RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 USP35Q9P2H5 1018 aa20.24■□□□□ 0.83
SSR4-203ENST00000370086 OVOS2A0A0J9YW53 1432 aa20.23■□□□□ 0.83
SSR4-203ENST00000370086 CDCA8Q53HL2 280 aa20.23■□□□□ 0.83
SSR4-203ENST00000370086 OVOS2Q6IE36 1432 aa20.23■□□□□ 0.83
SSR4-203ENST00000370086 CRB1P82279 1406 aa20.2■□□□□ 0.82
SSR4-203ENST00000370086 HSPA5P11021 654 aaKnown RBP20.2■□□□□ 0.82
SSR4-203ENST00000370086 EIF4G2P78344 907 aaKnown RBP eCLIP20.2■□□□□ 0.82
SSR4-203ENST00000370086 BARGINQ6ZT62 677 aa20.2■□□□□ 0.82
SSR4-203ENST00000370086 WNK3Q9BYP7 1800 aa20.2■□□□□ 0.82
SSR4-203ENST00000370086 ABCC6O95255 1503 aa20.19■□□□□ 0.82
SSR4-203ENST00000370086 KIF20BQ96Q89 1820 aa20.19■□□□□ 0.82
SSR4-203ENST00000370086 TCP11L2Q8N4U5 519 aa20.19■□□□□ 0.82
SSR4-203ENST00000370086 FAM182BQ5T319 152 aa20.18■□□□□ 0.82
SSR4-203ENST00000370086 CCDC125Q86Z20 511 aa20.18■□□□□ 0.82
SSR4-203ENST00000370086 THRAP3Q9Y2W1 955 aaKnown RBP20.18■□□□□ 0.82
SSR4-203ENST00000370086 PARP4Q9UKK3 1724 aaKnown RBP20.18■□□□□ 0.82
SSR4-203ENST00000370086 WDR17Q8IZU2 1322 aa20.17■□□□□ 0.82
SSR4-203ENST00000370086 BLMP54132 1417 aaPredicted RBP20.17■□□□□ 0.82
SSR4-203ENST00000370086 TOM1L2Q6ZVM7 507 aa20.16■□□□□ 0.82
SSR4-203ENST00000370086 FYB1O15117 783 aa20.14■□□□□ 0.81
SSR4-203ENST00000370086 COG3Q96JB2 828 aa20.14■□□□□ 0.81
SSR4-203ENST00000370086 CARD14Q9BXL6 1004 aa20.14■□□□□ 0.81
SSR4-203ENST00000370086 RGPD1P0DJD0 1748 aa20.13■□□□□ 0.81
SSR4-203ENST00000370086 LRRC37A3O60309 1634 aa20.13■□□□□ 0.81
SSR4-203ENST00000370086 CSB-PGBD3P0DP91 1061 aa20.12■□□□□ 0.81
SSR4-203ENST00000370086 FBLN1P23142 703 aa20.12■□□□□ 0.81
SSR4-203ENST00000370086 GGNBP2Q9H3C7 697 aa20.12■□□□□ 0.81
SSR4-203ENST00000370086 TNS1Q9HBL0 1735 aaKnown RBP20.11■□□□□ 0.81
SSR4-203ENST00000370086 POLR3GLQ9BT43 218 aa20.11■□□□□ 0.81
SSR4-203ENST00000370086 CARD10Q9BWT7 1032 aa20.11■□□□□ 0.81
SSR4-203ENST00000370086 NSD3Q9BZ95 1437 aa20.1■□□□□ 0.81
SSR4-203ENST00000370086 ERBB3P21860 1342 aa20.09■□□□□ 0.81
SSR4-203ENST00000370086 PDE3BQ13370 1112 aa20.09■□□□□ 0.81
SSR4-203ENST00000370086 DEFB132Q7Z7B7 95 aa20.09■□□□□ 0.81
SSR4-203ENST00000370086 MAP3K19Q56UN5 1328 aa20.08■□□□□ 0.81
SSR4-203ENST00000370086 C11orf95C9JLR9 678 aaPredicted RBP20.08■□□□□ 0.81
SSR4-203ENST00000370086 SF3B2Q13435 895 aaKnown RBP20.08■□□□□ 0.81
SSR4-203ENST00000370086 IP6K1Q92551 441 aa20.08■□□□□ 0.81
SSR4-203ENST00000370086 RGPD2P0DJD1 1756 aa20.08■□□□□ 0.8
SSR4-203ENST00000370086 PEAK1Q9H792 1746 aa20.07■□□□□ 0.8
SSR4-203ENST00000370086 ANKRD24Q8TF21 1146 aa20.07■□□□□ 0.8
SSR4-203ENST00000370086 DISP2A7MBM2 1401 aa20.07■□□□□ 0.8
SSR4-203ENST00000370086 FAM208AQ9UK61 1670 aaKnown RBP20.07■□□□□ 0.8
SSR4-203ENST00000370086 FAM196AQ6ZSG2 479 aa20.06■□□□□ 0.8
SSR4-203ENST00000370086 SBF2Q86WG5 1849 aa20.06■□□□□ 0.8
SSR4-203ENST00000370086 CCDC7Q96M83 1385 aa20.05■□□□□ 0.8
SSR4-203ENST00000370086 HOXC9P31274 260 aa20.04■□□□□ 0.8
SSR4-203ENST00000370086 RRS1Q15050 365 aaKnown RBP20.04■□□□□ 0.8
SSR4-203ENST00000370086 DDB1Q16531 1140 aa20.04■□□□□ 0.8
SSR4-203ENST00000370086 NLRP2Q9NX02 1062 aa20.04■□□□□ 0.8
SSR4-203ENST00000370086 ANKRD26Q9UPS8 1709 aa20.04■□□□□ 0.8
SSR4-203ENST00000370086 TRIM37O94972 964 aa20.03■□□□□ 0.8
SSR4-203ENST00000370086 CDCA7Q9BWT1 371 aaPredicted RBP20.03■□□□□ 0.8
SSR4-203ENST00000370086 MAP2P11137 1827 aaKnown RBP20.02■□□□□ 0.8
SSR4-203ENST00000370086 AMPHP49418 695 aa20.02■□□□□ 0.8
SSR4-203ENST00000370086 LTV1Q96GA3 475 aaPredicted RBP20.02■□□□□ 0.8
SSR4-203ENST00000370086 BAG6P46379 1132 aa20.01■□□□□ 0.79
SSR4-203ENST00000370086 PANK3Q9H999 370 aa20■□□□□ 0.79
SSR4-203ENST00000370086 CGNL1Q0VF96 1302 aa20■□□□□ 0.79
SSR4-203ENST00000370086 RTL1A6NKG5 1358 aa19.99■□□□□ 0.79
SSR4-203ENST00000370086 EN1Q05925 392 aaPredicted RBP19.99■□□□□ 0.79
SSR4-203ENST00000370086 MARCH10Q8NA82 808 aaPredicted RBP19.99■□□□□ 0.79
SSR4-203ENST00000370086 OVOS2A0A0G2JMS6 1433 aa19.99■□□□□ 0.79
SSR4-203ENST00000370086 EXOC5O00471 708 aa19.98■□□□□ 0.79
SSR4-203ENST00000370086 TNS2Q63HR2 1409 aa19.97■□□□□ 0.79
SSR4-203ENST00000370086 KIF7Q2M1P5 1343 aa19.97■□□□□ 0.79
SSR4-203ENST00000370086 IL2RBP14784 551 aa19.96■□□□□ 0.79
SSR4-203ENST00000370086 APBA3O96018 575 aa19.95■□□□□ 0.78
SSR4-203ENST00000370086 HSP90AB2PQ58FF8 381 aa19.95■□□□□ 0.78
SSR4-203ENST00000370086 EMILIN1Q9Y6C2 1016 aa19.95■□□□□ 0.78
SSR4-203ENST00000370086 EZH2Q15910 746 aaKnown RBP19.94■□□□□ 0.78
SSR4-203ENST00000370086 INSRP06213 1382 aa19.94■□□□□ 0.78
SSR4-203ENST00000370086 FLT4P35916 1363 aa19.94■□□□□ 0.78
SSR4-203ENST00000370086 KIF24Q5T7B8 1368 aa19.94■□□□□ 0.78
SSR4-203ENST00000370086 RREB1Q92766 1687 aa19.94■□□□□ 0.78
SSR4-203ENST00000370086 BCL9O00512 1426 aa19.93■□□□□ 0.78
SSR4-203ENST00000370086 CAMKK2Q96RR4 588 aa19.93■□□□□ 0.78
SSR4-203ENST00000370086 SHANK3Q9BYB0 1731 aa19.93■□□□□ 0.78
SSR4-203ENST00000370086 PTF1AQ7RTS3 328 aa19.92■□□□□ 0.78
SSR4-203ENST00000370086 NBPF6Q5VWK0 638 aa19.91■□□□□ 0.78
SSR4-203ENST00000370086 NBPF4Q96M43 638 aa19.91■□□□□ 0.78
SSR4-203ENST00000370086 NUP188Q5SRE5 1749 aa19.9■□□□□ 0.78
SSR4-203ENST00000370086 SMG6Q86US8 1419 aaKnown RBP19.9■□□□□ 0.78
SSR4-203ENST00000370086 RGPD3A6NKT7 1758 aaPredicted RBP19.9■□□□□ 0.78
SSR4-203ENST00000370086 RGPD4Q7Z3J3 1758 aa19.9■□□□□ 0.78
SSR4-203ENST00000370086 PPM1GO15355 546 aaPredicted RBP19.89■□□□□ 0.77
SSR4-203ENST00000370086 MEGF6O75095 1541 aa19.89■□□□□ 0.77
SSR4-203ENST00000370086 TNNT2P45379 298 aaPredicted RBP19.89■□□□□ 0.77
SSR4-203ENST00000370086 NHSQ6T4R5 1651 aa19.89■□□□□ 0.77
SSR4-203ENST00000370086 USHBP1Q8N6Y0 703 aa19.89■□□□□ 0.77
SSR4-203ENST00000370086 POLKQ9UBT6 870 aa19.89■□□□□ 0.77
SSR4-203ENST00000370086 NSD2O96028 1365 aa19.88■□□□□ 0.77
SSR4-203ENST00000370086 BCL11BQ9C0K0 894 aaPredicted RBP19.88■□□□□ 0.77
SSR4-203ENST00000370086 KAT6BQ8WYB5 2073 aa19.87■□□□□ 0.77
SSR4-203ENST00000370086 PARD3Q8TEW0 1356 aa19.87■□□□□ 0.77
SSR4-203ENST00000370086 WASHC2AQ641Q2 1341 aa19.86■□□□□ 0.77
SSR4-203ENST00000370086 KNSTRNQ9Y448 316 aa19.86■□□□□ 0.77
SSR4-203ENST00000370086 KCNQ2O43526 872 aa19.85■□□□□ 0.77
SSR4-203ENST00000370086 BTAF1O14981 1849 aa19.84■□□□□ 0.77
SSR4-203ENST00000370086 PSDA5PKW4 1024 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms