RNA–Protein interactions for RNA: ENST00000373826.3

RAB42-201, Transcript of RAB42, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB42, Length 1,950 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42-201ENST00000373826 R3HCC1Q9Y3T6 440 aaKnown RBP16.46■□□□□ 0.23
RAB42-201ENST00000373826 TULP4Q9NRJ4 1543 aa16.46■□□□□ 0.22
RAB42-201ENST00000373826 PPIP5K1Q6PFW1 1433 aa16.46■□□□□ 0.22
RAB42-201ENST00000373826 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.22
RAB42-201ENST00000373826 LMBRD1Q9NUN5 540 aa16.46■□□□□ 0.22
RAB42-201ENST00000373826 CWC22Q9HCG8 908 aaKnown RBP16.45■□□□□ 0.22
RAB42-201ENST00000373826 SIGLEC1Q9BZZ2 1709 aa16.45■□□□□ 0.22
RAB42-201ENST00000373826 COL3A1P02461 1466 aaPredicted RBP16.45■□□□□ 0.22
RAB42-201ENST00000373826 PIK3R4Q99570 1358 aa16.44■□□□□ 0.22
RAB42-201ENST00000373826 DYNC1I1O14576 645 aa16.44■□□□□ 0.22
RAB42-201ENST00000373826 RBM10P98175 930 aaKnown RBP16.44■□□□□ 0.22
RAB42-201ENST00000373826 MCTP1Q6DN14 999 aa16.44■□□□□ 0.22
RAB42-201ENST00000373826 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.44■□□□□ 0.22
RAB42-201ENST00000373826 NEXMIFQ5QGS0 1516 aa16.44■□□□□ 0.22
RAB42-201ENST00000373826 ZBTB7BO15156 539 aaPredicted RBP16.44■□□□□ 0.22
RAB42-201ENST00000373826 CAVIN1Q6NZI2 390 aaKnown RBP16.44■□□□□ 0.22
RAB42-201ENST00000373826 GGT6Q6P531 493 aa16.44■□□□□ 0.22
RAB42-201ENST00000373826 RBSNQ9H1K0 784 aa16.44■□□□□ 0.22
RAB42-201ENST00000373826 PRDM4Q9UKN5 801 aa16.44■□□□□ 0.22
RAB42-201ENST00000373826 ZKSCAN5Q9Y2L8 839 aa16.44■□□□□ 0.22
RAB42-201ENST00000373826 ARHGAP45Q92619 1136 aa16.43■□□□□ 0.22
RAB42-201ENST00000373826 EVC2Q86UK5 1308 aa16.42■□□□□ 0.22
RAB42-201ENST00000373826 FAM13BQ9NYF5 915 aa16.42■□□□□ 0.22
RAB42-201ENST00000373826 UQCRHLA0A096LP55 91 aa16.42■□□□□ 0.22
RAB42-201ENST00000373826 U2SURPO15042 1029 aaKnown RBP16.42■□□□□ 0.22
RAB42-201ENST00000373826 UQCRHP07919 91 aa16.42■□□□□ 0.22
RAB42-201ENST00000373826 NCLP19338 710 aaKnown RBP16.41■□□□□ 0.22
RAB42-201ENST00000373826 CCDC39Q9UFE4 941 aa16.41■□□□□ 0.22
RAB42-201ENST00000373826 PTCH1Q13635 1447 aa16.4■□□□□ 0.22
RAB42-201ENST00000373826 SMAP1Q8IYB5 467 aaPredicted RBP16.4■□□□□ 0.22
RAB42-201ENST00000373826 VGFO15240 615 aaPredicted RBP16.39■□□□□ 0.21
RAB42-201ENST00000373826 XPCQ01831 940 aaPredicted RBP16.39■□□□□ 0.21
RAB42-201ENST00000373826 SASS6Q6UVJ0 657 aa16.39■□□□□ 0.21
RAB42-201ENST00000373826 NPM1P06748 294 aaKnown RBP eCLIP16.38■□□□□ 0.21
RAB42-201ENST00000373826 PRIM1P49642 420 aaKnown RBP16.38■□□□□ 0.21
RAB42-201ENST00000373826 LRSAM1Q6UWE0 723 aa16.38■□□□□ 0.21
RAB42-201ENST00000373826 ZFYVE9O95405 1425 aa16.37■□□□□ 0.21
RAB42-201ENST00000373826 SIRT2Q8IXJ6 389 aa16.37■□□□□ 0.21
RAB42-201ENST00000373826 MRPL50Q8N5N7 158 aaKnown RBP16.37■□□□□ 0.21
RAB42-201ENST00000373826 USP26Q9BXU7 913 aa16.37■□□□□ 0.21
RAB42-201ENST00000373826 GSPT1P15170 499 aaKnown RBP16.36■□□□□ 0.21
RAB42-201ENST00000373826 GPT2Q8TD30 523 aa16.36■□□□□ 0.21
RAB42-201ENST00000373826 ABCC4O15439 1325 aa16.36■□□□□ 0.21
RAB42-201ENST00000373826 DIP2CQ9Y2E4 1556 aa16.35■□□□□ 0.21
RAB42-201ENST00000373826 KIF24Q5T7B8 1368 aa16.35■□□□□ 0.21
RAB42-201ENST00000373826 ST18O60284 1047 aa16.35■□□□□ 0.21
RAB42-201ENST00000373826 PRPF40AO75400 957 aaKnown RBP16.35■□□□□ 0.21
RAB42-201ENST00000373826 PLEKHM2Q8IWE5 1019 aa16.35■□□□□ 0.21
RAB42-201ENST00000373826 CABP2Q9NPB3 220 aa16.35■□□□□ 0.21
RAB42-201ENST00000373826 NEO1Q92859 1461 aa16.34■□□□□ 0.21
RAB42-201ENST00000373826 MBD3O95983 291 aa16.34■□□□□ 0.21
RAB42-201ENST00000373826 TTC22Q5TAA0 569 aa16.34■□□□□ 0.21
RAB42-201ENST00000373826 INTS3Q68E01 1043 aaKnown RBP16.34■□□□□ 0.21
RAB42-201ENST00000373826 C1orf115Q9H7X2 142 aa16.34■□□□□ 0.21
RAB42-201ENST00000373826 ANKRD26Q9UPS8 1709 aa16.34■□□□□ 0.21
RAB42-201ENST00000373826 PNPLA6Q8IY17 1366 aa16.34■□□□□ 0.21
RAB42-201ENST00000373826 DIAPH1O60610 1272 aaKnown RBP16.33■□□□□ 0.21
RAB42-201ENST00000373826 NUTM2DQ5VT03 806 aaPredicted RBP16.33■□□□□ 0.21
RAB42-201ENST00000373826 A0A1W2PP64 1363 aa16.33■□□□□ 0.2
RAB42-201ENST00000373826 VAMP4O75379 141 aa16.33■□□□□ 0.2
RAB42-201ENST00000373826 FCHSD2O94868 740 aa16.33■□□□□ 0.2
RAB42-201ENST00000373826 RBM27Q9P2N5 1060 aaKnown RBP16.33■□□□□ 0.2
RAB42-201ENST00000373826 CDC42BPGQ6DT37 1551 aa16.33■□□□□ 0.2
RAB42-201ENST00000373826 YEATS2Q9ULM3 1422 aa16.32■□□□□ 0.2
RAB42-201ENST00000373826 PKP1Q13835 747 aa16.32■□□□□ 0.2
RAB42-201ENST00000373826 CLTCQ00610 1675 aaKnown RBP16.31■□□□□ 0.2
RAB42-201ENST00000373826 TMEM63CQ9P1W3 806 aa16.31■□□□□ 0.2
RAB42-201ENST00000373826 ZDHHC9Q9Y397 364 aa16.31■□□□□ 0.2
RAB42-201ENST00000373826 IDI1Q13907 227 aa16.31■□□□□ 0.2
RAB42-201ENST00000373826 CASC1Q6TDU7 716 aa16.31■□□□□ 0.2
RAB42-201ENST00000373826 DCTPP1Q9H773 170 aa16.31■□□□□ 0.2
RAB42-201ENST00000373826 API5Q9BZZ5 524 aaKnown RBP16.3■□□□□ 0.2
RAB42-201ENST00000373826 PTPRMP28827 1452 aa16.3■□□□□ 0.2
RAB42-201ENST00000373826 MYO5BQ9ULV0 1848 aa16.3■□□□□ 0.2
RAB42-201ENST00000373826 SYCE3A1L190 88 aa16.29■□□□□ 0.2
RAB42-201ENST00000373826 KIAA2012Q0VF49 1180 aa16.29■□□□□ 0.2
RAB42-201ENST00000373826 CCDC94Q9BW85 323 aaPredicted RBP16.29■□□□□ 0.2
RAB42-201ENST00000373826 GGNBP2Q9H3C7 697 aa16.29■□□□□ 0.2
RAB42-201ENST00000373826 FAM135BQ49AJ0 1406 aa16.29■□□□□ 0.2
RAB42-201ENST00000373826 RAPGEF3O95398 923 aa16.29■□□□□ 0.2
RAB42-201ENST00000373826 UTP14CQ5TAP6 766 aaKnown RBP16.29■□□□□ 0.2
RAB42-201ENST00000373826 SLC52A1Q9NWF4 448 aa16.29■□□□□ 0.2
RAB42-201ENST00000373826 TMEM131LA2VDJ0 1609 aa16.28■□□□□ 0.2
RAB42-201ENST00000373826 CD163L1Q9NR16 1453 aa16.28■□□□□ 0.2
RAB42-201ENST00000373826 ATAD2Q6PL18 1390 aa16.28■□□□□ 0.2
RAB42-201ENST00000373826 ZGPATQ8N5A5 531 aaKnown RBP16.28■□□□□ 0.2
RAB42-201ENST00000373826 MYRIPQ8NFW9 859 aa16.28■□□□□ 0.2
RAB42-201ENST00000373826 RICTORQ6R327 1708 aa16.28■□□□□ 0.2
RAB42-201ENST00000373826 FYB1O15117 783 aa16.27■□□□□ 0.2
RAB42-201ENST00000373826 REC8O95072 547 aa16.27■□□□□ 0.2
RAB42-201ENST00000373826 GNAI1P63096 354 aa16.27■□□□□ 0.2
RAB42-201ENST00000373826 IFT57Q9NWB7 429 aa16.27■□□□□ 0.2
RAB42-201ENST00000373826 LRRC7Q96NW7 1537 aa16.27■□□□□ 0.2
RAB42-201ENST00000373826 PREX1Q8TCU6 1659 aa16.27■□□□□ 0.2
RAB42-201ENST00000373826 SAFB2Q14151 953 aaKnown RBP eCLIP16.27■□□□□ 0.19
RAB42-201ENST00000373826 SYAP1Q96A49 352 aaPredicted RBP16.27■□□□□ 0.19
RAB42-201ENST00000373826 PRIMPOLQ96LW4 560 aa16.27■□□□□ 0.19
RAB42-201ENST00000373826 TSPY26PQ9H489 355 aa16.27■□□□□ 0.19
RAB42-201ENST00000373826 TERF2IPQ9NYB0 399 aa16.27■□□□□ 0.19
RAB42-201ENST00000373826 NFE2L2Q16236 605 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms