□□□ 0.3
GJB1-202ENST00000374022 CCDC9Q9Y3X0 531 aaKnown RBP16.96■□□□□ 0.3
GJB1-202ENST00000374022 VIRMAQ69YN4 1812 aaKnown RBP16.95■□□□□ 0.3
GJB1-202ENST00000374022 RAPGEF4Q8WZA2 1011 aa16.95■□□□□ 0.3
GJB1-202ENST00000374022 ATRNO75882 1429 aa16.95■□□□□ 0.3
GJB1-202ENST00000374022 SHANK3Q9BYB0 1731 aa16.95■□□□□ 0.3
GJB1-202ENST00000374022 GLI3P10071 1580 aa16.94■□□□□ 0.3
GJB1-202ENST00000374022 TCP11L2Q8N4U5 519 aa16.94■□□□□ 0.3
GJB1-202ENST00000374022 PHACTR3Q96KR7 559 aa16.94■□□□□ 0.3
GJB1-202ENST00000374022 PLEKHG2Q9H7P9 1386 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms