RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 AKAP12Q02952 1782 aa13.6□□□□□ -0.23
LCN2-202ENST00000372998 CPSF1Q10570 1443 aaKnown RBP13.6□□□□□ -0.23
LCN2-202ENST00000372998 TNNQ9UQP3 1299 aa13.6□□□□□ -0.23
LCN2-202ENST00000372998 RIMBP3CA6NJZ7 1639 aa13.6□□□□□ -0.23
LCN2-202ENST00000372998 RIMBP3BA6NNM3 1639 aa13.6□□□□□ -0.23
LCN2-202ENST00000372998 RIMBP3Q9UFD9 1639 aa13.6□□□□□ -0.23
LCN2-202ENST00000372998 RIMS2Q9UQ26 1411 aa13.59□□□□□ -0.23
LCN2-202ENST00000372998 PRKAR2BP31323 418 aa13.59□□□□□ -0.23
LCN2-202ENST00000372998 CABP1Q9NZU7 370 aa13.59□□□□□ -0.23
LCN2-202ENST00000372998 BRPF3Q9ULD4 1205 aa13.59□□□□□ -0.23
LCN2-202ENST00000372998 YEATS2Q9ULM3 1422 aa13.58□□□□□ -0.24
LCN2-202ENST00000372998 GOLGA6L22H0YM25 854 aa13.58□□□□□ -0.24
LCN2-202ENST00000372998 MRE11P49959 708 aa13.58□□□□□ -0.24
LCN2-202ENST00000372998 SAFB2Q14151 953 aaKnown RBP eCLIP13.58□□□□□ -0.24
LCN2-202ENST00000372998 MRPL50Q8N5N7 158 aaKnown RBP13.58□□□□□ -0.24
LCN2-202ENST00000372998 POLKQ9UBT6 870 aa13.58□□□□□ -0.24
LCN2-202ENST00000372998 A2ML1A8K2U0 1454 aa13.58□□□□□ -0.24
LCN2-202ENST00000372998 ABCC4O15439 1325 aa13.58□□□□□ -0.24
LCN2-202ENST00000372998 TECPR2O15040 1411 aa13.57□□□□□ -0.24
LCN2-202ENST00000372998 ZBTB7BO15156 539 aaPredicted RBP13.57□□□□□ -0.24
LCN2-202ENST00000372998 VAMP4O75379 141 aa13.57□□□□□ -0.24
LCN2-202ENST00000372998 HSP90AB1P08238 724 aaKnown RBP13.57□□□□□ -0.24
LCN2-202ENST00000372998 ZNF853P0CG23 659 aa13.57□□□□□ -0.24
LCN2-202ENST00000372998 CASC1Q6TDU7 716 aa13.57□□□□□ -0.24
LCN2-202ENST00000372998 NRKQ7Z2Y5 1582 aa13.57□□□□□ -0.24
LCN2-202ENST00000372998 FSD2A1L4K1 749 aa13.56□□□□□ -0.24
LCN2-202ENST00000372998 CDC45O75419 566 aa13.56□□□□□ -0.24
LCN2-202ENST00000372998 NUTM2DQ5VT03 806 aaPredicted RBP13.56□□□□□ -0.24
LCN2-202ENST00000372998 COG3Q96JB2 828 aa13.56□□□□□ -0.24
LCN2-202ENST00000372998 DLG5Q8TDM6 1919 aa13.56□□□□□ -0.24
LCN2-202ENST00000372998 CPS1P31327 1500 aa13.55□□□□□ -0.24
LCN2-202ENST00000372998 WASLO00401 505 aaPredicted RBP13.55□□□□□ -0.24
LCN2-202ENST00000372998 TRAK2O60296 914 aa13.55□□□□□ -0.24
LCN2-202ENST00000372998 C3P01024 1663 aa13.54□□□□□ -0.24
LCN2-202ENST00000372998 IL13P35225 146 aa13.54□□□□□ -0.24
LCN2-202ENST00000372998 TWISTNBQ3B726 338 aaPredicted RBP13.54□□□□□ -0.24
LCN2-202ENST00000372998 ANKRD45Q5TZF3 282 aa13.54□□□□□ -0.24
LCN2-202ENST00000372998 RPAP2Q8IXW5 612 aaPredicted RBP13.54□□□□□ -0.24
LCN2-202ENST00000372998 KIAA0232Q92628 1395 aa13.54□□□□□ -0.24
LCN2-202ENST00000372998 HSP90AA1P07900 732 aaKnown RBP13.53□□□□□ -0.24
LCN2-202ENST00000372998 LNPKQ9C0E8 428 aa13.53□□□□□ -0.24
LCN2-202ENST00000372998 PTPRCP08575 1304 aa13.53□□□□□ -0.24
LCN2-202ENST00000372998 K7ELQ4 463 aaPredicted RBP13.52□□□□□ -0.25
LCN2-202ENST00000372998 DDIT3P35638 169 aa13.52□□□□□ -0.25
LCN2-202ENST00000372998 RABEP1Q15276 862 aa13.52□□□□□ -0.25
LCN2-202ENST00000372998 CCDC61Q9Y6R9 512 aa13.52□□□□□ -0.25
LCN2-202ENST00000372998 SOS1Q07889 1333 aaPredicted RBP13.51□□□□□ -0.25
LCN2-202ENST00000372998 INTS3Q68E01 1043 aaKnown RBP13.51□□□□□ -0.25
LCN2-202ENST00000372998 CLEC17AQ6ZS10 378 aa13.51□□□□□ -0.25
LCN2-202ENST00000372998 DIP2BQ9P265 1576 aa13.5□□□□□ -0.25
LCN2-202ENST00000372998 IBTKQ9P2D0 1353 aaPredicted RBP13.5□□□□□ -0.25
LCN2-202ENST00000372998 HMMRO75330 724 aa13.5□□□□□ -0.25
LCN2-202ENST00000372998 NUCB2P80303 420 aa13.5□□□□□ -0.25
LCN2-202ENST00000372998 RAB3GAP1Q15042 981 aa13.5□□□□□ -0.25
LCN2-202ENST00000372998 RTN4Q9NQC3 1192 aaKnown RBP13.5□□□□□ -0.25
LCN2-202ENST00000372998 NRXN3Q9Y4C0 1643 aa13.5□□□□□ -0.25
LCN2-202ENST00000372998 TTC21BQ7Z4L5 1316 aa13.49□□□□□ -0.25
LCN2-202ENST00000372998 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.49□□□□□ -0.25
LCN2-202ENST00000372998 ANP32BQ92688 251 aaKnown RBP13.49□□□□□ -0.25
LCN2-202ENST00000372998 DCTPP1Q9H773 170 aa13.49□□□□□ -0.25
LCN2-202ENST00000372998 CWC22Q9HCG8 908 aaKnown RBP13.49□□□□□ -0.25
LCN2-202ENST00000372998 MBIPQ9NS73 344 aa13.49□□□□□ -0.25
LCN2-202ENST00000372998 NUDT16Q96DE0 195 aaKnown RBP13.48□□□□□ -0.25
LCN2-202ENST00000372998 ESF1Q9H501 851 aaKnown RBP13.48□□□□□ -0.25
LCN2-202ENST00000372998 CACNA1FO60840 1977 aa13.48□□□□□ -0.25
LCN2-202ENST00000372998 NALCNQ8IZF0 1738 aa13.47□□□□□ -0.25
LCN2-202ENST00000372998 REC8O95072 547 aa13.47□□□□□ -0.25
LCN2-202ENST00000372998 TBC1D9Q6ZT07 1266 aa13.47□□□□□ -0.25
LCN2-202ENST00000372998 ANKRD44Q8N8A2 993 aa13.47□□□□□ -0.25
LCN2-202ENST00000372998 CHMP4AQ9BY43 222 aa13.47□□□□□ -0.25
LCN2-202ENST00000372998 TOPAZ1Q8N9V7 1692 aa13.47□□□□□ -0.25
LCN2-202ENST00000372998 FBXO31Q5XUX0 539 aaPredicted RBP13.46□□□□□ -0.25
LCN2-202ENST00000372998 GRPEL1Q9HAV7 217 aa13.46□□□□□ -0.25
LCN2-202ENST00000372998 ARHGEF10O15013 1369 aa13.45□□□□□ -0.26
LCN2-202ENST00000372998 ST18O60284 1047 aa13.45□□□□□ -0.26
LCN2-202ENST00000372998 HMOX1P09601 288 aa13.45□□□□□ -0.26
LCN2-202ENST00000372998 XRCC6P12956 609 aaKnown RBP eCLIP13.45□□□□□ -0.26
LCN2-202ENST00000372998 MCM2P49736 904 aa13.45□□□□□ -0.26
LCN2-202ENST00000372998 PLPPR3Q6T4P5 718 aa13.45□□□□□ -0.26
LCN2-202ENST00000372998 TNPO1Q92973 898 aaKnown RBP13.45□□□□□ -0.26
LCN2-202ENST00000372998 PHACTR3Q96KR7 559 aa13.45□□□□□ -0.26
LCN2-202ENST00000372998 TTC21AQ8NDW8 1320 aa13.44□□□□□ -0.26
LCN2-202ENST00000372998 EPB41L2O43491 1005 aaKnown RBP13.44□□□□□ -0.26
LCN2-202ENST00000372998 HTATSF1O43719 755 aaKnown RBP13.44□□□□□ -0.26
LCN2-202ENST00000372998 CLCN1P35523 988 aa13.44□□□□□ -0.26
LCN2-202ENST00000372998 CCT4P50991 539 aaKnown RBP13.44□□□□□ -0.26
LCN2-202ENST00000372998 TTC22Q5TAA0 569 aa13.44□□□□□ -0.26
LCN2-202ENST00000372998 TRIM44Q96DX7 344 aaPredicted RBP13.44□□□□□ -0.26
LCN2-202ENST00000372998 RGPD1P0DJD0 1748 aa13.44□□□□□ -0.26
LCN2-202ENST00000372998 PLEKHG3A1L390 1219 aa13.43□□□□□ -0.26
LCN2-202ENST00000372998 CHL1O00533 1208 aa13.43□□□□□ -0.26
LCN2-202ENST00000372998 WAPLQ7Z5K2 1190 aa13.43□□□□□ -0.26
LCN2-202ENST00000372998 FMN2Q9NZ56 1722 aa13.43□□□□□ -0.26
LCN2-202ENST00000372998 EMILIN1Q9Y6C2 1016 aa13.43□□□□□ -0.26
LCN2-202ENST00000372998 RIMS1Q86UR5 1692 aaKnown RBP13.43□□□□□ -0.26
LCN2-202ENST00000372998 RTL1A6NKG5 1358 aa13.43□□□□□ -0.26
LCN2-202ENST00000372998 NME9Q86XW9 330 aa13.42□□□□□ -0.26
LCN2-202ENST00000372998 PLEKHM2Q8IWE5 1019 aa13.42□□□□□ -0.26
LCN2-202ENST00000372998 SPRYD3Q8NCJ5 442 aa13.42□□□□□ -0.26
LCN2-202ENST00000372998 BABAM1Q9NWV8 329 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms