RNA–Protein interactions for RNA: ENST00000370228.1

TWNK-202, Transcript of twinkle mtDNA helicase, humanhuman

TSL 1 (best) BASIC

Gene TWNK, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-202ENST00000370228 MSH6P52701 1360 aa13.67□□□□□ -0.22
TWNK-202ENST00000370228 SLC20A2Q08357 652 aa13.67□□□□□ -0.22
TWNK-202ENST00000370228 MYCNP04198 464 aaPredicted RBP13.66□□□□□ -0.22
TWNK-202ENST00000370228 CERS3Q8IU89 383 aa13.66□□□□□ -0.22
TWNK-202ENST00000370228 MYH16Q9H6N6 1097 aa13.65□□□□□ -0.22
TWNK-202ENST00000370228 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
TWNK-202ENST00000370228 FAM193AP78312 1265 aa13.65□□□□□ -0.22
TWNK-202ENST00000370228 CCDC61Q9Y6R9 512 aa13.65□□□□□ -0.22
TWNK-202ENST00000370228 LRRC7Q96NW7 1537 aa13.65□□□□□ -0.22
TWNK-202ENST00000370228 ARHGEF28Q8N1W1 1705 aaKnown RBP13.65□□□□□ -0.22
TWNK-202ENST00000370228 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.65□□□□□ -0.22
TWNK-202ENST00000370228 PSME1Q06323 249 aa13.65□□□□□ -0.23
TWNK-202ENST00000370228 GGNBP2Q9H3C7 697 aa13.65□□□□□ -0.23
TWNK-202ENST00000370228 ACEP12821 1306 aa13.64□□□□□ -0.23
TWNK-202ENST00000370228 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.64□□□□□ -0.23
TWNK-202ENST00000370228 CABLES1Q8TDN4 633 aa13.64□□□□□ -0.23
TWNK-202ENST00000370228 CARD14Q9BXL6 1004 aa13.64□□□□□ -0.23
TWNK-202ENST00000370228 MRE11P49959 708 aa13.64□□□□□ -0.23
TWNK-202ENST00000370228 TULP4Q9NRJ4 1543 aa13.63□□□□□ -0.23
TWNK-202ENST00000370228 QRICH2Q9H0J4 1663 aa13.63□□□□□ -0.23
TWNK-202ENST00000370228 CADPS2Q86UW7 1296 aa13.63□□□□□ -0.23
TWNK-202ENST00000370228 CHD2O14647 1828 aaKnown RBP13.63□□□□□ -0.23
TWNK-202ENST00000370228 IRX5P78411 483 aaPredicted RBP13.63□□□□□ -0.23
TWNK-202ENST00000370228 TMED8Q6PL24 325 aaPredicted RBP13.63□□□□□ -0.23
TWNK-202ENST00000370228 CERKQ8TCT0 537 aa13.63□□□□□ -0.23
TWNK-202ENST00000370228 TRIM44Q96DX7 344 aaPredicted RBP13.63□□□□□ -0.23
TWNK-202ENST00000370228 PHF8Q9UPP1 1060 aa13.63□□□□□ -0.23
TWNK-202ENST00000370228 PIK3R4Q99570 1358 aa13.63□□□□□ -0.23
TWNK-202ENST00000370228 CGNQ9P2M7 1197 aaKnown RBP13.62□□□□□ -0.23
TWNK-202ENST00000370228 PPIP5K1Q6PFW1 1433 aa13.62□□□□□ -0.23
TWNK-202ENST00000370228 PNISRQ8TF01 805 aaKnown RBP13.62□□□□□ -0.23
TWNK-202ENST00000370228 NME9Q86XW9 330 aa13.61□□□□□ -0.23
TWNK-202ENST00000370228 NGEFQ8N5V2 710 aa13.61□□□□□ -0.23
TWNK-202ENST00000370228 GRIPAP1Q4V328 841 aa13.61□□□□□ -0.23
TWNK-202ENST00000370228 BRINP3Q76B58 766 aa13.61□□□□□ -0.23
TWNK-202ENST00000370228 LAMC1P11047 1609 aa13.61□□□□□ -0.23
TWNK-202ENST00000370228 TECPR2O15040 1411 aa13.61□□□□□ -0.23
TWNK-202ENST00000370228 PTCH1Q13635 1447 aa13.61□□□□□ -0.23
TWNK-202ENST00000370228 APPP05067 770 aa13.61□□□□□ -0.23
TWNK-202ENST00000370228 FAM135BQ49AJ0 1406 aa13.6□□□□□ -0.23
TWNK-202ENST00000370228 ADGRL3Q9HAR2 1447 aa13.6□□□□□ -0.23
TWNK-202ENST00000370228 DYNC1I1O14576 645 aa13.6□□□□□ -0.23
TWNK-202ENST00000370228 EXOC6Q8TAG9 804 aa13.6□□□□□ -0.23
TWNK-202ENST00000370228 ZNF622Q969S3 477 aaKnown RBP eCLIP13.6□□□□□ -0.23
TWNK-202ENST00000370228 DNAJC2Q99543 621 aaKnown RBP13.6□□□□□ -0.23
TWNK-202ENST00000370228 RCAN3Q9UKA8 241 aa13.6□□□□□ -0.23
TWNK-202ENST00000370228 KNSTRNQ9Y448 316 aa13.6□□□□□ -0.23
TWNK-202ENST00000370228 PATL2C9JE40 543 aaKnown RBP13.59□□□□□ -0.23
TWNK-202ENST00000370228 RRP1P56182 461 aaKnown RBP13.59□□□□□ -0.23
TWNK-202ENST00000370228 CDCA8Q53HL2 280 aa13.59□□□□□ -0.23
TWNK-202ENST00000370228 AEBP1Q8IUX7 1158 aa13.59□□□□□ -0.23
TWNK-202ENST00000370228 KIAA1210Q9ULL0 1709 aa13.59□□□□□ -0.23
TWNK-202ENST00000370228 A0A1W2PP64 1363 aa13.59□□□□□ -0.23
TWNK-202ENST00000370228 AXDND1Q5T1B0 1012 aaPredicted RBP13.59□□□□□ -0.23
TWNK-202ENST00000370228 XRN1Q8IZH2 1706 aaKnown RBP13.58□□□□□ -0.24
TWNK-202ENST00000370228 UQCRHLA0A096LP55 91 aa13.58□□□□□ -0.24
TWNK-202ENST00000370228 UQCRHP07919 91 aa13.58□□□□□ -0.24
TWNK-202ENST00000370228 ABTB2Q8N961 1025 aa13.58□□□□□ -0.24
TWNK-202ENST00000370228 NALCNQ8IZF0 1738 aa13.58□□□□□ -0.24
TWNK-202ENST00000370228 DIP2AQ14689 1571 aa13.58□□□□□ -0.24
TWNK-202ENST00000370228 NUTM2BA6NNL0 878 aaPredicted RBP13.57□□□□□ -0.24
TWNK-202ENST00000370228 NUTM2EB1AL46 878 aaPredicted RBP13.57□□□□□ -0.24
TWNK-202ENST00000370228 PTMAP06454 111 aaKnown RBP13.57□□□□□ -0.24
TWNK-202ENST00000370228 HDGFL2Q7Z4V5 671 aaPredicted RBP13.57□□□□□ -0.24
TWNK-202ENST00000370228 NUTM2AQ8IVF1 878 aaPredicted RBP13.57□□□□□ -0.24
TWNK-202ENST00000370228 RGPD8O14715 1765 aaPredicted RBP13.57□□□□□ -0.24
TWNK-202ENST00000370228 CPS1P31327 1500 aa13.57□□□□□ -0.24
TWNK-202ENST00000370228 KTN1Q86UP2 1357 aaKnown RBP13.57□□□□□ -0.24
TWNK-202ENST00000370228 TOM1O60784 492 aa13.57□□□□□ -0.24
TWNK-202ENST00000370228 R3HCC1Q9Y3T6 440 aaKnown RBP13.57□□□□□ -0.24
TWNK-202ENST00000370228 EP400Q96L91 3159 aa13.56□□□□□ -0.24
TWNK-202ENST00000370228 RALBP1Q15311 655 aa13.56□□□□□ -0.24
TWNK-202ENST00000370228 KRT28Q7Z3Y7 464 aa13.56□□□□□ -0.24
TWNK-202ENST00000370228 GRPEL1Q9HAV7 217 aa13.56□□□□□ -0.24
TWNK-202ENST00000370228 TERF2IPQ9NYB0 399 aa13.56□□□□□ -0.24
TWNK-202ENST00000370228 MYBBP1AQ9BQG0 1328 aaKnown RBP13.56□□□□□ -0.24
TWNK-202ENST00000370228 NLRP6P59044 892 aa13.56□□□□□ -0.24
TWNK-202ENST00000370228 SIRT1Q96EB6 747 aa13.56□□□□□ -0.24
TWNK-202ENST00000370228 NSD3Q9BZ95 1437 aa13.55□□□□□ -0.24
TWNK-202ENST00000370228 ATP7BP35670 1465 aa13.55□□□□□ -0.24
TWNK-202ENST00000370228 RRS1Q15050 365 aaKnown RBP13.55□□□□□ -0.24
TWNK-202ENST00000370228 C1orf167Q5SNV9 1468 aa13.54□□□□□ -0.24
TWNK-202ENST00000370228 LTBP4Q8N2S1 1624 aa13.54□□□□□ -0.24
TWNK-202ENST00000370228 NKTRP30414 1462 aaKnown RBP13.54□□□□□ -0.24
TWNK-202ENST00000370228 ZC3H6P61129 1189 aaKnown RBP13.54□□□□□ -0.24
TWNK-202ENST00000370228 CHMP4CQ96CF2 233 aa13.54□□□□□ -0.24
TWNK-202ENST00000370228 ATAD2Q6PL18 1390 aa13.53□□□□□ -0.24
TWNK-202ENST00000370228 DLC1Q96QB1 1528 aa13.53□□□□□ -0.24
TWNK-202ENST00000370228 MST1RQ04912 1400 aa13.53□□□□□ -0.24
TWNK-202ENST00000370228 ADAMTS2O95450 1211 aa13.53□□□□□ -0.24
TWNK-202ENST00000370228 ZSCAN30Q86W11 494 aa13.53□□□□□ -0.24
TWNK-202ENST00000370228 TICAM2Q86XR7 235 aa13.53□□□□□ -0.24
TWNK-202ENST00000370228 GEMIN8Q9NWZ8 242 aaKnown RBP13.53□□□□□ -0.24
TWNK-202ENST00000370228 TAOK2Q9UL54 1235 aa13.53□□□□□ -0.24
TWNK-202ENST00000370228 BRD4O60885 1362 aaPredicted RBP13.52□□□□□ -0.24
TWNK-202ENST00000370228 YY1AP1Q9H869 796 aa13.52□□□□□ -0.24
TWNK-202ENST00000370228 FYB1O15117 783 aa13.52□□□□□ -0.25
TWNK-202ENST00000370228 PER1O15534 1290 aaPredicted RBP13.52□□□□□ -0.25
TWNK-202ENST00000370228 CBX1P83916 185 aa13.52□□□□□ -0.25
TWNK-202ENST00000370228 SBNO2Q9Y2G9 1366 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms