RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 CAMTA1Q9Y6Y1 1673 aa18.85■□□□□ 0.61
TPM3-211ENST00000368531 AATKQ6ZMQ8 1374 aa18.85■□□□□ 0.61
TPM3-211ENST00000368531 FNBP4Q8N3X1 1017 aaPredicted RBP18.85■□□□□ 0.61
TPM3-211ENST00000368531 POLKQ9UBT6 870 aa18.85■□□□□ 0.61
TPM3-211ENST00000368531 PEAK1Q9H792 1746 aa18.85■□□□□ 0.61
TPM3-211ENST00000368531 NWD2Q9ULI1 1742 aa18.85■□□□□ 0.61
TPM3-211ENST00000368531 LMO7Q8WWI1 1683 aa18.85■□□□□ 0.61
TPM3-211ENST00000368531 LTV1Q96GA3 475 aaPredicted RBP18.84■□□□□ 0.61
TPM3-211ENST00000368531 SLIT2O94813 1529 aa18.84■□□□□ 0.61
TPM3-211ENST00000368531 NRAPQ86VF7 1730 aa18.83■□□□□ 0.61
TPM3-211ENST00000368531 HOXC9P31274 260 aa18.83■□□□□ 0.6
TPM3-211ENST00000368531 IP6K1Q92551 441 aa18.83■□□□□ 0.6
TPM3-211ENST00000368531 CCDC9Q9Y3X0 531 aaKnown RBP18.83■□□□□ 0.6
TPM3-211ENST00000368531 UNC5CLQ8IV45 518 aa18.82■□□□□ 0.6
TPM3-211ENST00000368531 BCL9LQ86UU0 1499 aa18.82■□□□□ 0.6
TPM3-211ENST00000368531 CSB-PGBD3P0DP91 1061 aa18.81■□□□□ 0.6
TPM3-211ENST00000368531 MTHFSP49914 203 aa18.81■□□□□ 0.6
TPM3-211ENST00000368531 HSP90AB2PQ58FF8 381 aa18.81■□□□□ 0.6
TPM3-211ENST00000368531 RGS17Q9UGC6 210 aaPredicted RBP18.81■□□□□ 0.6
TPM3-211ENST00000368531 PPP2R1AP30153 589 aa18.8■□□□□ 0.6
TPM3-211ENST00000368531 ZNF772Q68DY9 489 aaPredicted RBP18.8■□□□□ 0.6
TPM3-211ENST00000368531 QTRT2Q9H974 415 aaKnown RBP18.8■□□□□ 0.6
TPM3-211ENST00000368531 FLT4P35916 1363 aa18.8■□□□□ 0.6
TPM3-211ENST00000368531 PARD3Q8TEW0 1356 aa18.8■□□□□ 0.6
TPM3-211ENST00000368531 COL5A2P05997 1499 aaPredicted RBP18.79■□□□□ 0.6
TPM3-211ENST00000368531 RALBP1Q15311 655 aa18.79■□□□□ 0.6
TPM3-211ENST00000368531 LARP1Q6PKG0 1096 aaKnown RBP18.79■□□□□ 0.6
TPM3-211ENST00000368531 ANKRD24Q8TF21 1146 aa18.79■□□□□ 0.6
TPM3-211ENST00000368531 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.79■□□□□ 0.6
TPM3-211ENST00000368531 RGPD2P0DJD1 1756 aa18.78■□□□□ 0.6
TPM3-211ENST00000368531 USP35Q9P2H5 1018 aa18.78■□□□□ 0.6
TPM3-211ENST00000368531 ABCC6O95255 1503 aa18.78■□□□□ 0.6
TPM3-211ENST00000368531 RTL1A6NKG5 1358 aa18.78■□□□□ 0.6
TPM3-211ENST00000368531 BLMP54132 1417 aaPredicted RBP18.77■□□□□ 0.6
TPM3-211ENST00000368531 ANP32CO43423 234 aa18.77■□□□□ 0.6
TPM3-211ENST00000368531 TOM1L2Q6ZVM7 507 aa18.77■□□□□ 0.6
TPM3-211ENST00000368531 PRKRIP1Q9H875 184 aaPredicted RBP18.77■□□□□ 0.6
TPM3-211ENST00000368531 TRPC5Q9UL62 973 aaPredicted RBP18.77■□□□□ 0.6
TPM3-211ENST00000368531 POTEAQ6S8J7 498 aa18.76■□□□□ 0.59
TPM3-211ENST00000368531 INSRP06213 1382 aa18.76■□□□□ 0.59
TPM3-211ENST00000368531 KIF24Q5T7B8 1368 aa18.76■□□□□ 0.59
TPM3-211ENST00000368531 VPS72Q15906 364 aa18.75■□□□□ 0.59
TPM3-211ENST00000368531 NLRP2Q9NX02 1062 aa18.75■□□□□ 0.59
TPM3-211ENST00000368531 ERBB3P21860 1342 aa18.74■□□□□ 0.59
TPM3-211ENST00000368531 WDR17Q8IZU2 1322 aa18.74■□□□□ 0.59
TPM3-211ENST00000368531 ATRNO75882 1429 aa18.74■□□□□ 0.59
TPM3-211ENST00000368531 SMG6Q86US8 1419 aaKnown RBP18.74■□□□□ 0.59
TPM3-211ENST00000368531 CDK12Q9NYV4 1490 aaPredicted RBP18.74■□□□□ 0.59
TPM3-211ENST00000368531 GJD4Q96KN9 370 aaPredicted RBP18.73■□□□□ 0.59
TPM3-211ENST00000368531 MYBBP1AQ9BQG0 1328 aaKnown RBP18.73■□□□□ 0.59
TPM3-211ENST00000368531 EIF4A2Q14240 407 aaKnown RBP18.72■□□□□ 0.59
TPM3-211ENST00000368531 DIEXFQ68CQ4 756 aaKnown RBP18.72■□□□□ 0.59
TPM3-211ENST00000368531 CFAP53Q96M91 514 aa18.72■□□□□ 0.59
TPM3-211ENST00000368531 CRB1P82279 1406 aa18.72■□□□□ 0.59
TPM3-211ENST00000368531 SPATA31A5Q5VU36 1347 aa18.72■□□□□ 0.59
TPM3-211ENST00000368531 SPATA31A7Q8IWB4 1347 aa18.72■□□□□ 0.59
TPM3-211ENST00000368531 POTEDQ86YR6 584 aa18.71■□□□□ 0.59
TPM3-211ENST00000368531 USHBP1Q8N6Y0 703 aa18.71■□□□□ 0.59
TPM3-211ENST00000368531 SPATA31A1Q5TZJ5 1347 aa18.71■□□□□ 0.59
TPM3-211ENST00000368531 FAM208AQ9UK61 1670 aaKnown RBP18.7■□□□□ 0.58
TPM3-211ENST00000368531 GLI3P10071 1580 aa18.7■□□□□ 0.58
TPM3-211ENST00000368531 A0A0G2JS52 829 aa18.69■□□□□ 0.58
TPM3-211ENST00000368531 DIAPH1O60610 1272 aaKnown RBP18.69■□□□□ 0.58
TPM3-211ENST00000368531 RXRBP28702 533 aa18.69■□□□□ 0.58
TPM3-211ENST00000368531 RBM6P78332 1123 aaKnown RBP18.69■□□□□ 0.58
TPM3-211ENST00000368531 MYT1Q01538 1121 aa18.69■□□□□ 0.58
TPM3-211ENST00000368531 NBPF6Q5VWK0 638 aa18.69■□□□□ 0.58
TPM3-211ENST00000368531 NBPF4Q96M43 638 aa18.69■□□□□ 0.58
TPM3-211ENST00000368531 CARD10Q9BWT7 1032 aa18.69■□□□□ 0.58
TPM3-211ENST00000368531 FAM98CQ17RN3 349 aaKnown RBP18.68■□□□□ 0.58
TPM3-211ENST00000368531 TCP11L2Q8N4U5 519 aa18.68■□□□□ 0.58
TPM3-211ENST00000368531 IL13P35225 146 aa18.67■□□□□ 0.58
TPM3-211ENST00000368531 EYA1Q99502 592 aa18.67■□□□□ 0.58
TPM3-211ENST00000368531 COL3A1P02461 1466 aaPredicted RBP18.66■□□□□ 0.58
TPM3-211ENST00000368531 U2SURPO15042 1029 aaKnown RBP18.66■□□□□ 0.58
TPM3-211ENST00000368531 WNK3Q9BYP7 1800 aa18.64■□□□□ 0.57
TPM3-211ENST00000368531 CCDC184Q52MB2 194 aa18.63■□□□□ 0.57
TPM3-211ENST00000368531 THRAP3Q9Y2W1 955 aaKnown RBP18.63■□□□□ 0.57
TPM3-211ENST00000368531 HMOX1P09601 288 aa18.62■□□□□ 0.57
TPM3-211ENST00000368531 BARGINQ6ZT62 677 aa18.62■□□□□ 0.57
TPM3-211ENST00000368531 NUDCQ9Y266 331 aa18.62■□□□□ 0.57
TPM3-211ENST00000368531 RGPD1P0DJD0 1748 aa18.62■□□□□ 0.57
TPM3-211ENST00000368531 SULT6B1Q6IMI4 303 aa18.61■□□□□ 0.57
TPM3-211ENST00000368531 AEBP1Q8IUX7 1158 aa18.61■□□□□ 0.57
TPM3-211ENST00000368531 SEPT12Q8IYM1 358 aa18.61■□□□□ 0.57
TPM3-211ENST00000368531 IGSF1Q8N6C5 1336 aa18.6■□□□□ 0.57
TPM3-211ENST00000368531 IL2RBP14784 551 aa18.6■□□□□ 0.57
TPM3-211ENST00000368531 RAPGEF4Q8WZA2 1011 aa18.6■□□□□ 0.57
TPM3-211ENST00000368531 BRWD3Q6RI45 1802 aa18.6■□□□□ 0.57
TPM3-211ENST00000368531 U2AF1L5P0DN76 240 aaPredicted RBP18.59■□□□□ 0.57
TPM3-211ENST00000368531 U2AF1Q01081 240 aaKnown RBP eCLIP18.59■□□□□ 0.577e-10■■□□□ 13
TPM3-211ENST00000368531 THSD7AQ9UPZ6 1657 aa18.58■□□□□ 0.57
TPM3-211ENST00000368531 TATP17735 454 aaPredicted RBP18.58■□□□□ 0.56
TPM3-211ENST00000368531 MRS2Q9HD23 443 aa18.58■□□□□ 0.56
TPM3-211ENST00000368531 RGS12O14924 1447 aa18.57■□□□□ 0.56
TPM3-211ENST00000368531 PARP4Q9UKK3 1724 aaKnown RBP18.57■□□□□ 0.56
TPM3-211ENST00000368531 ONECUT3O60422 494 aaPredicted RBP18.57■□□□□ 0.56
TPM3-211ENST00000368531 MIER1Q8N108 512 aa18.57■□□□□ 0.56
TPM3-211ENST00000368531 MEGF6O75095 1541 aa18.57■□□□□ 0.56
TPM3-211ENST00000368531 DISP2A7MBM2 1401 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms