RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 USP35Q9P2H5 1018 aa18.74■□□□□ 0.59
LDB3-204ENST00000372066 POLR3AO14802 1390 aaPredicted RBP18.74■□□□□ 0.59
LDB3-204ENST00000372066 RNF123Q5XPI4 1314 aa18.73■□□□□ 0.59
LDB3-204ENST00000372066 NRAPQ86VF7 1730 aa18.73■□□□□ 0.59
LDB3-204ENST00000372066 SRPK2P78362 688 aaKnown RBP18.73■□□□□ 0.59
LDB3-204ENST00000372066 FAM196AQ6ZSG2 479 aa18.71■□□□□ 0.59
LDB3-204ENST00000372066 CABP2Q9NPB3 220 aa18.71■□□□□ 0.59
LDB3-204ENST00000372066 PPP4R2Q9NY27 417 aa18.71■□□□□ 0.59
LDB3-204ENST00000372066 TRIM37O94972 964 aa18.7■□□□□ 0.58
LDB3-204ENST00000372066 PPP2R1AP30153 589 aa18.7■□□□□ 0.58
LDB3-204ENST00000372066 EZH2Q15910 746 aaKnown RBP18.68■□□□□ 0.58
LDB3-204ENST00000372066 LARP1Q6PKG0 1096 aaKnown RBP18.68■□□□□ 0.58
LDB3-204ENST00000372066 GCP02774 474 aa18.68■□□□□ 0.58
LDB3-204ENST00000372066 R3HDM1Q15032 1099 aaKnown RBP18.68■□□□□ 0.58
LDB3-204ENST00000372066 BARGINQ6ZT62 677 aa18.68■□□□□ 0.58
LDB3-204ENST00000372066 NINLQ9Y2I6 1382 aa18.67■□□□□ 0.58
LDB3-204ENST00000372066 TCP11L2Q8N4U5 519 aa18.67■□□□□ 0.58
LDB3-204ENST00000372066 APBA3O96018 575 aa18.66■□□□□ 0.58
LDB3-204ENST00000372066 CABP1Q9NZU7 370 aa18.66■□□□□ 0.58
LDB3-204ENST00000372066 PPIP5K1Q6PFW1 1433 aa18.66■□□□□ 0.58
LDB3-204ENST00000372066 USP19O94966 1318 aa18.66■□□□□ 0.58
LDB3-204ENST00000372066 ITSN1Q15811 1721 aa18.66■□□□□ 0.58
LDB3-204ENST00000372066 CAMKK2Q96RR4 588 aa18.65■□□□□ 0.58
LDB3-204ENST00000372066 SSH2Q76I76 1423 aa18.65■□□□□ 0.58
LDB3-204ENST00000372066 CRYBG1Q9Y4K1 1723 aa18.65■□□□□ 0.58
LDB3-204ENST00000372066 EVC2Q86UK5 1308 aa18.65■□□□□ 0.58
LDB3-204ENST00000372066 ZBTB7CA1YPR0 619 aa18.64■□□□□ 0.58
LDB3-204ENST00000372066 THSD7AQ9UPZ6 1657 aa18.64■□□□□ 0.57
LDB3-204ENST00000372066 CPDO75976 1380 aa18.64■□□□□ 0.57
LDB3-204ENST00000372066 WDR43Q15061 677 aaKnown RBP eCLIP18.64■□□□□ 0.57
LDB3-204ENST00000372066 TSHZ2Q9NRE2 1034 aa18.64■□□□□ 0.57
LDB3-204ENST00000372066 DISP2A7MBM2 1401 aa18.63■□□□□ 0.57
LDB3-204ENST00000372066 NLRP6P59044 892 aa18.63■□□□□ 0.57
LDB3-204ENST00000372066 NSD2O96028 1365 aa18.62■□□□□ 0.57
LDB3-204ENST00000372066 THRAP3Q9Y2W1 955 aaKnown RBP18.62■□□□□ 0.57
LDB3-204ENST00000372066 CAMTA1Q9Y6Y1 1673 aa18.62■□□□□ 0.57
LDB3-204ENST00000372066 PHRF1Q9P1Y6 1649 aaKnown RBP18.61■□□□□ 0.57
LDB3-204ENST00000372066 NSD3Q9BZ95 1437 aa18.61■□□□□ 0.57
LDB3-204ENST00000372066 IRX6P78412 446 aaPredicted RBP18.6■□□□□ 0.57
LDB3-204ENST00000372066 ANKRD26Q9UPS8 1709 aa18.6■□□□□ 0.57
LDB3-204ENST00000372066 ANKRD36BQ8N2N9 1353 aa18.59■□□□□ 0.57
LDB3-204ENST00000372066 TOPAZ1Q8N9V7 1692 aa18.59■□□□□ 0.57
LDB3-204ENST00000372066 RGPD1P0DJD0 1748 aa18.59■□□□□ 0.57
LDB3-204ENST00000372066 NGEFQ8N5V2 710 aa18.59■□□□□ 0.57
LDB3-204ENST00000372066 CARD14Q9BXL6 1004 aa18.59■□□□□ 0.57
LDB3-204ENST00000372066 NRKQ7Z2Y5 1582 aa18.57■□□□□ 0.56
LDB3-204ENST00000372066 USP6P35125 1406 aa18.56■□□□□ 0.56
LDB3-204ENST00000372066 NBPF14Q5TI25 921 aa18.56■□□□□ 0.56
LDB3-204ENST00000372066 ADAMTS8Q9UP79 889 aa18.56■□□□□ 0.56
LDB3-204ENST00000372066 LRP5O75197 1615 aa18.56■□□□□ 0.56
LDB3-204ENST00000372066 TOM1L2Q6ZVM7 507 aa18.55■□□□□ 0.56
LDB3-204ENST00000372066 AATKQ6ZMQ8 1374 aa18.55■□□□□ 0.56
LDB3-204ENST00000372066 CGNL1Q0VF96 1302 aa18.55■□□□□ 0.56
LDB3-204ENST00000372066 ZNF692Q9BU19 519 aaPredicted RBP18.55■□□□□ 0.56
LDB3-204ENST00000372066 COL5A2P05997 1499 aaPredicted RBP18.54■□□□□ 0.56
LDB3-204ENST00000372066 RCAN3Q9UKA8 241 aa18.54■□□□□ 0.56
LDB3-204ENST00000372066 CRB1P82279 1406 aa18.54■□□□□ 0.56
LDB3-204ENST00000372066 SOX12O15370 315 aa18.52■□□□□ 0.56
LDB3-204ENST00000372066 AXIN2Q9Y2T1 843 aa18.52■□□□□ 0.56
LDB3-204ENST00000372066 LMO7Q8WWI1 1683 aa18.52■□□□□ 0.55
LDB3-204ENST00000372066 TTC21BQ7Z4L5 1316 aa18.52■□□□□ 0.55
LDB3-204ENST00000372066 RRP1P56182 461 aaKnown RBP18.51■□□□□ 0.55
LDB3-204ENST00000372066 DDB1Q16531 1140 aa18.51■□□□□ 0.55
LDB3-204ENST00000372066 TNS1Q9HBL0 1735 aaKnown RBP18.51■□□□□ 0.55
LDB3-204ENST00000372066 KCNH5Q8NCM2 988 aa18.51■□□□□ 0.55
LDB3-204ENST00000372066 SLC12A5Q9H2X9 1139 aa18.51■□□□□ 0.55
LDB3-204ENST00000372066 ZNF521Q96K83 1311 aa18.5■□□□□ 0.55
LDB3-204ENST00000372066 KIF20BQ96Q89 1820 aa18.5■□□□□ 0.55
LDB3-204ENST00000372066 MORC1Q86VD1 984 aa18.5■□□□□ 0.55
LDB3-204ENST00000372066 CSB-PGBD3P0DP91 1061 aa18.49■□□□□ 0.55
LDB3-204ENST00000372066 ARHGEF25Q86VW2 580 aa18.49■□□□□ 0.55
LDB3-204ENST00000372066 WDR17Q8IZU2 1322 aa18.48■□□□□ 0.55
LDB3-204ENST00000372066 SLIT3O75094 1523 aa18.47■□□□□ 0.55
LDB3-204ENST00000372066 TTC21AQ8NDW8 1320 aa18.47■□□□□ 0.55
LDB3-204ENST00000372066 CDCA7Q9BWT1 371 aaPredicted RBP18.47■□□□□ 0.55
LDB3-204ENST00000372066 OVOS2A0A0G2JMS6 1433 aa18.46■□□□□ 0.55
LDB3-204ENST00000372066 OVOS2A0A0J9YW53 1432 aa18.46■□□□□ 0.55
LDB3-204ENST00000372066 OVOS2Q6IE36 1432 aa18.46■□□□□ 0.55
LDB3-204ENST00000372066 PLSCR1O15162 318 aa18.45■□□□□ 0.54
LDB3-204ENST00000372066 MARCH10Q8NA82 808 aaPredicted RBP18.45■□□□□ 0.54
LDB3-204ENST00000372066 CARD10Q9BWT7 1032 aa18.45■□□□□ 0.54
LDB3-204ENST00000372066 BCL11BQ9C0K0 894 aaPredicted RBP18.45■□□□□ 0.54
LDB3-204ENST00000372066 TERF2IPQ9NYB0 399 aa18.45■□□□□ 0.54
LDB3-204ENST00000372066 SALL2Q9Y467 1007 aaPredicted RBP18.45■□□□□ 0.54
LDB3-204ENST00000372066 GOLGA2Q08379 1002 aa18.44■□□□□ 0.54
LDB3-204ENST00000372066 PTF1AQ7RTS3 328 aa18.44■□□□□ 0.54
LDB3-204ENST00000372066 CFAP53Q96M91 514 aa18.44■□□□□ 0.54
LDB3-204ENST00000372066 SPON1Q9HCB6 807 aa18.44■□□□□ 0.54
LDB3-204ENST00000372066 A0A1W2PP64 1363 aa18.44■□□□□ 0.54
LDB3-204ENST00000372066 CPSF1Q10570 1443 aaKnown RBP18.43■□□□□ 0.54
LDB3-204ENST00000372066 B4GALNT3Q6L9W6 998 aa18.43■□□□□ 0.54
LDB3-204ENST00000372066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.43■□□□□ 0.54
LDB3-204ENST00000372066 CDCA7LQ96GN5 454 aa18.43■□□□□ 0.54
LDB3-204ENST00000372066 SENP3-EIF4A1A0A087X0R7 540 aa18.42■□□□□ 0.54
LDB3-204ENST00000372066 EXOC5O00471 708 aa18.42■□□□□ 0.54
LDB3-204ENST00000372066 PPP1R1BQ9UD71 204 aaPredicted RBP18.42■□□□□ 0.54
LDB3-204ENST00000372066 CD163L1Q9NR16 1453 aa18.42■□□□□ 0.54
LDB3-204ENST00000372066 KCNQ2O43526 872 aa18.42■□□□□ 0.54
LDB3-204ENST00000372066 NCBP3Q53F19 620 aaKnown RBP18.42■□□□□ 0.54
LDB3-204ENST00000372066 CCDC136Q96JN2 1154 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms