RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 MIS18AQ9NYP9 233 aa14.53□□□□□ -0.08
RAB39B-201ENST00000369454 MAP2P11137 1827 aaKnown RBP14.53□□□□□ -0.08
RAB39B-201ENST00000369454 FAM135BQ49AJ0 1406 aa14.52□□□□□ -0.08
RAB39B-201ENST00000369454 MED14O60244 1454 aa14.52□□□□□ -0.08
RAB39B-201ENST00000369454 ROBO2Q9HCK4 1378 aa14.52□□□□□ -0.08
RAB39B-201ENST00000369454 NCBP3Q53F19 620 aaKnown RBP14.52□□□□□ -0.08
RAB39B-201ENST00000369454 ACEP12821 1306 aa14.52□□□□□ -0.08
RAB39B-201ENST00000369454 NUTM2GQ5VZR2 741 aa14.52□□□□□ -0.09
RAB39B-201ENST00000369454 TBC1D32Q96NH3 1257 aa14.52□□□□□ -0.09
RAB39B-201ENST00000369454 ARXQ96QS3 562 aa14.52□□□□□ -0.09
RAB39B-201ENST00000369454 CPS1P31327 1500 aa14.52□□□□□ -0.09
RAB39B-201ENST00000369454 EDC4Q6P2E9 1401 aaKnown RBP14.52□□□□□ -0.09
RAB39B-201ENST00000369454 GSE1Q14687 1217 aa14.52□□□□□ -0.09
RAB39B-201ENST00000369454 TNRQ92752 1358 aa14.51□□□□□ -0.09
RAB39B-201ENST00000369454 APBB1O00213 710 aa14.51□□□□□ -0.09
RAB39B-201ENST00000369454 HDAC1Q13547 482 aaPredicted RBP14.51□□□□□ -0.09
RAB39B-201ENST00000369454 ALDH1L2Q3SY69 923 aa14.51□□□□□ -0.09
RAB39B-201ENST00000369454 MRPL50Q8N5N7 158 aaKnown RBP14.51□□□□□ -0.09
RAB39B-201ENST00000369454 TBC1D2Q9BYX2 928 aa14.51□□□□□ -0.09
RAB39B-201ENST00000369454 ATP7BP35670 1465 aa14.51□□□□□ -0.09
RAB39B-201ENST00000369454 C22orf23Q9BZE7 217 aa14.5□□□□□ -0.09
RAB39B-201ENST00000369454 EIF4A2Q14240 407 aaKnown RBP14.5□□□□□ -0.09
RAB39B-201ENST00000369454 CPSF1Q10570 1443 aaKnown RBP14.5□□□□□ -0.09
RAB39B-201ENST00000369454 KIF20BQ96Q89 1820 aa14.49□□□□□ -0.09
RAB39B-201ENST00000369454 SPATA31D1Q6ZQQ2 1576 aa14.49□□□□□ -0.09
RAB39B-201ENST00000369454 CALD1Q05682 793 aaKnown RBP14.49□□□□□ -0.09
RAB39B-201ENST00000369454 SMC5Q8IY18 1101 aa14.49□□□□□ -0.09
RAB39B-201ENST00000369454 IFT57Q9NWB7 429 aa14.49□□□□□ -0.09
RAB39B-201ENST00000369454 ZBTB7BO15156 539 aaPredicted RBP14.48□□□□□ -0.09
RAB39B-201ENST00000369454 CHD1LQ86WJ1 897 aa14.48□□□□□ -0.09
RAB39B-201ENST00000369454 TTC21BQ7Z4L5 1316 aa14.48□□□□□ -0.09
RAB39B-201ENST00000369454 FOXO3O43524 673 aa14.48□□□□□ -0.09
RAB39B-201ENST00000369454 CFAP44Q96MT7 982 aa14.48□□□□□ -0.09
RAB39B-201ENST00000369454 ZNF692Q9BU19 519 aaPredicted RBP14.48□□□□□ -0.09
RAB39B-201ENST00000369454 TMEM2Q9UHN6 1383 aa14.47□□□□□ -0.09
RAB39B-201ENST00000369454 NGDNQ8NEJ9 315 aaKnown RBP14.47□□□□□ -0.09
RAB39B-201ENST00000369454 RBM33Q96EV2 1170 aaKnown RBP14.47□□□□□ -0.09
RAB39B-201ENST00000369454 ANKRD26Q9UPS8 1709 aa14.47□□□□□ -0.09
RAB39B-201ENST00000369454 AGLP35573 1532 aa14.47□□□□□ -0.09
RAB39B-201ENST00000369454 C14orf37Q86TY3 774 aa14.46□□□□□ -0.09
RAB39B-201ENST00000369454 BRPF3Q9ULD4 1205 aa14.46□□□□□ -0.09
RAB39B-201ENST00000369454 NUCB1Q02818 461 aa14.46□□□□□ -0.09
RAB39B-201ENST00000369454 AMOTL2Q9Y2J4 779 aa14.46□□□□□ -0.09
RAB39B-201ENST00000369454 LMOD3Q0VAK6 560 aa14.45□□□□□ -0.1
RAB39B-201ENST00000369454 LTV1Q96GA3 475 aaPredicted RBP14.45□□□□□ -0.1
RAB39B-201ENST00000369454 DLC1Q96QB1 1528 aa14.45□□□□□ -0.1
RAB39B-201ENST00000369454 SIRT2Q8IXJ6 389 aa14.45□□□□□ -0.1
RAB39B-201ENST00000369454 NECTIN2Q92692 538 aa14.45□□□□□ -0.1
RAB39B-201ENST00000369454 EID1Q9Y6B2 187 aa14.45□□□□□ -0.1
RAB39B-201ENST00000369454 ZNF853P0CG23 659 aa14.44□□□□□ -0.1
RAB39B-201ENST00000369454 NRXN3Q9Y4C0 1643 aa14.44□□□□□ -0.1
RAB39B-201ENST00000369454 FOXD4L1Q9NU39 408 aa14.44□□□□□ -0.1
RAB39B-201ENST00000369454 ZBTB7CA1YPR0 619 aa14.43□□□□□ -0.1
RAB39B-201ENST00000369454 SLC4A10Q6U841 1118 aa14.43□□□□□ -0.1
RAB39B-201ENST00000369454 AMPHP49418 695 aa14.42□□□□□ -0.1
RAB39B-201ENST00000369454 CDK12Q9NYV4 1490 aaPredicted RBP14.42□□□□□ -0.1
RAB39B-201ENST00000369454 AATKQ6ZMQ8 1374 aa14.42□□□□□ -0.1
RAB39B-201ENST00000369454 SETD1AO15047 1707 aaKnown RBP14.42□□□□□ -0.1
RAB39B-201ENST00000369454 GZF1Q9H116 711 aaPredicted RBP14.41□□□□□ -0.1
RAB39B-201ENST00000369454 C16orf71Q8IYS4 520 aaPredicted RBP14.41□□□□□ -0.1
RAB39B-201ENST00000369454 ZNF428Q96B54 188 aa14.41□□□□□ -0.1
RAB39B-201ENST00000369454 API5Q9BZZ5 524 aaKnown RBP14.41□□□□□ -0.1
RAB39B-201ENST00000369454 MAP3K19Q56UN5 1328 aa14.41□□□□□ -0.1
RAB39B-201ENST00000369454 ADAMTS13Q76LX8 1427 aa14.4□□□□□ -0.1
RAB39B-201ENST00000369454 F6X3S4 739 aa14.4□□□□□ -0.1
RAB39B-201ENST00000369454 SLC4A2P04920 1241 aa14.4□□□□□ -0.1
RAB39B-201ENST00000369454 NLRP6P59044 892 aa14.4□□□□□ -0.1
RAB39B-201ENST00000369454 VIRMAQ69YN4 1812 aaKnown RBP14.4□□□□□ -0.1
RAB39B-201ENST00000369454 CDC42BPGQ6DT37 1551 aa14.4□□□□□ -0.1
RAB39B-201ENST00000369454 RTF1Q92541 710 aaKnown RBP14.4□□□□□ -0.1
RAB39B-201ENST00000369454 ANTXR1Q9H6X2 564 aa14.39□□□□□ -0.11
RAB39B-201ENST00000369454 SMARCA5O60264 1052 aaPredicted RBP14.39□□□□□ -0.11
RAB39B-201ENST00000369454 MTHFSDQ2M296 383 aaKnown RBP14.39□□□□□ -0.11
RAB39B-201ENST00000369454 HSCBQ8IWL3 235 aa14.39□□□□□ -0.11
RAB39B-201ENST00000369454 ARHGAP45Q92619 1136 aa14.39□□□□□ -0.11
RAB39B-201ENST00000369454 REREQ9P2R6 1566 aa14.39□□□□□ -0.11
RAB39B-201ENST00000369454 ABCC4O15439 1325 aa14.39□□□□□ -0.11
RAB39B-201ENST00000369454 TSPYL4Q9UJ04 414 aa14.38□□□□□ -0.11
RAB39B-201ENST00000369454 GCC1Q96CN9 775 aa14.38□□□□□ -0.11
RAB39B-201ENST00000369454 OTUD7AQ8TE49 926 aaPredicted RBP14.38□□□□□ -0.11
RAB39B-201ENST00000369454 RBM42Q9BTD8 480 aaKnown RBP14.38□□□□□ -0.11
RAB39B-201ENST00000369454 MEIS3Q99687 375 aa14.37□□□□□ -0.11
RAB39B-201ENST00000369454 PTPRUQ92729 1446 aa14.37□□□□□ -0.11
RAB39B-201ENST00000369454 PLEKHG3A1L390 1219 aa14.37□□□□□ -0.11
RAB39B-201ENST00000369454 HSP90AA1P07900 732 aaKnown RBP14.37□□□□□ -0.11
RAB39B-201ENST00000369454 BRPF1P55201 1214 aaPredicted RBP14.37□□□□□ -0.11
RAB39B-201ENST00000369454 TBC1D9Q6ZT07 1266 aa14.37□□□□□ -0.11
RAB39B-201ENST00000369454 G2E3Q7L622 706 aa14.37□□□□□ -0.11
RAB39B-201ENST00000369454 USHBP1Q8N6Y0 703 aa14.37□□□□□ -0.11
RAB39B-201ENST00000369454 SIRT1Q96EB6 747 aa14.37□□□□□ -0.11
RAB39B-201ENST00000369454 CHMP4BQ9H444 224 aaKnown RBP14.36□□□□□ -0.11
RAB39B-201ENST00000369454 CHL1O00533 1208 aa14.36□□□□□ -0.11
RAB39B-201ENST00000369454 USP6P35125 1406 aa14.36□□□□□ -0.11
RAB39B-201ENST00000369454 TRHP20396 242 aaPredicted RBP14.36□□□□□ -0.11
RAB39B-201ENST00000369454 EYA1Q99502 592 aa14.36□□□□□ -0.11
RAB39B-201ENST00000369454 PTCH1Q13635 1447 aa14.35□□□□□ -0.11
RAB39B-201ENST00000369454 DLG5Q8TDM6 1919 aa14.35□□□□□ -0.11
RAB39B-201ENST00000369454 BMP2KLQ5H9B9 411 aa14.35□□□□□ -0.11
RAB39B-201ENST00000369454 TECPR2O15040 1411 aa14.35□□□□□ -0.11
RAB39B-201ENST00000369454 HSP90AB1P08238 724 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms