RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 PTPN23Q9H3S7 1636 aa16.77■□□□□ 0.28
RAPGEF1-202ENST00000372190 LRPPRCP42704 1394 aaKnown RBP16.77■□□□□ 0.28
RAPGEF1-202ENST00000372190 TNRQ92752 1358 aa16.77■□□□□ 0.28
RAPGEF1-202ENST00000372190 SASS6Q6UVJ0 657 aa16.77■□□□□ 0.27
RAPGEF1-202ENST00000372190 IL27Q8NEV9 243 aa16.77■□□□□ 0.27
RAPGEF1-202ENST00000372190 CCDC47Q96A33 483 aaKnown RBP16.77■□□□□ 0.27
RAPGEF1-202ENST00000372190 CAVIN1Q6NZI2 390 aaKnown RBP16.76■□□□□ 0.27
RAPGEF1-202ENST00000372190 UQCRHLA0A096LP55 91 aa16.76■□□□□ 0.27
RAPGEF1-202ENST00000372190 UQCRHP07919 91 aa16.76■□□□□ 0.27
RAPGEF1-202ENST00000372190 FAM184AQ8NB25 1140 aa16.76■□□□□ 0.27
RAPGEF1-202ENST00000372190 CCDC61Q9Y6R9 512 aa16.76■□□□□ 0.27
RAPGEF1-202ENST00000372190 ERLIN1O75477 346 aa16.75■□□□□ 0.27
RAPGEF1-202ENST00000372190 NF2P35240 595 aa16.75■□□□□ 0.27
RAPGEF1-202ENST00000372190 SPATA24Q86W54 205 aa16.75■□□□□ 0.27
RAPGEF1-202ENST00000372190 NEUROD6Q96NK8 337 aa16.75■□□□□ 0.27
RAPGEF1-202ENST00000372190 COG6Q9Y2V7 657 aa16.75■□□□□ 0.27
RAPGEF1-202ENST00000372190 DZIP1LQ8IYY4 767 aaKnown RBP16.75■□□□□ 0.27
RAPGEF1-202ENST00000372190 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
RAPGEF1-202ENST00000372190 UBAP1LF5GYI3 381 aa16.75■□□□□ 0.27
RAPGEF1-202ENST00000372190 RNF20Q5VTR2 975 aa16.75■□□□□ 0.27
RAPGEF1-202ENST00000372190 WWC1Q8IX03 1113 aa16.75■□□□□ 0.27
RAPGEF1-202ENST00000372190 CCAR1Q8IX12 1150 aaKnown RBP16.75■□□□□ 0.27
RAPGEF1-202ENST00000372190 BCL11BQ9C0K0 894 aaPredicted RBP16.75■□□□□ 0.27
RAPGEF1-202ENST00000372190 ZMYND15Q9H091 742 aa16.75■□□□□ 0.27
RAPGEF1-202ENST00000372190 TCEAL9Q9UHQ7 104 aa16.75■□□□□ 0.27
RAPGEF1-202ENST00000372190 FAM135AQ9P2D6 1515 aa16.75■□□□□ 0.27
RAPGEF1-202ENST00000372190 HSP90AB4PQ58FF6 505 aa16.75■□□□□ 0.27
RAPGEF1-202ENST00000372190 TOM1O60784 492 aa16.74■□□□□ 0.27
RAPGEF1-202ENST00000372190 GTF2A1P52655 376 aaPredicted RBP16.74■□□□□ 0.27
RAPGEF1-202ENST00000372190 BRPF3Q9ULD4 1205 aa16.74■□□□□ 0.27
RAPGEF1-202ENST00000372190 CCDC27Q2M243 656 aa16.74■□□□□ 0.27
RAPGEF1-202ENST00000372190 PHF8Q9UPP1 1060 aa16.74■□□□□ 0.27
RAPGEF1-202ENST00000372190 RRS1Q15050 365 aaKnown RBP16.74■□□□□ 0.27
RAPGEF1-202ENST00000372190 ANKRD18AQ8IVF6 992 aa16.74■□□□□ 0.27
RAPGEF1-202ENST00000372190 PNISRQ8TF01 805 aaKnown RBP16.74■□□□□ 0.27
RAPGEF1-202ENST00000372190 CGNQ9P2M7 1197 aaKnown RBP16.74■□□□□ 0.27
RAPGEF1-202ENST00000372190 WDR7Q9Y4E6 1490 aa16.74■□□□□ 0.27
RAPGEF1-202ENST00000372190 DHX37Q8IY37 1157 aaKnown RBP16.73■□□□□ 0.27
RAPGEF1-202ENST00000372190 RUFY2Q8WXA3 655 aa16.73■□□□□ 0.27
RAPGEF1-202ENST00000372190 FAM107BQ9H098 131 aa16.73■□□□□ 0.27
RAPGEF1-202ENST00000372190 EZRP15311 586 aaKnown RBP16.73■□□□□ 0.27
RAPGEF1-202ENST00000372190 RAPGEF6Q8TEU7 1601 aa16.73■□□□□ 0.27
RAPGEF1-202ENST00000372190 DHX16O60231 1041 aaKnown RBP16.73■□□□□ 0.27
RAPGEF1-202ENST00000372190 IDI1Q13907 227 aa16.73■□□□□ 0.27
RAPGEF1-202ENST00000372190 UBTFL1P0CB47 393 aaPredicted RBP16.73■□□□□ 0.27
RAPGEF1-202ENST00000372190 PAIP2Q9BPZ3 127 aaKnown RBP16.73■□□□□ 0.27
RAPGEF1-202ENST00000372190 ERLIN2O94905 339 aa16.72■□□□□ 0.27
RAPGEF1-202ENST00000372190 HSP90AB2PQ58FF8 381 aa16.72■□□□□ 0.27
RAPGEF1-202ENST00000372190 ABCC5O15440 1437 aa16.72■□□□□ 0.27
RAPGEF1-202ENST00000372190 RABEP1Q15276 862 aa16.72■□□□□ 0.27
RAPGEF1-202ENST00000372190 DHX29Q7Z478 1369 aaKnown RBP16.72■□□□□ 0.27
RAPGEF1-202ENST00000372190 SETSIPP0DME0 302 aa16.72■□□□□ 0.27
RAPGEF1-202ENST00000372190 PPP2R1AP30153 589 aa16.72■□□□□ 0.27
RAPGEF1-202ENST00000372190 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.72■□□□□ 0.275e-7■■■■■ 91.9
RAPGEF1-202ENST00000372190 GOLGA6L10A0A0M3HER8 536 aa16.71■□□□□ 0.27
RAPGEF1-202ENST00000372190 FOXO3O43524 673 aa16.71■□□□□ 0.27
RAPGEF1-202ENST00000372190 DNAJC2Q99543 621 aaKnown RBP16.71■□□□□ 0.27
RAPGEF1-202ENST00000372190 MSH6P52701 1360 aa16.71■□□□□ 0.27
RAPGEF1-202ENST00000372190 TMCO5BA8MYB1 307 aa16.7■□□□□ 0.26
RAPGEF1-202ENST00000372190 FYB1O15117 783 aa16.7■□□□□ 0.26
RAPGEF1-202ENST00000372190 ENOX2Q16206 610 aaKnown RBP16.7■□□□□ 0.26
RAPGEF1-202ENST00000372190 SAMD1Q6SPF0 538 aaPredicted RBP16.7■□□□□ 0.26
RAPGEF1-202ENST00000372190 CT47A1Q5JQC4 288 aaPredicted RBP16.7■□□□□ 0.26
RAPGEF1-202ENST00000372190 CCDC112Q8NEF3 446 aa16.69■□□□□ 0.26
RAPGEF1-202ENST00000372190 CADPS2Q86UW7 1296 aa16.69■□□□□ 0.26
RAPGEF1-202ENST00000372190 NFKBIBQ15653 356 aa16.69■□□□□ 0.26
RAPGEF1-202ENST00000372190 BICD2Q8TD16 824 aa16.69■□□□□ 0.26
RAPGEF1-202ENST00000372190 SHTN1A0MZ66 631 aa16.69■□□□□ 0.26
RAPGEF1-202ENST00000372190 ODF2Q5BJF6 829 aa16.69■□□□□ 0.26
RAPGEF1-202ENST00000372190 TCP11L2Q8N4U5 519 aa16.68■□□□□ 0.26
RAPGEF1-202ENST00000372190 NAT10Q9H0A0 1025 aaKnown RBP16.68■□□□□ 0.26
RAPGEF1-202ENST00000372190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.68■□□□□ 0.26
RAPGEF1-202ENST00000372190 TRDNQ13061 729 aa16.68■□□□□ 0.26
RAPGEF1-202ENST00000372190 FOXD4L6Q3SYB3 417 aaPredicted RBP16.68■□□□□ 0.26
RAPGEF1-202ENST00000372190 FOXD4L3Q6VB84 417 aaPredicted RBP16.68■□□□□ 0.26
RAPGEF1-202ENST00000372190 KRT28Q7Z3Y7 464 aa16.68■□□□□ 0.26
RAPGEF1-202ENST00000372190 NUCB2P80303 420 aa16.68■□□□□ 0.26
RAPGEF1-202ENST00000372190 PLCH2O75038 1416 aa16.68■□□□□ 0.26
RAPGEF1-202ENST00000372190 SEPT7Q16181 437 aaKnown RBP16.67■□□□□ 0.26
RAPGEF1-202ENST00000372190 ERC2O15083 957 aa16.67■□□□□ 0.26
RAPGEF1-202ENST00000372190 ERICH2A1L162 156 aa16.67■□□□□ 0.26
RAPGEF1-202ENST00000372190 DHX8Q14562 1220 aaKnown RBP16.67■□□□□ 0.26
RAPGEF1-202ENST00000372190 PDCL3Q9H2J4 239 aa16.67■□□□□ 0.26
RAPGEF1-202ENST00000372190 CNNM1Q9NRU3 951 aa16.67■□□□□ 0.26
RAPGEF1-202ENST00000372190 ADAMTS8Q9UP79 889 aa16.67■□□□□ 0.26
RAPGEF1-202ENST00000372190 EIF4G3O43432 1585 aaKnown RBP16.67■□□□□ 0.26
RAPGEF1-202ENST00000372190 BTBD11A6QL63 1104 aa16.66■□□□□ 0.26
RAPGEF1-202ENST00000372190 MYL6BP14649 208 aa16.66■□□□□ 0.26
RAPGEF1-202ENST00000372190 LETM1O95202 739 aaPredicted RBP16.66■□□□□ 0.26
RAPGEF1-202ENST00000372190 HDGFL1Q5TGJ6 251 aa16.66■□□□□ 0.26
RAPGEF1-202ENST00000372190 PRDM10Q9NQV6 1147 aa16.66■□□□□ 0.26
RAPGEF1-202ENST00000372190 WASHC4Q2M389 1173 aa16.66■□□□□ 0.26
RAPGEF1-202ENST00000372190 NBPF8Q3BBV2 869 aa16.66■□□□□ 0.26
RAPGEF1-202ENST00000372190 TMOD3Q9NYL9 352 aa16.66■□□□□ 0.26
RAPGEF1-202ENST00000372190 REC8O95072 547 aa16.65■□□□□ 0.26
RAPGEF1-202ENST00000372190 BICDL1Q6ZP65 573 aa16.65■□□□□ 0.26
RAPGEF1-202ENST00000372190 SEPT11Q9NVA2 429 aaKnown RBP16.65■□□□□ 0.26
RAPGEF1-202ENST00000372190 THOC2Q8NI27 1593 aaKnown RBP16.65■□□□□ 0.26
RAPGEF1-202ENST00000372190 ZNF518AQ6AHZ1 1483 aa16.65■□□□□ 0.26
RAPGEF1-202ENST00000372190 ADAMTS12P58397 1594 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms