RNA–Protein interactions for RNA: ENST00000369448.3

FAM46C-201, Transcript of Putative nucleotidyltransferase FAM46C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM46C, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM46C-201ENST00000369448 ZNF692Q9BU19 519 aaPredicted RBP17.83■□□□□ 0.45
FAM46C-201ENST00000369448 MNS1Q8NEH6 495 aa17.83■□□□□ 0.45
FAM46C-201ENST00000369448 SCAF11Q99590 1463 aaKnown RBP17.83■□□□□ 0.44
FAM46C-201ENST00000369448 RAPGEF3O95398 923 aa17.83■□□□□ 0.44
FAM46C-201ENST00000369448 STK3Q13188 491 aa17.83■□□□□ 0.44
FAM46C-201ENST00000369448 WASHC4Q2M389 1173 aa17.83■□□□□ 0.44
FAM46C-201ENST00000369448 RTEL1-TNFRSF6BF6WH68 1400 aa17.83■□□□□ 0.44
FAM46C-201ENST00000369448 ABTB2Q8N961 1025 aa17.83■□□□□ 0.44
FAM46C-201ENST00000369448 A0A0U1RQG5 324 aaPredicted RBP17.83■□□□□ 0.44
FAM46C-201ENST00000369448 KINO60870 393 aaKnown RBP17.83■□□□□ 0.44
FAM46C-201ENST00000369448 TBC1D9Q6ZT07 1266 aa17.83■□□□□ 0.44
FAM46C-201ENST00000369448 NAT10Q9H0A0 1025 aaKnown RBP17.83■□□□□ 0.44
FAM46C-201ENST00000369448 GPATCH8Q9UKJ3 1502 aaKnown RBP17.82■□□□□ 0.44
FAM46C-201ENST00000369448 LARP1BQ659C4 914 aaKnown RBP17.82■□□□□ 0.44
FAM46C-201ENST00000369448 NFXL1Q6ZNB6 911 aa17.82■□□□□ 0.44
FAM46C-201ENST00000369448 DNAJC2Q99543 621 aaKnown RBP17.82■□□□□ 0.44
FAM46C-201ENST00000369448 ABCC11Q96J66 1382 aa17.82■□□□□ 0.44
FAM46C-201ENST00000369448 SRGAP3O43295 1099 aa17.82■□□□□ 0.44
FAM46C-201ENST00000369448 MCM10Q7L590 875 aa17.82■□□□□ 0.44
FAM46C-201ENST00000369448 RALYLQ86SE5 291 aaKnown RBP17.82■□□□□ 0.44
FAM46C-201ENST00000369448 GPS2Q13227 327 aa17.82■□□□□ 0.44
FAM46C-201ENST00000369448 CWC27Q6UX04 472 aaKnown RBP17.82■□□□□ 0.44
FAM46C-201ENST00000369448 BMP2KLQ5H9B9 411 aa17.81■□□□□ 0.44
FAM46C-201ENST00000369448 RAPGEF4Q8WZA2 1011 aa17.81■□□□□ 0.44
FAM46C-201ENST00000369448 XRCC6P12956 609 aaKnown RBP eCLIP17.81■□□□□ 0.44
FAM46C-201ENST00000369448 KRT85P78386 507 aa17.81■□□□□ 0.44
FAM46C-201ENST00000369448 TNNQ9UQP3 1299 aa17.81■□□□□ 0.44
FAM46C-201ENST00000369448 CLSTN1O94985 981 aa17.81■□□□□ 0.44
FAM46C-201ENST00000369448 PLEKHH1Q9ULM0 1364 aa17.8■□□□□ 0.44
FAM46C-201ENST00000369448 TNMDQ9H2S6 317 aa17.8■□□□□ 0.44
FAM46C-201ENST00000369448 GTF2E1P29083 439 aaPredicted RBP17.8■□□□□ 0.44
FAM46C-201ENST00000369448 TESK2Q96S53 571 aa17.8■□□□□ 0.44
FAM46C-201ENST00000369448 HIP1O00291 1037 aa17.8■□□□□ 0.44
FAM46C-201ENST00000369448 TEX35Q5T0J7 233 aa17.8■□□□□ 0.44
FAM46C-201ENST00000369448 PANK2Q9BZ23 570 aa17.8■□□□□ 0.44
FAM46C-201ENST00000369448 SEC24BO95487 1268 aa17.8■□□□□ 0.44
FAM46C-201ENST00000369448 NUTM1Q86Y26 1132 aa17.8■□□□□ 0.44
FAM46C-201ENST00000369448 AEBP1Q8IUX7 1158 aa17.8■□□□□ 0.44
FAM46C-201ENST00000369448 JAKMIP1Q96N16 626 aaKnown RBP17.79■□□□□ 0.44
FAM46C-201ENST00000369448 HOOK1Q9UJC3 728 aaKnown RBP17.79■□□□□ 0.44
FAM46C-201ENST00000369448 SIL1Q9H173 461 aa17.79■□□□□ 0.44
FAM46C-201ENST00000369448 URB2Q14146 1524 aaKnown RBP17.79■□□□□ 0.44
FAM46C-201ENST00000369448 PER1O15534 1290 aaPredicted RBP17.79■□□□□ 0.44
FAM46C-201ENST00000369448 XPCQ01831 940 aaPredicted RBP17.79■□□□□ 0.44
FAM46C-201ENST00000369448 ERC1Q8IUD2 1116 aa17.79■□□□□ 0.44
FAM46C-201ENST00000369448 KDM4AO75164 1064 aa17.79■□□□□ 0.44
FAM46C-201ENST00000369448 WAPLQ7Z5K2 1190 aa17.79■□□□□ 0.44
FAM46C-201ENST00000369448 NLRP2Q9NX02 1062 aa17.79■□□□□ 0.44
FAM46C-201ENST00000369448 ARGLU1Q9NWB6 273 aaPredicted RBP17.78■□□□□ 0.44
FAM46C-201ENST00000369448 EMILIN1Q9Y6C2 1016 aa17.78■□□□□ 0.44
FAM46C-201ENST00000369448 SMC2O95347 1197 aa17.78■□□□□ 0.44
FAM46C-201ENST00000369448 BAG4O95429 457 aaKnown RBP17.78■□□□□ 0.44
FAM46C-201ENST00000369448 MX1P20591 662 aa17.77■□□□□ 0.44
FAM46C-201ENST00000369448 PDRG1Q9NUG6 133 aa17.77■□□□□ 0.44
FAM46C-201ENST00000369448 RLBP1P12271 317 aa17.77■□□□□ 0.44
FAM46C-201ENST00000369448 KIF14Q15058 1648 aa17.77■□□□□ 0.43
FAM46C-201ENST00000369448 F6X3S4 739 aa17.77■□□□□ 0.43
FAM46C-201ENST00000369448 HDAC1Q13547 482 aaPredicted RBP17.77■□□□□ 0.43
FAM46C-201ENST00000369448 PDILTQ8N807 584 aa17.76■□□□□ 0.43
FAM46C-201ENST00000369448 CCDC61Q9Y6R9 512 aa17.76■□□□□ 0.43
FAM46C-201ENST00000369448 GRIN2AQ12879 1464 aa17.76■□□□□ 0.43
FAM46C-201ENST00000369448 PRAG1Q86YV5 1406 aa17.76■□□□□ 0.43
FAM46C-201ENST00000369448 SAFBQ15424 915 aaKnown RBP eCLIP17.76■□□□□ 0.43
FAM46C-201ENST00000369448 BLOC1S2Q6QNY1 142 aa17.76■□□□□ 0.43
FAM46C-201ENST00000369448 NUDT16Q96DE0 195 aaKnown RBP17.76■□□□□ 0.43
FAM46C-201ENST00000369448 NME9Q86XW9 330 aa17.75■□□□□ 0.43
FAM46C-201ENST00000369448 FERMT3Q86UX7 667 aa17.75■□□□□ 0.43
FAM46C-201ENST00000369448 SPINK5Q9NQ38 1064 aaPredicted RBP17.75■□□□□ 0.43
FAM46C-201ENST00000369448 MARCH6O60337 910 aa17.75■□□□□ 0.43
FAM46C-201ENST00000369448 PLEKHO1Q53GL0 409 aaPredicted RBP17.75■□□□□ 0.43
FAM46C-201ENST00000369448 AACSQ86V21 672 aa17.75■□□□□ 0.43
FAM46C-201ENST00000369448 CASTP20810 708 aaKnown RBP17.74■□□□□ 0.43
FAM46C-201ENST00000369448 ANKRD20A12PQ8NF67 263 aa17.74■□□□□ 0.43
FAM46C-201ENST00000369448 IPO7O95373 1038 aaKnown RBP17.74■□□□□ 0.43
FAM46C-201ENST00000369448 NUCB1Q02818 461 aa17.74■□□□□ 0.43
FAM46C-201ENST00000369448 ANKRD1Q15327 319 aa17.74■□□□□ 0.43
FAM46C-201ENST00000369448 OLFM4Q6UX06 510 aa17.74■□□□□ 0.43
FAM46C-201ENST00000369448 RNF123Q5XPI4 1314 aa17.74■□□□□ 0.43
FAM46C-201ENST00000369448 SPATA32Q96LK8 384 aa17.74■□□□□ 0.43
FAM46C-201ENST00000369448 NUP62CLQ9H1M0 184 aa17.74■□□□□ 0.43
FAM46C-201ENST00000369448 STK38Q15208 465 aa17.74■□□□□ 0.43
FAM46C-201ENST00000369448 CCDC112Q8NEF3 446 aa17.74■□□□□ 0.43
FAM46C-201ENST00000369448 GDPD2Q9HCC8 539 aa17.74■□□□□ 0.43
FAM46C-201ENST00000369448 PCMTD1Q96MG8 357 aaPredicted RBP17.73■□□□□ 0.43
FAM46C-201ENST00000369448 ZSCAN31Q96LW9 406 aaPredicted RBP17.73■□□□□ 0.43
FAM46C-201ENST00000369448 ME1P48163 572 aa17.73■□□□□ 0.43
FAM46C-201ENST00000369448 ZNF396Q96N95 335 aaPredicted RBP17.73■□□□□ 0.43
FAM46C-201ENST00000369448 KLHL40Q2TBA0 621 aa17.72■□□□□ 0.43
FAM46C-201ENST00000369448 CCDC83Q8IWF9 413 aa17.72■□□□□ 0.43
FAM46C-201ENST00000369448 DDX54Q8TDD1 881 aaKnown RBP17.72■□□□□ 0.43
FAM46C-201ENST00000369448 RBM27Q9P2N5 1060 aaKnown RBP17.72■□□□□ 0.43
FAM46C-201ENST00000369448 ATP2B1P20020 1258 aa17.72■□□□□ 0.43
FAM46C-201ENST00000369448 FBLN1P23142 703 aa17.72■□□□□ 0.43
FAM46C-201ENST00000369448 EVA1CP58658 441 aa17.72■□□□□ 0.43
FAM46C-201ENST00000369448 TCOF1Q13428 1488 aaKnown RBP17.72■□□□□ 0.43
FAM46C-201ENST00000369448 ERICH2A1L162 156 aa17.71■□□□□ 0.43
FAM46C-201ENST00000369448 ZNF530Q6P9A1 599 aaPredicted RBP17.71■□□□□ 0.43
FAM46C-201ENST00000369448 CAMK4Q16566 473 aa17.71■□□□□ 0.43
FAM46C-201ENST00000369448 RBM42Q9BTD8 480 aaKnown RBP17.71■□□□□ 0.43
FAM46C-201ENST00000369448 LAMC3Q9Y6N6 1575 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms