RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 POLR3AO14802 1390 aaPredicted RBP14.41□□□□□ -0.1
NUP43-203ENST00000367404 ITSN1Q15811 1721 aa14.41□□□□□ -0.1
NUP43-203ENST00000367404 TOPAZ1Q8N9V7 1692 aa14.4□□□□□ -0.1
NUP43-203ENST00000367404 EN1Q05925 392 aaPredicted RBP14.4□□□□□ -0.1
NUP43-203ENST00000367404 FAM182BQ5T319 152 aa14.4□□□□□ -0.1
NUP43-203ENST00000367404 LHX8Q68G74 356 aa14.39□□□□□ -0.11
NUP43-203ENST00000367404 NUDT16Q96DE0 195 aaKnown RBP14.39□□□□□ -0.11
NUP43-203ENST00000367404 KDM2AQ9Y2K7 1162 aa14.39□□□□□ -0.11
NUP43-203ENST00000367404 NRKQ7Z2Y5 1582 aa14.39□□□□□ -0.11
NUP43-203ENST00000367404 PARD3Q8TEW0 1356 aa14.37□□□□□ -0.11
NUP43-203ENST00000367404 SSH2Q76I76 1423 aa14.37□□□□□ -0.11
NUP43-203ENST00000367404 CPDO75976 1380 aa14.36□□□□□ -0.11
NUP43-203ENST00000367404 CHRNA2Q15822 529 aa14.36□□□□□ -0.11
NUP43-203ENST00000367404 CAMKK2Q96RR4 588 aa14.36□□□□□ -0.11
NUP43-203ENST00000367404 USP19O94966 1318 aa14.36□□□□□ -0.11
NUP43-203ENST00000367404 LMO7Q8WWI1 1683 aa14.36□□□□□ -0.11
NUP43-203ENST00000367404 PLEKHG3A1L390 1219 aa14.35□□□□□ -0.11
NUP43-203ENST00000367404 MAP3K13O43283 966 aa14.35□□□□□ -0.11
NUP43-203ENST00000367404 R3HDM1Q15032 1099 aaKnown RBP14.35□□□□□ -0.11
NUP43-203ENST00000367404 EZH2Q15910 746 aaKnown RBP14.35□□□□□ -0.11
NUP43-203ENST00000367404 FAM196AQ6ZSG2 479 aa14.35□□□□□ -0.11
NUP43-203ENST00000367404 BARGINQ6ZT62 677 aa14.35□□□□□ -0.11
NUP43-203ENST00000367404 CDK19Q9BWU1 502 aa14.35□□□□□ -0.11
NUP43-203ENST00000367404 ACEP12821 1306 aa14.35□□□□□ -0.11
NUP43-203ENST00000367404 CAMTA1Q9Y6Y1 1673 aa14.34□□□□□ -0.11
NUP43-203ENST00000367404 KIAA1210Q9ULL0 1709 aa14.33□□□□□ -0.12
NUP43-203ENST00000367404 ZC3H6P61129 1189 aaKnown RBP14.33□□□□□ -0.12
NUP43-203ENST00000367404 NBPF8Q3BBV2 869 aa14.33□□□□□ -0.12
NUP43-203ENST00000367404 STRN4Q9NRL3 753 aa14.33□□□□□ -0.12
NUP43-203ENST00000367404 TRIM37O94972 964 aa14.32□□□□□ -0.12
NUP43-203ENST00000367404 PELP1Q8IZL8 1130 aaKnown RBP14.32□□□□□ -0.12
NUP43-203ENST00000367404 FAM212AQ96EL1 285 aa14.32□□□□□ -0.12
NUP43-203ENST00000367404 RREB1Q92766 1687 aa14.32□□□□□ -0.12
NUP43-203ENST00000367404 NUTM2GQ5VZR2 741 aa14.31□□□□□ -0.12
NUP43-203ENST00000367404 ASTLQ6HA08 431 aaPredicted RBP14.31□□□□□ -0.12
NUP43-203ENST00000367404 LARP1Q6PKG0 1096 aaKnown RBP14.3□□□□□ -0.12
NUP43-203ENST00000367404 BRD4O60885 1362 aaPredicted RBP14.3□□□□□ -0.12
NUP43-203ENST00000367404 COL5A2P05997 1499 aaPredicted RBP14.3□□□□□ -0.12
NUP43-203ENST00000367404 ATMINO43313 823 aaPredicted RBP14.29□□□□□ -0.12
NUP43-203ENST00000367404 APBA3O96018 575 aa14.29□□□□□ -0.12
NUP43-203ENST00000367404 TCP11L2Q8N4U5 519 aa14.29□□□□□ -0.12
NUP43-203ENST00000367404 ABTB2Q8N961 1025 aa14.29□□□□□ -0.12
NUP43-203ENST00000367404 USP35Q9P2H5 1018 aa14.29□□□□□ -0.12
NUP43-203ENST00000367404 TRPC6Q9Y210 931 aa14.29□□□□□ -0.12
NUP43-203ENST00000367404 THRAP3Q9Y2W1 955 aaKnown RBP14.29□□□□□ -0.12
NUP43-203ENST00000367404 PPIP5K1Q6PFW1 1433 aa14.29□□□□□ -0.12
NUP43-203ENST00000367404 NUP188Q5SRE5 1749 aa14.29□□□□□ -0.12
NUP43-203ENST00000367404 KLHL34Q8N239 644 aa14.28□□□□□ -0.12
NUP43-203ENST00000367404 PARP4Q9UKK3 1724 aaKnown RBP14.27□□□□□ -0.12
NUP43-203ENST00000367404 SLIT3O75094 1523 aa14.27□□□□□ -0.12
NUP43-203ENST00000367404 GCP02774 474 aa14.27□□□□□ -0.13
NUP43-203ENST00000367404 EVA1CP58658 441 aa14.27□□□□□ -0.13
NUP43-203ENST00000367404 PDE3BQ13370 1112 aa14.27□□□□□ -0.13
NUP43-203ENST00000367404 NBPF1Q3BBV0 1214 aa14.27□□□□□ -0.13
NUP43-203ENST00000367404 CRB1P82279 1406 aa14.26□□□□□ -0.13
NUP43-203ENST00000367404 NLRP13Q86W25 1043 aa14.26□□□□□ -0.13
NUP43-203ENST00000367404 USP6P35125 1406 aa14.25□□□□□ -0.13
NUP43-203ENST00000367404 CENPJQ9HC77 1338 aaPredicted RBP14.25□□□□□ -0.13
NUP43-203ENST00000367404 PEAK1Q9H792 1746 aa14.25□□□□□ -0.13
NUP43-203ENST00000367404 DCAF8Q5TAQ9 597 aa14.25□□□□□ -0.13
NUP43-203ENST00000367404 OVOS2A0A0G2JMS6 1433 aa14.24□□□□□ -0.13
NUP43-203ENST00000367404 OVOS2A0A0J9YW53 1432 aa14.24□□□□□ -0.13
NUP43-203ENST00000367404 OVOS2Q6IE36 1432 aa14.24□□□□□ -0.13
NUP43-203ENST00000367404 AATKQ6ZMQ8 1374 aa14.24□□□□□ -0.13
NUP43-203ENST00000367404 C11orf95C9JLR9 678 aaPredicted RBP14.24□□□□□ -0.13
NUP43-203ENST00000367404 SGIP1Q9BQI5 828 aa14.24□□□□□ -0.13
NUP43-203ENST00000367404 LRRC37A3O60309 1634 aa14.23□□□□□ -0.13
NUP43-203ENST00000367404 SRPK2P78362 688 aaKnown RBP14.23□□□□□ -0.13
NUP43-203ENST00000367404 CABP2Q9NPB3 220 aa14.23□□□□□ -0.13
NUP43-203ENST00000367404 RGPD3A6NKT7 1758 aaPredicted RBP14.22□□□□□ -0.13
NUP43-203ENST00000367404 RGPD4Q7Z3J3 1758 aa14.22□□□□□ -0.13
NUP43-203ENST00000367404 ATN1P54259 1190 aaPredicted RBP14.22□□□□□ -0.13
NUP43-203ENST00000367404 NBPF14Q5TI25 921 aa14.22□□□□□ -0.13
NUP43-203ENST00000367404 BMP2KQ9NSY1 1161 aaPredicted RBP14.22□□□□□ -0.13
NUP43-203ENST00000367404 PCDHB13Q9Y5F0 798 aa14.22□□□□□ -0.13
NUP43-203ENST00000367404 QRICH2Q9H0J4 1663 aa14.21□□□□□ -0.13
NUP43-203ENST00000367404 IFNLR1Q8IU57 520 aaPredicted RBP14.21□□□□□ -0.13
NUP43-203ENST00000367404 BCL9O00512 1426 aa14.21□□□□□ -0.13
NUP43-203ENST00000367404 PIK3C2AO00443 1686 aa14.2□□□□□ -0.14
NUP43-203ENST00000367404 TIE1P35590 1138 aa14.2□□□□□ -0.14
NUP43-203ENST00000367404 CPSF1Q10570 1443 aaKnown RBP14.2□□□□□ -0.14
NUP43-203ENST00000367404 PLSCR1O15162 318 aa14.19□□□□□ -0.14
NUP43-203ENST00000367404 CABP1Q9NZU7 370 aa14.19□□□□□ -0.14
NUP43-203ENST00000367404 NINLQ9Y2I6 1382 aa14.19□□□□□ -0.14
NUP43-203ENST00000367404 COL18A1P39060 1754 aa14.19□□□□□ -0.14
NUP43-203ENST00000367404 WDR17Q8IZU2 1322 aa14.18□□□□□ -0.14
NUP43-203ENST00000367404 NLRP6P59044 892 aa14.18□□□□□ -0.14
NUP43-203ENST00000367404 POTEB2H3BUK9 544 aa14.17□□□□□ -0.14
NUP43-203ENST00000367404 KCNQ2O43526 872 aa14.17□□□□□ -0.14
NUP43-203ENST00000367404 DDB1Q16531 1140 aa14.17□□□□□ -0.14
NUP43-203ENST00000367404 IFNL1Q8IU54 200 aa14.17□□□□□ -0.14
NUP43-203ENST00000367404 SPON1Q9HCB6 807 aa14.17□□□□□ -0.14
NUP43-203ENST00000367404 TRPM1Q7Z4N2 1603 aa14.16□□□□□ -0.14
NUP43-203ENST00000367404 WNK3Q9BYP7 1800 aa14.16□□□□□ -0.14
NUP43-203ENST00000367404 PYGBP11216 843 aa14.16□□□□□ -0.14
NUP43-203ENST00000367404 ARHGEF25Q86VW2 580 aa14.16□□□□□ -0.14
NUP43-203ENST00000367404 SLC39A7Q92504 469 aa14.16□□□□□ -0.14
NUP43-203ENST00000367404 ANO8Q9HCE9 1232 aaPredicted RBP14.16□□□□□ -0.14
NUP43-203ENST00000367404 AXIN2Q9Y2T1 843 aa14.16□□□□□ -0.14
NUP43-203ENST00000367404 ABCC6O95255 1503 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms