RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 FIBPO43427 364 aa10.19□□□□□ -0.78
ABCA4-201ENST00000370225 WAPLQ7Z5K2 1190 aa10.19□□□□□ -0.78
ABCA4-201ENST00000370225 LRRCC1Q9C099 1032 aa10.19□□□□□ -0.78
ABCA4-201ENST00000370225 ABCF2Q9UG63 623 aa10.19□□□□□ -0.78
ABCA4-201ENST00000370225 PDZRN3Q9UPQ7 1066 aa10.19□□□□□ -0.78
ABCA4-201ENST00000370225 C9orf84Q5VXU9 1444 aa10.19□□□□□ -0.78
ABCA4-201ENST00000370225 SSBP05455 408 aaKnown RBP eCLIP10.18□□□□□ -0.78
ABCA4-201ENST00000370225 ZNF692Q9BU19 519 aaPredicted RBP10.18□□□□□ -0.78
ABCA4-201ENST00000370225 TANGO6Q9C0B7 1094 aa10.18□□□□□ -0.78
ABCA4-201ENST00000370225 SRCIN1Q9C0H9 1055 aa10.18□□□□□ -0.78
ABCA4-201ENST00000370225 KIF21BO75037 1637 aa10.18□□□□□ -0.78
ABCA4-201ENST00000370225 HIP1O00291 1037 aa10.18□□□□□ -0.78
ABCA4-201ENST00000370225 ZPR1O75312 459 aa10.18□□□□□ -0.78
ABCA4-201ENST00000370225 STK38Q15208 465 aa10.18□□□□□ -0.78
ABCA4-201ENST00000370225 MPRIPQ6WCQ1 1025 aa10.18□□□□□ -0.78
ABCA4-201ENST00000370225 PDCL3Q9H2J4 239 aa10.18□□□□□ -0.78
ABCA4-201ENST00000370225 KINO60870 393 aaKnown RBP10.18□□□□□ -0.78
ABCA4-201ENST00000370225 IDH1O75874 414 aaKnown RBP10.18□□□□□ -0.78
ABCA4-201ENST00000370225 SOGA3Q5TF21 947 aa10.18□□□□□ -0.78
ABCA4-201ENST00000370225 ZNF76P36508 570 aa10.18□□□□□ -0.78
ABCA4-201ENST00000370225 TTLL12Q14166 644 aaPredicted RBP10.17□□□□□ -0.78
ABCA4-201ENST00000370225 IL1RAPL2Q9NP60 686 aa10.17□□□□□ -0.78
ABCA4-201ENST00000370225 FAM13BQ9NYF5 915 aa10.17□□□□□ -0.78
ABCA4-201ENST00000370225 ANKIB1Q9P2G1 1089 aa10.17□□□□□ -0.78
ABCA4-201ENST00000370225 IGHMBP2P38935 993 aaKnown RBP10.17□□□□□ -0.78
ABCA4-201ENST00000370225 HSP90AA2PQ14568 343 aaPredicted RBP10.17□□□□□ -0.78
ABCA4-201ENST00000370225 CAVIN1Q6NZI2 390 aaKnown RBP10.17□□□□□ -0.78
ABCA4-201ENST00000370225 SRGAP3O43295 1099 aa10.17□□□□□ -0.78
ABCA4-201ENST00000370225 CWC27Q6UX04 472 aaKnown RBP10.17□□□□□ -0.78
ABCA4-201ENST00000370225 AK7Q96M32 723 aa10.17□□□□□ -0.78
ABCA4-201ENST00000370225 SNAPC4Q5SXM2 1469 aa10.17□□□□□ -0.78
ABCA4-201ENST00000370225 PRPF40AO75400 957 aaKnown RBP10.17□□□□□ -0.78
ABCA4-201ENST00000370225 TRIM5Q9C035 493 aa10.17□□□□□ -0.78
ABCA4-201ENST00000370225 TMOD3Q9NYL9 352 aa10.17□□□□□ -0.78
ABCA4-201ENST00000370225 CCDC173Q0VFZ6 552 aa10.16□□□□□ -0.78
ABCA4-201ENST00000370225 SEPT11Q9NVA2 429 aaKnown RBP10.16□□□□□ -0.78
ABCA4-201ENST00000370225 CCT4P50991 539 aaKnown RBP10.16□□□□□ -0.78
ABCA4-201ENST00000370225 SPC24Q8NBT2 197 aa10.16□□□□□ -0.78
ABCA4-201ENST00000370225 CASKIN1Q8WXD9 1431 aa10.16□□□□□ -0.78
ABCA4-201ENST00000370225 MCM10Q7L590 875 aa10.16□□□□□ -0.78
ABCA4-201ENST00000370225 TRIM22Q8IYM9 498 aa10.16□□□□□ -0.78
ABCA4-201ENST00000370225 STARD3NLO95772 234 aa10.15□□□□□ -0.78
ABCA4-201ENST00000370225 PNISRQ8TF01 805 aaKnown RBP10.15□□□□□ -0.78
ABCA4-201ENST00000370225 MRC2Q9UBG0 1479 aa10.15□□□□□ -0.78
ABCA4-201ENST00000370225 CYP46A1Q9Y6A2 500 aa10.15□□□□□ -0.78
ABCA4-201ENST00000370225 DCTN1Q14203 1278 aa10.15□□□□□ -0.78
ABCA4-201ENST00000370225 NUTM1Q86Y26 1132 aa10.15□□□□□ -0.78
ABCA4-201ENST00000370225 NGLY1Q96IV0 654 aa10.15□□□□□ -0.78
ABCA4-201ENST00000370225 STAC3Q96MF2 364 aa10.15□□□□□ -0.78
ABCA4-201ENST00000370225 POGZQ7Z3K3 1410 aa10.15□□□□□ -0.78
ABCA4-201ENST00000370225 NUDT16Q96DE0 195 aaKnown RBP10.15□□□□□ -0.78
ABCA4-201ENST00000370225 ZNF396Q96N95 335 aaPredicted RBP10.15□□□□□ -0.78
ABCA4-201ENST00000370225 CEBPAP49715 358 aaPredicted RBP10.15□□□□□ -0.79
ABCA4-201ENST00000370225 METTL24Q5JXM2 366 aa10.15□□□□□ -0.79
ABCA4-201ENST00000370225 UBAC1Q9BSL1 405 aa10.15□□□□□ -0.79
ABCA4-201ENST00000370225 GNAT3A8MTJ3 354 aa10.14□□□□□ -0.79
ABCA4-201ENST00000370225 WDR78Q5VTH9 848 aa10.14□□□□□ -0.79
ABCA4-201ENST00000370225 THUMPD2Q9BTF0 503 aaKnown RBP10.14□□□□□ -0.79
ABCA4-201ENST00000370225 ME1P48163 572 aa10.14□□□□□ -0.79
ABCA4-201ENST00000370225 SLC4A8Q2Y0W8 1093 aa10.14□□□□□ -0.79
ABCA4-201ENST00000370225 FILIP1LQ4L180 1135 aa10.14□□□□□ -0.79
ABCA4-201ENST00000370225 MPNDQ8N594 471 aa10.14□□□□□ -0.79
ABCA4-201ENST00000370225 BRD4O60885 1362 aaPredicted RBP10.14□□□□□ -0.79
ABCA4-201ENST00000370225 CEP126Q9P2H0 1117 aa10.14□□□□□ -0.79
ABCA4-201ENST00000370225 ZSCAN25Q6NSZ9 544 aa10.14□□□□□ -0.79
ABCA4-201ENST00000370225 CRACR2BQ8N4Y2 399 aaPredicted RBP10.13□□□□□ -0.79
ABCA4-201ENST00000370225 MYD88Q99836 296 aa10.13□□□□□ -0.79
ABCA4-201ENST00000370225 MINDY4BA8MYZ0 360 aa10.13□□□□□ -0.79
ABCA4-201ENST00000370225 TMOD2Q9NZR1 351 aa10.13□□□□□ -0.79
ABCA4-201ENST00000370225 SERPINC1P01008 464 aa10.13□□□□□ -0.79
ABCA4-201ENST00000370225 TEX35Q5T0J7 233 aa10.13□□□□□ -0.79
ABCA4-201ENST00000370225 SMARCE1Q969G3 411 aa10.13□□□□□ -0.79
ABCA4-201ENST00000370225 CC2D2AQ9P2K1 1620 aa10.13□□□□□ -0.79
ABCA4-201ENST00000370225 POLR3DP05423 398 aaPredicted RBP10.13□□□□□ -0.79
ABCA4-201ENST00000370225 AIDAQ96BJ3 306 aa10.13□□□□□ -0.79
ABCA4-201ENST00000370225 NASPP49321 788 aaPredicted RBP10.12□□□□□ -0.79
ABCA4-201ENST00000370225 GCC1Q96CN9 775 aa10.12□□□□□ -0.79
ABCA4-201ENST00000370225 SCLT1Q96NL6 688 aa10.12□□□□□ -0.79
ABCA4-201ENST00000370225 FOXO3O43524 673 aa10.12□□□□□ -0.79
ABCA4-201ENST00000370225 VSIG10Q8N0Z9 540 aa10.12□□□□□ -0.79
ABCA4-201ENST00000370225 DEF6Q9H4E7 631 aa10.12□□□□□ -0.79
ABCA4-201ENST00000370225 SLC52A1Q9NWF4 448 aa10.12□□□□□ -0.79
ABCA4-201ENST00000370225 RDXP35241 583 aaKnown RBP10.12□□□□□ -0.79
ABCA4-201ENST00000370225 JAKMIP1Q96N16 626 aaKnown RBP10.12□□□□□ -0.79
ABCA4-201ENST00000370225 WWC3Q9ULE0 1092 aa10.11□□□□□ -0.79
ABCA4-201ENST00000370225 CDR1P51861 262 aa10.11□□□□□ -0.79
ABCA4-201ENST00000370225 ZNF652Q9Y2D9 606 aa10.11□□□□□ -0.79
ABCA4-201ENST00000370225 GRM1Q13255 1194 aa10.11□□□□□ -0.79
ABCA4-201ENST00000370225 FAM177A1Q8N128 213 aaPredicted RBP10.11□□□□□ -0.79
ABCA4-201ENST00000370225 RPGRQ92834 1020 aaKnown RBP10.11□□□□□ -0.79
ABCA4-201ENST00000370225 TSPY26PQ9H489 355 aa10.11□□□□□ -0.79
ABCA4-201ENST00000370225 ANKRD62A6NC57 917 aa10.11□□□□□ -0.79
ABCA4-201ENST00000370225 TRMT1LQ7Z2T5 733 aaKnown RBP10.11□□□□□ -0.79
ABCA4-201ENST00000370225 NEFHP12036 1026 aa10.11□□□□□ -0.79
ABCA4-201ENST00000370225 GPTP24298 496 aa10.11□□□□□ -0.79
ABCA4-201ENST00000370225 DDX11Q96FC9 970 aa10.11□□□□□ -0.79
ABCA4-201ENST00000370225 NSD3Q9BZ95 1437 aa10.1□□□□□ -0.79
ABCA4-201ENST00000370225 SMARCA5O60264 1052 aaPredicted RBP10.1□□□□□ -0.79
ABCA4-201ENST00000370225 PDRG1Q9NUG6 133 aa10.1□□□□□ -0.79
ABCA4-201ENST00000370225 NBPF8Q3BBV2 869 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms