RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 RSPH6AQ9H0K4 717 aa25.58■■□□□ 1.69
CHTOP-204ENST00000368694 TNS3Q68CZ2 1445 aa25.58■■□□□ 1.68
CHTOP-204ENST00000368694 NEFMP07197 916 aa25.57■■□□□ 1.68
CHTOP-204ENST00000368694 PRKAR2BP31323 418 aa25.57■■□□□ 1.68
CHTOP-204ENST00000368694 HOXC9P31274 260 aa25.57■■□□□ 1.68
CHTOP-204ENST00000368694 GCP02774 474 aa25.56■■□□□ 1.68
CHTOP-204ENST00000368694 GOLGA2Q08379 1002 aa25.56■■□□□ 1.68
CHTOP-204ENST00000368694 USP19O94966 1318 aa25.56■■□□□ 1.68
CHTOP-204ENST00000368694 ZBTB7CA1YPR0 619 aa25.56■■□□□ 1.68
CHTOP-204ENST00000368694 SUPT16HQ9Y5B9 1047 aaKnown RBP25.56■■□□□ 1.68
CHTOP-204ENST00000368694 RTL1A6NKG5 1358 aa25.55■■□□□ 1.68
CHTOP-204ENST00000368694 RGPD1P0DJD0 1748 aa25.55■■□□□ 1.68
CHTOP-204ENST00000368694 WWC1Q8IX03 1113 aa25.54■■□□□ 1.68
CHTOP-204ENST00000368694 PHRF1Q9P1Y6 1649 aaKnown RBP25.53■■□□□ 1.68
CHTOP-204ENST00000368694 SPATA31A3Q5VYP0 1347 aa25.53■■□□□ 1.68
CHTOP-204ENST00000368694 MED1Q15648 1581 aaPredicted RBP25.52■■□□□ 1.68
CHTOP-204ENST00000368694 TMPOP42166 694 aaKnown RBP25.51■■□□□ 1.67
CHTOP-204ENST00000368694 SULT6B1Q6IMI4 303 aa25.51■■□□□ 1.67
CHTOP-204ENST00000368694 ARHGEF10O15013 1369 aa25.51■■□□□ 1.67
CHTOP-204ENST00000368694 AEBP2Q6ZN18 517 aaPredicted RBP25.51■■□□□ 1.67
CHTOP-204ENST00000368694 NHSL1Q5SYE7 1610 aa25.5■■□□□ 1.67
CHTOP-204ENST00000368694 NEFLP07196 543 aa25.5■■□□□ 1.67
CHTOP-204ENST00000368694 CCDC27Q2M243 656 aa25.49■■□□□ 1.67
CHTOP-204ENST00000368694 IP6K1Q92551 441 aa25.49■■□□□ 1.67
CHTOP-204ENST00000368694 AEBP1Q8IUX7 1158 aa25.49■■□□□ 1.67
CHTOP-204ENST00000368694 LTV1Q96GA3 475 aaPredicted RBP25.49■■□□□ 1.67
CHTOP-204ENST00000368694 SOS2Q07890 1332 aaPredicted RBP25.48■■□□□ 1.67
CHTOP-204ENST00000368694 NCBP3Q53F19 620 aaKnown RBP25.48■■□□□ 1.67
CHTOP-204ENST00000368694 ARHGEF25Q86VW2 580 aa25.48■■□□□ 1.67
CHTOP-204ENST00000368694 PHACTR3Q96KR7 559 aa25.47■■□□□ 1.67
CHTOP-204ENST00000368694 PHF23Q9BUL5 403 aaPredicted RBP25.47■■□□□ 1.67
CHTOP-204ENST00000368694 RIPK4P57078 832 aa25.46■■□□□ 1.67
CHTOP-204ENST00000368694 SLFN5Q08AF3 891 aa25.46■■□□□ 1.67
CHTOP-204ENST00000368694 ROBO1Q9Y6N7 1651 aa25.46■■□□□ 1.67
CHTOP-204ENST00000368694 CRYBG1Q9Y4K1 1723 aa25.46■■□□□ 1.67
CHTOP-204ENST00000368694 E9PSI1 815 aa25.46■■□□□ 1.67
CHTOP-204ENST00000368694 DUSP27Q5VZP5 1158 aa25.45■■□□□ 1.66
CHTOP-204ENST00000368694 EYA1Q99502 592 aa25.45■■□□□ 1.66
CHTOP-204ENST00000368694 ZC3H6P61129 1189 aaKnown RBP25.44■■□□□ 1.66
CHTOP-204ENST00000368694 CABLES1Q8TDN4 633 aa25.44■■□□□ 1.66
CHTOP-204ENST00000368694 SPINK5Q9NQ38 1064 aaPredicted RBP25.44■■□□□ 1.66
CHTOP-204ENST00000368694 IGSF1Q8N6C5 1336 aa25.44■■□□□ 1.66
CHTOP-204ENST00000368694 NFE2L2Q16236 605 aa25.43■■□□□ 1.66
CHTOP-204ENST00000368694 WDR63Q8IWG1 891 aa25.43■■□□□ 1.66
CHTOP-204ENST00000368694 DLG5Q8TDM6 1919 aa25.43■■□□□ 1.66
CHTOP-204ENST00000368694 TRIM35Q9UPQ4 493 aa25.42■■□□□ 1.66
CHTOP-204ENST00000368694 RGPD5Q99666 1765 aa25.42■■□□□ 1.66
CHTOP-204ENST00000368694 FKBP8Q14318 412 aa25.41■■□□□ 1.66
CHTOP-204ENST00000368694 KDRP35968 1356 aa25.41■■□□□ 1.66
CHTOP-204ENST00000368694 RCAN3Q9UKA8 241 aa25.4■■□□□ 1.66
CHTOP-204ENST00000368694 RGPD2P0DJD1 1756 aa25.4■■□□□ 1.66
CHTOP-204ENST00000368694 TRMT2AQ8IZ69 625 aaKnown RBP25.4■■□□□ 1.66
CHTOP-204ENST00000368694 ABCA3Q99758 1704 aa25.36■■□□□ 1.65
CHTOP-204ENST00000368694 HAP1P54257 671 aaPredicted RBP25.36■■□□□ 1.65
CHTOP-204ENST00000368694 AXIN2Q9Y2T1 843 aa25.36■■□□□ 1.65
CHTOP-204ENST00000368694 IRX6P78412 446 aaPredicted RBP25.35■■□□□ 1.65
CHTOP-204ENST00000368694 USHBP1Q8N6Y0 703 aa25.35■■□□□ 1.65
CHTOP-204ENST00000368694 ANKRD24Q8TF21 1146 aa25.35■■□□□ 1.65
CHTOP-204ENST00000368694 LMOD3Q0VAK6 560 aa25.34■■□□□ 1.65
CHTOP-204ENST00000368694 AHDC1Q5TGY3 1603 aaPredicted RBP25.34■■□□□ 1.65
CHTOP-204ENST00000368694 KIAA0232Q92628 1395 aa25.34■■□□□ 1.65
CHTOP-204ENST00000368694 MYH16Q9H6N6 1097 aa25.33■■□□□ 1.65
CHTOP-204ENST00000368694 COL18A1P39060 1754 aa25.33■■□□□ 1.65
CHTOP-204ENST00000368694 NBPF6Q5VWK0 638 aa25.33■■□□□ 1.65
CHTOP-204ENST00000368694 LRRC59Q96AG4 307 aaKnown RBP25.33■■□□□ 1.65
CHTOP-204ENST00000368694 NBPF4Q96M43 638 aa25.33■■□□□ 1.65
CHTOP-204ENST00000368694 CHRNA2Q15822 529 aa25.32■■□□□ 1.64
CHTOP-204ENST00000368694 CPDO75976 1380 aa25.31■■□□□ 1.64
CHTOP-204ENST00000368694 ABCC6O95255 1503 aa25.31■■□□□ 1.64
CHTOP-204ENST00000368694 TOM1O60784 492 aa25.3■■□□□ 1.64
CHTOP-204ENST00000368694 ERBB3P21860 1342 aa25.3■■□□□ 1.64
CHTOP-204ENST00000368694 IL16Q14005 1332 aa25.3■■□□□ 1.64
CHTOP-204ENST00000368694 RNF123Q5XPI4 1314 aa25.29■■□□□ 1.64
CHTOP-204ENST00000368694 CALD1Q05682 793 aaKnown RBP25.28■■□□□ 1.64
CHTOP-204ENST00000368694 THUMPD2Q9BTF0 503 aaKnown RBP25.28■■□□□ 1.64
CHTOP-204ENST00000368694 CAMTA1Q9Y6Y1 1673 aa25.28■■□□□ 1.64
CHTOP-204ENST00000368694 PHLPP1O60346 1717 aa25.28■■□□□ 1.64
CHTOP-204ENST00000368694 MTHFSDQ2M296 383 aaKnown RBP25.28■■□□□ 1.64
CHTOP-204ENST00000368694 FAM83GA6ND36 823 aa25.27■■□□□ 1.64
CHTOP-204ENST00000368694 PIP4K2BP78356 416 aa25.27■■□□□ 1.64
CHTOP-204ENST00000368694 PRDM11Q9NQV5 511 aa25.27■■□□□ 1.64
CHTOP-204ENST00000368694 GAS2L2Q8NHY3 880 aa25.27■■□□□ 1.64
CHTOP-204ENST00000368694 TSR2Q969E8 191 aaKnown RBP25.27■■□□□ 1.64
CHTOP-204ENST00000368694 RRP1P56182 461 aaKnown RBP25.26■■□□□ 1.63
CHTOP-204ENST00000368694 LAS1LQ9Y4W2 734 aaKnown RBP25.26■■□□□ 1.63
CHTOP-204ENST00000368694 FANCIQ9NVI1 1328 aa25.26■■□□□ 1.63
CHTOP-204ENST00000368694 FAM208AQ9UK61 1670 aaKnown RBP25.26■■□□□ 1.63
CHTOP-204ENST00000368694 DCTN1Q14203 1278 aa25.25■■□□□ 1.63
CHTOP-204ENST00000368694 CSB-PGBD3P0DP91 1061 aa25.24■■□□□ 1.63
CHTOP-204ENST00000368694 NCAPD2Q15021 1401 aa25.23■■□□□ 1.63
CHTOP-204ENST00000368694 UBAP1LF5GYI3 381 aa25.23■■□□□ 1.63
CHTOP-204ENST00000368694 NLRP2Q9NX02 1062 aa25.22■■□□□ 1.63
CHTOP-204ENST00000368694 LMO7Q8WWI1 1683 aa25.22■■□□□ 1.63
CHTOP-204ENST00000368694 RTF1Q92541 710 aaKnown RBP25.22■■□□□ 1.63
CHTOP-204ENST00000368694 MCM10Q7L590 875 aa25.21■■□□□ 1.63
CHTOP-204ENST00000368694 COL16A1Q07092 1604 aaPredicted RBP25.21■■□□□ 1.63
CHTOP-204ENST00000368694 COL22A1Q8NFW1 1626 aaPredicted RBP25.2■■□□□ 1.62
CHTOP-204ENST00000368694 GNAI1P63096 354 aa25.2■■□□□ 1.62
CHTOP-204ENST00000368694 IFT57Q9NWB7 429 aa25.2■■□□□ 1.62
CHTOP-204ENST00000368694 EXOSC9Q06265 439 aaKnown RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms