RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 RGPD5Q99666 1765 aa14.55□□□□□ -0.08
LCN1-202ENST00000371781 HSP90AB2PQ58FF8 381 aa14.55□□□□□ -0.08
LCN1-202ENST00000371781 UPF1Q92900 1129 aaKnown RBP eCLIP14.55□□□□□ -0.08
LCN1-202ENST00000371781 CFAP53Q96M91 514 aa14.55□□□□□ -0.08
LCN1-202ENST00000371781 RTL1A6NKG5 1358 aa14.55□□□□□ -0.08
LCN1-202ENST00000371781 PPM1GO15355 546 aaPredicted RBP14.54□□□□□ -0.08
LCN1-202ENST00000371781 EIF4A2Q14240 407 aaKnown RBP14.54□□□□□ -0.08
LCN1-202ENST00000371781 WDR43Q15061 677 aaKnown RBP eCLIP14.54□□□□□ -0.08
LCN1-202ENST00000371781 CCDC146Q8IYE0 955 aa14.54□□□□□ -0.08
LCN1-202ENST00000371781 ZBED9Q6R2W3 1325 aa14.54□□□□□ -0.08
LCN1-202ENST00000371781 ARHGEF10O15013 1369 aa14.54□□□□□ -0.08
LCN1-202ENST00000371781 LMO7Q8WWI1 1683 aa14.54□□□□□ -0.08
LCN1-202ENST00000371781 KIF24Q5T7B8 1368 aa14.53□□□□□ -0.08
LCN1-202ENST00000371781 NUTM2BA6NNL0 878 aaPredicted RBP14.53□□□□□ -0.08
LCN1-202ENST00000371781 NUTM2EB1AL46 878 aaPredicted RBP14.53□□□□□ -0.08
LCN1-202ENST00000371781 DIAPH1O60610 1272 aaKnown RBP14.53□□□□□ -0.08
LCN1-202ENST00000371781 NUTM2AQ8IVF1 878 aaPredicted RBP14.53□□□□□ -0.08
LCN1-202ENST00000371781 PLEKHG5O94827 1062 aa14.52□□□□□ -0.09
LCN1-202ENST00000371781 GCP02774 474 aa14.52□□□□□ -0.09
LCN1-202ENST00000371781 HOXC9P31274 260 aa14.52□□□□□ -0.09
LCN1-202ENST00000371781 LMOD2Q6P5Q4 547 aa14.52□□□□□ -0.09
LCN1-202ENST00000371781 ARHGEF25Q86VW2 580 aa14.52□□□□□ -0.09
LCN1-202ENST00000371781 CABLES1Q8TDN4 633 aa14.52□□□□□ -0.09
LCN1-202ENST00000371781 ABCC6O95255 1503 aa14.51□□□□□ -0.09
LCN1-202ENST00000371781 PLEKHF1Q96S99 279 aa14.51□□□□□ -0.09
LCN1-202ENST00000371781 FAM208AQ9UK61 1670 aaKnown RBP14.5□□□□□ -0.09
LCN1-202ENST00000371781 RXRBP28702 533 aa14.5□□□□□ -0.09
LCN1-202ENST00000371781 RSPH6AQ9H0K4 717 aa14.5□□□□□ -0.09
LCN1-202ENST00000371781 NCAPD2Q15021 1401 aa14.49□□□□□ -0.09
LCN1-202ENST00000371781 CPDO75976 1380 aa14.49□□□□□ -0.09
LCN1-202ENST00000371781 AFF2P51816 1311 aa14.49□□□□□ -0.09
LCN1-202ENST00000371781 ZNF521Q96K83 1311 aa14.49□□□□□ -0.09
LCN1-202ENST00000371781 U2SURPO15042 1029 aaKnown RBP14.49□□□□□ -0.09
LCN1-202ENST00000371781 U2AF1L5P0DN76 240 aaPredicted RBP14.49□□□□□ -0.09
LCN1-202ENST00000371781 U2AF1Q01081 240 aaKnown RBP eCLIP14.49□□□□□ -0.09
LCN1-202ENST00000371781 AEBP1Q8IUX7 1158 aa14.49□□□□□ -0.09
LCN1-202ENST00000371781 KCNH5Q8NCM2 988 aa14.49□□□□□ -0.09
LCN1-202ENST00000371781 IP6K1Q92551 441 aa14.48□□□□□ -0.09
LCN1-202ENST00000371781 RGS12O14924 1447 aa14.48□□□□□ -0.09
LCN1-202ENST00000371781 KDRP35968 1356 aa14.47□□□□□ -0.09
LCN1-202ENST00000371781 KIAA0232Q92628 1395 aa14.47□□□□□ -0.09
LCN1-202ENST00000371781 IGSF1Q8N6C5 1336 aa14.47□□□□□ -0.09
LCN1-202ENST00000371781 APAF1O14727 1248 aa14.47□□□□□ -0.09
LCN1-202ENST00000371781 AMPHP49418 695 aa14.47□□□□□ -0.09
LCN1-202ENST00000371781 AXIN2Q9Y2T1 843 aa14.47□□□□□ -0.09
LCN1-202ENST00000371781 HMOX1P09601 288 aa14.46□□□□□ -0.09
LCN1-202ENST00000371781 DLG5Q8TDM6 1919 aa14.46□□□□□ -0.09
LCN1-202ENST00000371781 ZC3H6P61129 1189 aaKnown RBP14.45□□□□□ -0.1
LCN1-202ENST00000371781 RUNDC1Q96C34 613 aa14.45□□□□□ -0.1
LCN1-202ENST00000371781 EYA1Q99502 592 aa14.45□□□□□ -0.1
LCN1-202ENST00000371781 NUDCQ9Y266 331 aa14.45□□□□□ -0.1
LCN1-202ENST00000371781 SALL2Q9Y467 1007 aaPredicted RBP14.45□□□□□ -0.1
LCN1-202ENST00000371781 ZBTB7CA1YPR0 619 aa14.44□□□□□ -0.1
LCN1-202ENST00000371781 PRKAR2BP31323 418 aa14.44□□□□□ -0.1
LCN1-202ENST00000371781 C8orf37Q96NL8 207 aa14.44□□□□□ -0.1
LCN1-202ENST00000371781 RRP7AQ9Y3A4 280 aaKnown RBP14.44□□□□□ -0.1
LCN1-202ENST00000371781 CENPBP07199 599 aaPredicted RBP14.43□□□□□ -0.1
LCN1-202ENST00000371781 TCP11L2Q8N4U5 519 aa14.43□□□□□ -0.1
LCN1-202ENST00000371781 LRRC59Q96AG4 307 aaKnown RBP14.43□□□□□ -0.1
LCN1-202ENST00000371781 PHACTR3Q96KR7 559 aa14.43□□□□□ -0.1
LCN1-202ENST00000371781 NRAPQ86VF7 1730 aa14.42□□□□□ -0.1
LCN1-202ENST00000371781 CHRNA2Q15822 529 aa14.42□□□□□ -0.1
LCN1-202ENST00000371781 LTV1Q96GA3 475 aaPredicted RBP14.42□□□□□ -0.1
LCN1-202ENST00000371781 COL5A2P05997 1499 aaPredicted RBP14.42□□□□□ -0.1
LCN1-202ENST00000371781 PLCH1Q4KWH8 1693 aa14.42□□□□□ -0.1
LCN1-202ENST00000371781 ERBB3P21860 1342 aa14.41□□□□□ -0.1
LCN1-202ENST00000371781 FCHSD2O94868 740 aa14.41□□□□□ -0.1
LCN1-202ENST00000371781 SULT6B1Q6IMI4 303 aa14.41□□□□□ -0.1
LCN1-202ENST00000371781 USHBP1Q8N6Y0 703 aa14.41□□□□□ -0.1
LCN1-202ENST00000371781 CDCA7LQ96GN5 454 aa14.41□□□□□ -0.1
LCN1-202ENST00000371781 SPINK5Q9NQ38 1064 aaPredicted RBP14.41□□□□□ -0.1
LCN1-202ENST00000371781 COL14A1Q05707 1796 aaKnown RBP14.41□□□□□ -0.1
LCN1-202ENST00000371781 LRRC37A3O60309 1634 aa14.41□□□□□ -0.1
LCN1-202ENST00000371781 NBPF6Q5VWK0 638 aa14.4□□□□□ -0.1
LCN1-202ENST00000371781 ANKRD24Q8TF21 1146 aa14.4□□□□□ -0.1
LCN1-202ENST00000371781 NBPF4Q96M43 638 aa14.4□□□□□ -0.1
LCN1-202ENST00000371781 QTRT2Q9H974 415 aaKnown RBP14.4□□□□□ -0.1
LCN1-202ENST00000371781 ADAMTS2O95450 1211 aa14.39□□□□□ -0.11
LCN1-202ENST00000371781 TMPOP42166 694 aaKnown RBP14.39□□□□□ -0.11
LCN1-202ENST00000371781 RBM6P78332 1123 aaKnown RBP14.39□□□□□ -0.11
LCN1-202ENST00000371781 TRIM35Q9UPQ4 493 aa14.39□□□□□ -0.11
LCN1-202ENST00000371781 MEGF6O75095 1541 aa14.38□□□□□ -0.11
LCN1-202ENST00000371781 WWC1Q8IX03 1113 aa14.37□□□□□ -0.11
LCN1-202ENST00000371781 PKD1L3Q7Z443 1732 aa14.36□□□□□ -0.11
LCN1-202ENST00000371781 SHANK3Q9BYB0 1731 aa14.36□□□□□ -0.11
LCN1-202ENST00000371781 NFE2L2Q16236 605 aa14.36□□□□□ -0.11
LCN1-202ENST00000371781 CCDC27Q2M243 656 aa14.36□□□□□ -0.11
LCN1-202ENST00000371781 NGLY1Q96IV0 654 aa14.36□□□□□ -0.11
LCN1-202ENST00000371781 PRDM11Q9NQV5 511 aa14.36□□□□□ -0.11
LCN1-202ENST00000371781 MAPK8IP3Q9UPT6 1336 aa14.36□□□□□ -0.11
LCN1-202ENST00000371781 WNK3Q9BYP7 1800 aa14.36□□□□□ -0.11
LCN1-202ENST00000371781 FAM83GA6ND36 823 aa14.35□□□□□ -0.11
LCN1-202ENST00000371781 NEUROD2Q15784 382 aa14.35□□□□□ -0.11
LCN1-202ENST00000371781 NCBP3Q53F19 620 aaKnown RBP14.35□□□□□ -0.11
LCN1-202ENST00000371781 TRMT2AQ8IZ69 625 aaKnown RBP14.34□□□□□ -0.11
LCN1-202ENST00000371781 ADAMTS7Q9UKP4 1686 aa14.33□□□□□ -0.11
LCN1-202ENST00000371781 MTHFSDQ2M296 383 aaKnown RBP14.33□□□□□ -0.12
LCN1-202ENST00000371781 DUSP27Q5VZP5 1158 aa14.33□□□□□ -0.12
LCN1-202ENST00000371781 USP21Q9UK80 565 aa14.33□□□□□ -0.12
LCN1-202ENST00000371781 NWD2Q9ULI1 1742 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms