RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 ZNF692Q9BU19 519 aaPredicted RBP10.12□□□□□ -0.79
CD46-208ENST00000367042 PIK3C2BO00750 1634 aa10.12□□□□□ -0.79
CD46-208ENST00000367042 CASC1Q6TDU7 716 aa10.12□□□□□ -0.79
CD46-208ENST00000367042 ZMYM3Q14202 1370 aa10.11□□□□□ -0.79
CD46-208ENST00000367042 FAM83GA6ND36 823 aa10.11□□□□□ -0.79
CD46-208ENST00000367042 C16orf71Q8IYS4 520 aaPredicted RBP10.11□□□□□ -0.79
CD46-208ENST00000367042 CDK19Q9BWU1 502 aa10.11□□□□□ -0.79
CD46-208ENST00000367042 PPLO60437 1756 aa10.11□□□□□ -0.79
CD46-208ENST00000367042 IDI1Q13907 227 aa10.11□□□□□ -0.79
CD46-208ENST00000367042 ALDH1L2Q3SY69 923 aa10.11□□□□□ -0.79
CD46-208ENST00000367042 ZBTB7BO15156 539 aaPredicted RBP10.1□□□□□ -0.79
CD46-208ENST00000367042 SMARCA5O60264 1052 aaPredicted RBP10.1□□□□□ -0.79
CD46-208ENST00000367042 PRPF40AO75400 957 aaKnown RBP10.1□□□□□ -0.79
CD46-208ENST00000367042 PTMSP20962 102 aa10.1□□□□□ -0.79
CD46-208ENST00000367042 SLC4A10Q6U841 1118 aa10.1□□□□□ -0.79
CD46-208ENST00000367042 EMILIN1Q9Y6C2 1016 aa10.1□□□□□ -0.79
CD46-208ENST00000367042 ZC3H13Q5T200 1668 aaKnown RBP10.1□□□□□ -0.79
CD46-208ENST00000367042 BAG4O95429 457 aaKnown RBP10.1□□□□□ -0.79
CD46-208ENST00000367042 GNAI1P63096 354 aa10.1□□□□□ -0.79
CD46-208ENST00000367042 KIAA1211Q6ZU35 1233 aa10.1□□□□□ -0.79
CD46-208ENST00000367042 NSD2O96028 1365 aa10.1□□□□□ -0.79
CD46-208ENST00000367042 FCHSD2O94868 740 aa10.1□□□□□ -0.79
CD46-208ENST00000367042 RBM10P98175 930 aaKnown RBP10.1□□□□□ -0.79
CD46-208ENST00000367042 ISY1Q9ULR0 285 aaKnown RBP10.1□□□□□ -0.79
CD46-208ENST00000367042 MBIPQ9NS73 344 aa10.09□□□□□ -0.79
CD46-208ENST00000367042 VAMP4O75379 141 aa10.09□□□□□ -0.79
CD46-208ENST00000367042 RRS1Q15050 365 aaKnown RBP10.09□□□□□ -0.79
CD46-208ENST00000367042 RNF214Q8ND24 703 aa10.09□□□□□ -0.79
CD46-208ENST00000367042 IL16Q14005 1332 aa10.09□□□□□ -0.79
CD46-208ENST00000367042 TSPOAP1O95153 1857 aa10.09□□□□□ -0.79
CD46-208ENST00000367042 ST18O60284 1047 aa10.09□□□□□ -0.79
CD46-208ENST00000367042 PTMAP06454 111 aaKnown RBP10.09□□□□□ -0.79
CD46-208ENST00000367042 CCDC173Q0VFZ6 552 aa10.09□□□□□ -0.79
CD46-208ENST00000367042 NFE2L2Q16236 605 aa10.09□□□□□ -0.79
CD46-208ENST00000367042 WAPLQ7Z5K2 1190 aa10.09□□□□□ -0.79
CD46-208ENST00000367042 RPGRIP1LQ68CZ1 1315 aa10.08□□□□□ -0.8
CD46-208ENST00000367042 ARHGAP31Q2M1Z3 1444 aa10.08□□□□□ -0.8
CD46-208ENST00000367042 SHPRHQ149N8 1683 aa10.08□□□□□ -0.8
CD46-208ENST00000367042 NUTM2FA1L443 756 aa10.08□□□□□ -0.8
CD46-208ENST00000367042 MRPL50Q8N5N7 158 aaKnown RBP10.08□□□□□ -0.8
CD46-208ENST00000367042 C8orf58Q8NAV2 365 aa10.08□□□□□ -0.8
CD46-208ENST00000367042 CHAMP1Q96JM3 812 aa10.08□□□□□ -0.8
CD46-208ENST00000367042 PKP1Q13835 747 aa10.08□□□□□ -0.8
CD46-208ENST00000367042 OTUD7AQ8TE49 926 aaPredicted RBP10.08□□□□□ -0.8
CD46-208ENST00000367042 KIF2CQ99661 725 aa10.08□□□□□ -0.8
CD46-208ENST00000367042 API5Q9BZZ5 524 aaKnown RBP10.08□□□□□ -0.8
CD46-208ENST00000367042 FAM13BQ9NYF5 915 aa10.08□□□□□ -0.8
CD46-208ENST00000367042 RBM27Q9P2N5 1060 aaKnown RBP10.08□□□□□ -0.8
CD46-208ENST00000367042 R3HCC1Q9Y3T6 440 aaKnown RBP10.08□□□□□ -0.8
CD46-208ENST00000367042 PPIP5K1Q6PFW1 1433 aa10.08□□□□□ -0.8
CD46-208ENST00000367042 RRP9O43818 475 aaKnown RBP10.07□□□□□ -0.8
CD46-208ENST00000367042 RABEP1Q15276 862 aa10.07□□□□□ -0.8
CD46-208ENST00000367042 INTS3Q68E01 1043 aaKnown RBP10.07□□□□□ -0.8
CD46-208ENST00000367042 MYO3AQ8NEV4 1616 aa10.07□□□□□ -0.8
CD46-208ENST00000367042 KIF13AQ9H1H9 1805 aa10.07□□□□□ -0.8
CD46-208ENST00000367042 FAM69CQ0P6D2 419 aa10.07□□□□□ -0.8
CD46-208ENST00000367042 KRT24Q2M2I5 525 aa10.07□□□□□ -0.8
CD46-208ENST00000367042 SIRT2Q8IXJ6 389 aa10.07□□□□□ -0.8
CD46-208ENST00000367042 MPNDQ8N594 471 aa10.07□□□□□ -0.8
CD46-208ENST00000367042 ZRANB1Q9UGI0 708 aa10.07□□□□□ -0.8
CD46-208ENST00000367042 QRICH2Q9H0J4 1663 aa10.07□□□□□ -0.8
CD46-208ENST00000367042 GSPT1P15170 499 aaKnown RBP10.07□□□□□ -0.8
CD46-208ENST00000367042 NUCB2P80303 420 aa10.07□□□□□ -0.8
CD46-208ENST00000367042 ZGPATQ8N5A5 531 aaKnown RBP10.07□□□□□ -0.8
CD46-208ENST00000367042 SETBP1Q9Y6X0 1596 aa10.06□□□□□ -0.8
CD46-208ENST00000367042 KLHL40Q2TBA0 621 aa10.06□□□□□ -0.8
CD46-208ENST00000367042 ZSCAN30Q86W11 494 aa10.06□□□□□ -0.8
CD46-208ENST00000367042 POLKQ9UBT6 870 aa10.06□□□□□ -0.8
CD46-208ENST00000367042 DNTTIP2Q5QJE6 756 aaKnown RBP10.06□□□□□ -0.8
CD46-208ENST00000367042 NME9Q86XW9 330 aa10.06□□□□□ -0.8
CD46-208ENST00000367042 REREQ9P2R6 1566 aa10.06□□□□□ -0.8
CD46-208ENST00000367042 MLECQ14165 292 aa10.05□□□□□ -0.8
CD46-208ENST00000367042 TSHZ3Q63HK5 1081 aa10.05□□□□□ -0.8
CD46-208ENST00000367042 PKNOX2Q96KN3 472 aa10.05□□□□□ -0.8
CD46-208ENST00000367042 ADGRB1O14514 1584 aa10.05□□□□□ -0.8
CD46-208ENST00000367042 TRIM6-TRIM34B2RNG4 842 aa10.05□□□□□ -0.8
CD46-208ENST00000367042 PLCB2Q00722 1185 aa10.05□□□□□ -0.8
CD46-208ENST00000367042 PLEKHM2Q8IWE5 1019 aa10.05□□□□□ -0.8
CD46-208ENST00000367042 ZMYND15Q9H091 742 aa10.05□□□□□ -0.8
CD46-208ENST00000367042 SYCE3A1L190 88 aa10.05□□□□□ -0.8
CD46-208ENST00000367042 XPCQ01831 940 aaPredicted RBP10.05□□□□□ -0.8
CD46-208ENST00000367042 ZSCAN23Q3MJ62 389 aa10.05□□□□□ -0.8
CD46-208ENST00000367042 RILPL2Q969X0 211 aa10.05□□□□□ -0.8
CD46-208ENST00000367042 PREX1Q8TCU6 1659 aa10.04□□□□□ -0.8
CD46-208ENST00000367042 DDIT3P35638 169 aa10.04□□□□□ -0.8
CD46-208ENST00000367042 NEK4P51957 841 aa10.04□□□□□ -0.8
CD46-208ENST00000367042 NECTIN2Q92692 538 aa10.04□□□□□ -0.8
CD46-208ENST00000367042 NEXMIFQ5QGS0 1516 aa10.04□□□□□ -0.8
CD46-208ENST00000367042 LMOD3Q0VAK6 560 aa10.04□□□□□ -0.8
CD46-208ENST00000367042 TTC22Q5TAA0 569 aa10.04□□□□□ -0.8
CD46-208ENST00000367042 COG3Q96JB2 828 aa10.04□□□□□ -0.8
CD46-208ENST00000367042 MIS18AQ9NYP9 233 aa10.04□□□□□ -0.8
CD46-208ENST00000367042 SDSP20132 328 aa10.04□□□□□ -0.8
CD46-208ENST00000367042 PRIM1P49642 420 aaKnown RBP10.04□□□□□ -0.8
CD46-208ENST00000367042 FBXO31Q5XUX0 539 aaPredicted RBP10.04□□□□□ -0.8
CD46-208ENST00000367042 MCM10Q7L590 875 aa10.04□□□□□ -0.8
CD46-208ENST00000367042 ZNF428Q96B54 188 aa10.04□□□□□ -0.8
CD46-208ENST00000367042 IFT57Q9NWB7 429 aa10.04□□□□□ -0.8
CD46-208ENST00000367042 MYO5BQ9ULV0 1848 aa10.03□□□□□ -0.8
CD46-208ENST00000367042 REC8O95072 547 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms