RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 KIF20BQ96Q89 1820 aa13.12□□□□□ -0.31
ITM2A-201ENST00000373298 NLRP6P59044 892 aa13.12□□□□□ -0.31
ITM2A-201ENST00000373298 CNGB1Q14028 1251 aaPredicted RBP13.12□□□□□ -0.31
ITM2A-201ENST00000373298 PHRF1Q9P1Y6 1649 aaKnown RBP13.11□□□□□ -0.31
ITM2A-201ENST00000373298 SOX12O15370 315 aa13.11□□□□□ -0.31
ITM2A-201ENST00000373298 ARHGEF10O15013 1369 aa13.11□□□□□ -0.31
ITM2A-201ENST00000373298 TTC21AQ8NDW8 1320 aa13.11□□□□□ -0.31
ITM2A-201ENST00000373298 OVOS2A0A0J9YW53 1432 aa13.1□□□□□ -0.31
ITM2A-201ENST00000373298 OVOS2Q6IE36 1432 aa13.1□□□□□ -0.31
ITM2A-201ENST00000373298 ADAMTS2O95450 1211 aa13.1□□□□□ -0.31
ITM2A-201ENST00000373298 AMER1Q5JTC6 1135 aaPredicted RBP13.1□□□□□ -0.31
ITM2A-201ENST00000373298 USP19O94966 1318 aa13.09□□□□□ -0.31
ITM2A-201ENST00000373298 USP54Q70EL1 1684 aa13.09□□□□□ -0.31
ITM2A-201ENST00000373298 BRD4O60885 1362 aaPredicted RBP13.09□□□□□ -0.31
ITM2A-201ENST00000373298 USP31Q70CQ4 1352 aa13.08□□□□□ -0.32
ITM2A-201ENST00000373298 SLIT3O75094 1523 aa13.08□□□□□ -0.32
ITM2A-201ENST00000373298 ZC3H6P61129 1189 aaKnown RBP13.08□□□□□ -0.32
ITM2A-201ENST00000373298 NFAT5O94916 1531 aa13.07□□□□□ -0.32
ITM2A-201ENST00000373298 NLRP13Q86W25 1043 aa13.07□□□□□ -0.32
ITM2A-201ENST00000373298 GCP02774 474 aa13.06□□□□□ -0.32
ITM2A-201ENST00000373298 CC2D1BQ5T0F9 858 aaKnown RBP13.06□□□□□ -0.32
ITM2A-201ENST00000373298 KNSTRNQ9Y448 316 aa13.06□□□□□ -0.32
ITM2A-201ENST00000373298 CGNL1Q0VF96 1302 aa13.06□□□□□ -0.32
ITM2A-201ENST00000373298 SPATA31A6Q5VVP1 1343 aa13.06□□□□□ -0.32
ITM2A-201ENST00000373298 GALR2O43603 387 aaPredicted RBP13.06□□□□□ -0.32
ITM2A-201ENST00000373298 TNNT2P45379 298 aaPredicted RBP13.06□□□□□ -0.32
ITM2A-201ENST00000373298 CHRNA2Q15822 529 aa13.06□□□□□ -0.32
ITM2A-201ENST00000373298 ANKRD26Q9UPS8 1709 aa13.05□□□□□ -0.32
ITM2A-201ENST00000373298 KIAA0232Q92628 1395 aa13.05□□□□□ -0.32
ITM2A-201ENST00000373298 FAM83GA6ND36 823 aa13.05□□□□□ -0.32
ITM2A-201ENST00000373298 COG3Q96JB2 828 aa13.04□□□□□ -0.32
ITM2A-201ENST00000373298 LTN1O94822 1766 aa13.04□□□□□ -0.32
ITM2A-201ENST00000373298 RGPD5Q99666 1765 aa13.04□□□□□ -0.32
ITM2A-201ENST00000373298 ZBTB7CA1YPR0 619 aa13.03□□□□□ -0.32
ITM2A-201ENST00000373298 HAP1P54257 671 aaPredicted RBP13.03□□□□□ -0.32
ITM2A-201ENST00000373298 RRS1Q15050 365 aaKnown RBP13.03□□□□□ -0.32
ITM2A-201ENST00000373298 C8orf37Q96NL8 207 aa13.03□□□□□ -0.32
ITM2A-201ENST00000373298 COL18A1P39060 1754 aa13.02□□□□□ -0.32
ITM2A-201ENST00000373298 AXIN2Q9Y2T1 843 aa13.02□□□□□ -0.32
ITM2A-201ENST00000373298 MAP2P11137 1827 aaKnown RBP13.02□□□□□ -0.32
ITM2A-201ENST00000373298 PEAK1Q9H792 1746 aa13.02□□□□□ -0.33
ITM2A-201ENST00000373298 PLCH1Q4KWH8 1693 aa13.01□□□□□ -0.33
ITM2A-201ENST00000373298 ARHGEF25Q86VW2 580 aa13.01□□□□□ -0.33
ITM2A-201ENST00000373298 RGS17Q9UGC6 210 aaPredicted RBP13.01□□□□□ -0.33
ITM2A-201ENST00000373298 MAP3K19Q56UN5 1328 aa13.01□□□□□ -0.33
ITM2A-201ENST00000373298 LMO7Q8WWI1 1683 aa13□□□□□ -0.33
ITM2A-201ENST00000373298 CAMTA1Q9Y6Y1 1673 aa13□□□□□ -0.33
ITM2A-201ENST00000373298 MEX3CQ5U5Q3 659 aaKnown RBP13□□□□□ -0.33
ITM2A-201ENST00000373298 MORC1Q86VD1 984 aa13□□□□□ -0.33
ITM2A-201ENST00000373298 PRDM11Q9NQV5 511 aa13□□□□□ -0.33
ITM2A-201ENST00000373298 EMILIN1Q9Y6C2 1016 aa13□□□□□ -0.33
ITM2A-201ENST00000373298 CPDO75976 1380 aa12.99□□□□□ -0.33
ITM2A-201ENST00000373298 NGLY1Q96IV0 654 aa12.99□□□□□ -0.33
ITM2A-201ENST00000373298 BCL9LQ86UU0 1499 aa12.99□□□□□ -0.33
ITM2A-201ENST00000373298 AFF2P51816 1311 aa12.99□□□□□ -0.33
ITM2A-201ENST00000373298 KCNH5Q8NCM2 988 aa12.99□□□□□ -0.33
ITM2A-201ENST00000373298 POLKQ9UBT6 870 aa12.99□□□□□ -0.33
ITM2A-201ENST00000373298 COL14A1Q05707 1796 aaKnown RBP12.98□□□□□ -0.33
ITM2A-201ENST00000373298 NSD2O96028 1365 aa12.98□□□□□ -0.33
ITM2A-201ENST00000373298 NPC1L1Q9UHC9 1359 aa12.98□□□□□ -0.33
ITM2A-201ENST00000373298 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
ITM2A-201ENST00000373298 BTG4Q9NY30 223 aa12.98□□□□□ -0.33
ITM2A-201ENST00000373298 SLIT2O94813 1529 aa12.98□□□□□ -0.33
ITM2A-201ENST00000373298 NRAPQ86VF7 1730 aa12.97□□□□□ -0.33
ITM2A-201ENST00000373298 OTUD5Q96G74 571 aa12.97□□□□□ -0.33
ITM2A-201ENST00000373298 EP400Q96L91 3159 aa12.97□□□□□ -0.33
ITM2A-201ENST00000373298 HSP90AB2PQ58FF8 381 aa12.96□□□□□ -0.33
ITM2A-201ENST00000373298 FNBP4Q8N3X1 1017 aaPredicted RBP12.96□□□□□ -0.33
ITM2A-201ENST00000373298 PPM1GO15355 546 aaPredicted RBP12.95□□□□□ -0.34
ITM2A-201ENST00000373298 RGPD2P0DJD1 1756 aa12.95□□□□□ -0.34
ITM2A-201ENST00000373298 AATKQ6ZMQ8 1374 aa12.95□□□□□ -0.34
ITM2A-201ENST00000373298 PARD3Q8TEW0 1356 aa12.95□□□□□ -0.34
ITM2A-201ENST00000373298 POTEB2H3BUK9 544 aa12.95□□□□□ -0.34
ITM2A-201ENST00000373298 HOXC9P31274 260 aa12.95□□□□□ -0.34
ITM2A-201ENST00000373298 USP21Q9UK80 565 aa12.95□□□□□ -0.34
ITM2A-201ENST00000373298 NWD2Q9ULI1 1742 aa12.94□□□□□ -0.34
ITM2A-201ENST00000373298 COL5A2P05997 1499 aaPredicted RBP12.94□□□□□ -0.34
ITM2A-201ENST00000373298 MNX1P50219 401 aaPredicted RBP12.94□□□□□ -0.34
ITM2A-201ENST00000373298 POTEAQ6S8J7 498 aa12.94□□□□□ -0.34
ITM2A-201ENST00000373298 LTV1Q96GA3 475 aaPredicted RBP12.94□□□□□ -0.34
ITM2A-201ENST00000373298 PHF12Q96QT6 1004 aa12.94□□□□□ -0.34
ITM2A-201ENST00000373298 STRN4Q9NRL3 753 aa12.94□□□□□ -0.34
ITM2A-201ENST00000373298 PPP2R1AP30153 589 aa12.93□□□□□ -0.34
ITM2A-201ENST00000373298 MTHFSP49914 203 aa12.93□□□□□ -0.34
ITM2A-201ENST00000373298 LARP1Q6PKG0 1096 aaKnown RBP12.93□□□□□ -0.34
ITM2A-201ENST00000373298 IP6K1Q92551 441 aa12.93□□□□□ -0.34
ITM2A-201ENST00000373298 AMPHP49418 695 aa12.92□□□□□ -0.34
ITM2A-201ENST00000373298 UNC5CLQ8IV45 518 aa12.92□□□□□ -0.34
ITM2A-201ENST00000373298 SMG6Q86US8 1419 aaKnown RBP12.92□□□□□ -0.34
ITM2A-201ENST00000373298 PRKRIP1Q9H875 184 aaPredicted RBP12.91□□□□□ -0.34
ITM2A-201ENST00000373298 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.91□□□□□ -0.34
ITM2A-201ENST00000373298 ANKRD24Q8TF21 1146 aa12.91□□□□□ -0.34
ITM2A-201ENST00000373298 ATRNO75882 1429 aa12.9□□□□□ -0.34
ITM2A-201ENST00000373298 ERBB3P21860 1342 aa12.9□□□□□ -0.34
ITM2A-201ENST00000373298 GLI3P10071 1580 aa12.9□□□□□ -0.34
ITM2A-201ENST00000373298 FLT4P35916 1363 aa12.9□□□□□ -0.34
ITM2A-201ENST00000373298 QTRT2Q9H974 415 aaKnown RBP12.9□□□□□ -0.34
ITM2A-201ENST00000373298 USP35Q9P2H5 1018 aa12.9□□□□□ -0.34
ITM2A-201ENST00000373298 INSRP06213 1382 aa12.89□□□□□ -0.35
ITM2A-201ENST00000373298 CCDC184Q52MB2 194 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms