RNA–Protein interactions for RNA: ENST00000371569.6

UBE2A-203, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 1 (best)

Gene UBE2A, Length 2,643 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-203ENST00000371569 PTGDRQ13258 359 aa3.05□□□□□ -1.92
UBE2A-203ENST00000371569 SPDYE5A6NIY4 337 aa3.05□□□□□ -1.92
UBE2A-203ENST00000371569 PPP1R15AO75807 674 aaPredicted RBP3.05□□□□□ -1.92
UBE2A-203ENST00000371569 NANOS1Q8WY41 292 aaKnown RBP3.05□□□□□ -1.92
UBE2A-203ENST00000371569 MS4A1P11836 297 aa3.04□□□□□ -1.92
UBE2A-203ENST00000371569 GCGRP47871 477 aa3.04□□□□□ -1.92
UBE2A-203ENST00000371569 WDR62O43379 1518 aa3.04□□□□□ -1.92
UBE2A-203ENST00000371569 USP46P62068 366 aa3.04□□□□□ -1.92
UBE2A-203ENST00000371569 GPCPD1Q9NPB8 672 aa3.04□□□□□ -1.92
UBE2A-203ENST00000371569 SIAH2O43255 324 aa3.03□□□□□ -1.92
UBE2A-203ENST00000371569 DIXDC1Q155Q3 683 aa3.03□□□□□ -1.92
UBE2A-203ENST00000371569 PXYLP1Q8TE99 480 aa3.03□□□□□ -1.92
UBE2A-203ENST00000371569 SNAPC4Q5SXM2 1469 aa3.03□□□□□ -1.92
UBE2A-203ENST00000371569 GPAT2Q6NUI2 795 aa3.03□□□□□ -1.93
UBE2A-203ENST00000371569 WWC1Q8IX03 1113 aa3.03□□□□□ -1.93
UBE2A-203ENST00000371569 ENAMQ9NRM1 1142 aa3.03□□□□□ -1.93
UBE2A-203ENST00000371569 ZNF777Q9ULD5 760 aaPredicted RBP3.03□□□□□ -1.93
UBE2A-203ENST00000371569 PPFIA3O75145 1194 aa3.02□□□□□ -1.93
UBE2A-203ENST00000371569 ARHGEF15O94989 841 aa3.02□□□□□ -1.93
UBE2A-203ENST00000371569 ALDH1A1P00352 501 aa3.02□□□□□ -1.93
UBE2A-203ENST00000371569 SLURP2P0DP57 97 aa3.02□□□□□ -1.93
UBE2A-203ENST00000371569 FECHP22830 423 aa3.02□□□□□ -1.93
UBE2A-203ENST00000371569 TMEM259Q4ZIN3 620 aa3.02□□□□□ -1.93
UBE2A-203ENST00000371569 MRPL14Q6P1L8 145 aaKnown RBP3.02□□□□□ -1.93
UBE2A-203ENST00000371569 PCF11O94913 1555 aaKnown RBP3.02□□□□□ -1.93
UBE2A-203ENST00000371569 SSTR3P32745 418 aaPredicted RBP3.02□□□□□ -1.93
UBE2A-203ENST00000371569 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
UBE2A-203ENST00000371569 TUSC1Q2TAM9 212 aa3.01□□□□□ -1.93
UBE2A-203ENST00000371569 RGS22Q8NE09 1264 aa3.01□□□□□ -1.93
UBE2A-203ENST00000371569 USB1Q9BQ65 265 aaKnown RBP3.01□□□□□ -1.93
UBE2A-203ENST00000371569 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.01□□□□□ -1.93
UBE2A-203ENST00000371569 SLC27A5Q9Y2P5 690 aa3.01□□□□□ -1.93
UBE2A-203ENST00000371569 COG6Q9Y2V7 657 aa3.01□□□□□ -1.93
UBE2A-203ENST00000371569 ACIN1Q9UKV3 1341 aaKnown RBP3.01□□□□□ -1.93
UBE2A-203ENST00000371569 VARSP26640 1264 aaKnown RBP3.01□□□□□ -1.93
UBE2A-203ENST00000371569 TMCO4Q5TGY1 634 aa3.01□□□□□ -1.93
UBE2A-203ENST00000371569 ZFP42Q96MM3 310 aa3.01□□□□□ -1.93
UBE2A-203ENST00000371569 PRM3Q9NNZ6 103 aa3.01□□□□□ -1.93
UBE2A-203ENST00000371569 LRP5O75197 1615 aa3□□□□□ -1.93
UBE2A-203ENST00000371569 K7ELQ4 463 aaPredicted RBP3□□□□□ -1.93
UBE2A-203ENST00000371569 JUNDP17535 347 aa3□□□□□ -1.93
UBE2A-203ENST00000371569 ZNF385CQ66K41 422 aaPredicted RBP3□□□□□ -1.93
UBE2A-203ENST00000371569 PPP2R2DQ66LE6 453 aa3□□□□□ -1.93
UBE2A-203ENST00000371569 RDH13Q8NBN7 331 aa3□□□□□ -1.93
UBE2A-203ENST00000371569 UPP2O95045 317 aa3□□□□□ -1.93
UBE2A-203ENST00000371569 IRS1P35568 1242 aa3□□□□□ -1.93
UBE2A-203ENST00000371569 EHBP1Q8NDI1 1231 aa3□□□□□ -1.93
UBE2A-203ENST00000371569 BEGAINQ9BUH8 593 aa3□□□□□ -1.93
UBE2A-203ENST00000371569 LRRC4BQ9NT99 713 aa3□□□□□ -1.93
UBE2A-203ENST00000371569 FAM217BQ9NTX9 383 aaPredicted RBP3□□□□□ -1.93
UBE2A-203ENST00000371569 ZNF330Q9Y3S2 320 aaPredicted RBP3□□□□□ -1.93
UBE2A-203ENST00000371569 SKOR1P84550 965 aa2.99□□□□□ -1.93
UBE2A-203ENST00000371569 PUS10Q3MIT2 529 aaKnown RBP2.99□□□□□ -1.93
UBE2A-203ENST00000371569 AEBP1Q8IUX7 1158 aa2.99□□□□□ -1.93
UBE2A-203ENST00000371569 RETREG2Q8NC44 543 aa2.99□□□□□ -1.93
UBE2A-203ENST00000371569 POM121Q96HA1 1249 aa2.99□□□□□ -1.93
UBE2A-203ENST00000371569 SPTLC1O15269 473 aa2.99□□□□□ -1.93
UBE2A-203ENST00000371569 ADH1CP00326 375 aa2.99□□□□□ -1.93
UBE2A-203ENST00000371569 CLK2P49760 499 aaKnown RBP2.99□□□□□ -1.93
UBE2A-203ENST00000371569 MDM2Q00987 491 aaPredicted RBP2.99□□□□□ -1.93
UBE2A-203ENST00000371569 MAP3K10Q02779 954 aa2.99□□□□□ -1.93
UBE2A-203ENST00000371569 KRTAP1-1Q07627 177 aa2.99□□□□□ -1.93
UBE2A-203ENST00000371569 KCNA1Q09470 495 aa2.99□□□□□ -1.93
UBE2A-203ENST00000371569 MYSM1Q5VVJ2 828 aa2.99□□□□□ -1.93
UBE2A-203ENST00000371569 PROCA1Q8NCQ7 364 aaPredicted RBP2.99□□□□□ -1.93
UBE2A-203ENST00000371569 GMCL1Q96IK5 515 aa2.99□□□□□ -1.93
UBE2A-203ENST00000371569 GJA5P36382 358 aa2.98□□□□□ -1.93
UBE2A-203ENST00000371569 RFC5P40937 340 aa2.98□□□□□ -1.93
UBE2A-203ENST00000371569 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.98□□□□□ -1.93
UBE2A-203ENST00000371569 Q8N3U1 123 aa2.98□□□□□ -1.93
UBE2A-203ENST00000371569 USTQ9Y2C2 406 aa2.98□□□□□ -1.93
UBE2A-203ENST00000371569 LAMC3Q9Y6N6 1575 aa2.98□□□□□ -1.93
UBE2A-203ENST00000371569 COBLO75128 1261 aa2.98□□□□□ -1.93
UBE2A-203ENST00000371569 MFAP1P55081 439 aaKnown RBP2.98□□□□□ -1.93
UBE2A-203ENST00000371569 FUT2Q10981 343 aa2.98□□□□□ -1.93
UBE2A-203ENST00000371569 FAM174AQ8TBP5 190 aa2.98□□□□□ -1.93
UBE2A-203ENST00000371569 MAN1A2O60476 641 aa2.97□□□□□ -1.93
UBE2A-203ENST00000371569 BRD1O95696 1058 aa2.97□□□□□ -1.93
UBE2A-203ENST00000371569 VEGFBP49765 207 aa2.97□□□□□ -1.93
UBE2A-203ENST00000371569 NR5A1Q13285 461 aa2.97□□□□□ -1.93
UBE2A-203ENST00000371569 KIF21AQ7Z4S6 1674 aa2.97□□□□□ -1.93
UBE2A-203ENST00000371569 PODNQ7Z5L7 613 aa2.97□□□□□ -1.93
UBE2A-203ENST00000371569 BEND7Q8N7W2 519 aaPredicted RBP2.97□□□□□ -1.93
UBE2A-203ENST00000371569 TRIM52Q96A61 297 aa2.97□□□□□ -1.93
UBE2A-203ENST00000371569 GZF1Q9H116 711 aaPredicted RBP2.97□□□□□ -1.93
UBE2A-203ENST00000371569 IRF5Q13568 498 aa2.97□□□□□ -1.93
UBE2A-203ENST00000371569 SV2AQ7L0J3 742 aa2.97□□□□□ -1.93
UBE2A-203ENST00000371569 METTL3Q86U44 580 aaKnown RBP2.97□□□□□ -1.93
UBE2A-203ENST00000371569 POLR3EQ9NVU0 708 aa2.97□□□□□ -1.93
UBE2A-203ENST00000371569 AMOTL2Q9Y2J4 779 aa2.97□□□□□ -1.93
UBE2A-203ENST00000371569 SMARCA2P51531 1590 aa2.96□□□□□ -1.93
UBE2A-203ENST00000371569 MRC2Q9UBG0 1479 aa2.96□□□□□ -1.93
UBE2A-203ENST00000371569 CALR3Q96L12 384 aaKnown RBP2.96□□□□□ -1.94
UBE2A-203ENST00000371569 CNTNAP3BQ96NU0 1288 aa2.96□□□□□ -1.94
UBE2A-203ENST00000371569 CDK15Q96Q40 435 aa2.96□□□□□ -1.94
UBE2A-203ENST00000371569 PHOX2BQ99453 314 aa2.96□□□□□ -1.94
UBE2A-203ENST00000371569 TBC1D2Q9BYX2 928 aa2.96□□□□□ -1.94
UBE2A-203ENST00000371569 CNTNAP3Q9BZ76 1288 aa2.96□□□□□ -1.94
UBE2A-203ENST00000371569 SNRKQ9NRH2 765 aa2.96□□□□□ -1.94
UBE2A-203ENST00000371569 ATP1B4Q9UN42 357 aaPredicted RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms