RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 LNPKQ9C0E8 428 aa14.15□□□□□ -0.14
PRKN-206ENST00000366898 IPO8O15397 1037 aaKnown RBP14.14□□□□□ -0.15
PRKN-206ENST00000366898 RDXP35241 583 aaKnown RBP14.14□□□□□ -0.15
PRKN-206ENST00000366898 ZNF830Q96NB3 372 aaPredicted RBP14.14□□□□□ -0.15
PRKN-206ENST00000366898 PRKAR2BP31323 418 aa14.14□□□□□ -0.15
PRKN-206ENST00000366898 C14orf93Q9H972 538 aaKnown RBP14.14□□□□□ -0.15
PRKN-206ENST00000366898 RNF123Q5XPI4 1314 aa14.13□□□□□ -0.15
PRKN-206ENST00000366898 WDR7Q9Y4E6 1490 aa14.13□□□□□ -0.15
PRKN-206ENST00000366898 IGHDP01880 384 aa14.13□□□□□ -0.15
PRKN-206ENST00000366898 LTV1Q96GA3 475 aaPredicted RBP14.13□□□□□ -0.15
PRKN-206ENST00000366898 GPRASP1Q5JY77 1395 aa14.13□□□□□ -0.15
PRKN-206ENST00000366898 PDZRN3Q9UPQ7 1066 aa14.13□□□□□ -0.15
PRKN-206ENST00000366898 ARHGEF5Q12774 1597 aa14.12□□□□□ -0.15
PRKN-206ENST00000366898 MAGI2Q86UL8 1455 aa14.12□□□□□ -0.15
PRKN-206ENST00000366898 UGGT1Q9NYU2 1555 aa14.12□□□□□ -0.15
PRKN-206ENST00000366898 RTF1Q92541 710 aaKnown RBP14.12□□□□□ -0.15
PRKN-206ENST00000366898 TRIM5Q9C035 493 aa14.12□□□□□ -0.15
PRKN-206ENST00000366898 C1orf115Q9H7X2 142 aa14.12□□□□□ -0.15
PRKN-206ENST00000366898 HSP90B2PQ58FF3 399 aa14.12□□□□□ -0.15
PRKN-206ENST00000366898 TNPO1Q92973 898 aaKnown RBP14.12□□□□□ -0.15
PRKN-206ENST00000366898 KLHL34Q8N239 644 aa14.11□□□□□ -0.15
PRKN-206ENST00000366898 FBXW7Q969H0 707 aa14.11□□□□□ -0.15
PRKN-206ENST00000366898 COG3Q96JB2 828 aa14.11□□□□□ -0.15
PRKN-206ENST00000366898 AK7Q96M32 723 aa14.11□□□□□ -0.15
PRKN-206ENST00000366898 TTLL5Q6EMB2 1281 aa14.1□□□□□ -0.15
PRKN-206ENST00000366898 RARSP54136 660 aaKnown RBP14.1□□□□□ -0.15
PRKN-206ENST00000366898 RRS1Q15050 365 aaKnown RBP14.1□□□□□ -0.15
PRKN-206ENST00000366898 SLC4A10Q6U841 1118 aa14.1□□□□□ -0.15
PRKN-206ENST00000366898 ASXL1Q8IXJ9 1541 aa14.1□□□□□ -0.15
PRKN-206ENST00000366898 MAST1Q9Y2H9 1570 aa14.09□□□□□ -0.15
PRKN-206ENST00000366898 CFAP44Q96MT7 982 aa14.09□□□□□ -0.15
PRKN-206ENST00000366898 KDM5DQ9BY66 1539 aa14.09□□□□□ -0.15
PRKN-206ENST00000366898 PDE3AQ14432 1141 aa14.09□□□□□ -0.15
PRKN-206ENST00000366898 NOB1Q9ULX3 412 aaKnown RBP14.09□□□□□ -0.15
PRKN-206ENST00000366898 ZBTB9Q96C00 473 aa14.09□□□□□ -0.15
PRKN-206ENST00000366898 MBD3O95983 291 aa14.08□□□□□ -0.15
PRKN-206ENST00000366898 NUTM2GQ5VZR2 741 aa14.08□□□□□ -0.15
PRKN-206ENST00000366898 SLC52A1Q9NWF4 448 aa14.08□□□□□ -0.15
PRKN-206ENST00000366898 C10orf67Q8IYJ2 551 aa14.08□□□□□ -0.16
PRKN-206ENST00000366898 NECTIN2Q92692 538 aa14.08□□□□□ -0.16
PRKN-206ENST00000366898 PREX2Q70Z35 1606 aa14.08□□□□□ -0.16
PRKN-206ENST00000366898 LMOD3Q0VAK6 560 aa14.08□□□□□ -0.16
PRKN-206ENST00000366898 NGDNQ8NEJ9 315 aaKnown RBP14.08□□□□□ -0.16
PRKN-206ENST00000366898 NKTRP30414 1462 aaKnown RBP14.08□□□□□ -0.16
PRKN-206ENST00000366898 U2AF2P26368 475 aaKnown RBP eCLIP14.07□□□□□ -0.16
PRKN-206ENST00000366898 TMPOP42166 694 aaKnown RBP14.07□□□□□ -0.16
PRKN-206ENST00000366898 HDGFP51858 240 aaKnown RBP14.07□□□□□ -0.16
PRKN-206ENST00000366898 ATP10AO60312 1499 aa14.07□□□□□ -0.16
PRKN-206ENST00000366898 NGEFQ8N5V2 710 aa14.07□□□□□ -0.16
PRKN-206ENST00000366898 ZKSCAN5Q9Y2L8 839 aa14.07□□□□□ -0.16
PRKN-206ENST00000366898 SSFA2P28290 1259 aa14.07□□□□□ -0.16
PRKN-206ENST00000366898 TPM4P67936 248 aa14.07□□□□□ -0.16
PRKN-206ENST00000366898 C16orf45Q96MC5 204 aaPredicted RBP14.07□□□□□ -0.16
PRKN-206ENST00000366898 USP25Q9UHP3 1055 aa14.07□□□□□ -0.16
PRKN-206ENST00000366898 ADCY10Q96PN6 1610 aa14.07□□□□□ -0.16
PRKN-206ENST00000366898 BRD2P25440 801 aaKnown RBP14.06□□□□□ -0.16
PRKN-206ENST00000366898 PLCD4Q9BRC7 762 aa14.06□□□□□ -0.16
PRKN-206ENST00000366898 MYO5CQ9NQX4 1742 aa14.06□□□□□ -0.16
PRKN-206ENST00000366898 HDAC5Q9UQL6 1122 aa14.06□□□□□ -0.16
PRKN-206ENST00000366898 RLBP1P12271 317 aa14.06□□□□□ -0.16
PRKN-206ENST00000366898 PRIMPOLQ96LW4 560 aa14.06□□□□□ -0.16
PRKN-206ENST00000366898 CDC42BPBQ9Y5S2 1711 aa14.06□□□□□ -0.16
PRKN-206ENST00000366898 DCTN1Q14203 1278 aa14.05□□□□□ -0.16
PRKN-206ENST00000366898 SSH1Q8WYL5 1049 aa14.05□□□□□ -0.16
PRKN-206ENST00000366898 SLC26A8Q96RN1 970 aa14.05□□□□□ -0.16
PRKN-206ENST00000366898 NOL10Q9BSC4 688 aaKnown RBP14.05□□□□□ -0.16
PRKN-206ENST00000366898 DDX19BQ9UMR2 479 aa14.05□□□□□ -0.16
PRKN-206ENST00000366898 RPGRIP1LQ68CZ1 1315 aa14.05□□□□□ -0.16
PRKN-206ENST00000366898 DMTNQ08495 405 aa14.05□□□□□ -0.16
PRKN-206ENST00000366898 EMILIN1Q9Y6C2 1016 aa14.05□□□□□ -0.16
PRKN-206ENST00000366898 WDR63Q8IWG1 891 aa14.04□□□□□ -0.16
PRKN-206ENST00000366898 GIMAP7Q8NHV1 300 aa14.04□□□□□ -0.16
PRKN-206ENST00000366898 CROCC2H7BZ55 1655 aa14.04□□□□□ -0.16
PRKN-206ENST00000366898 ATP7AQ04656 1500 aa14.04□□□□□ -0.16
PRKN-206ENST00000366898 NME9Q86XW9 330 aa14.04□□□□□ -0.16
PRKN-206ENST00000366898 EIF2AK4Q9P2K8 1649 aaKnown RBP14.04□□□□□ -0.16
PRKN-206ENST00000366898 TPM3P06753 285 aa14.04□□□□□ -0.16
PRKN-206ENST00000366898 KRT222Q8N1A0 295 aa14.04□□□□□ -0.16
PRKN-206ENST00000366898 TTC12Q9H892 705 aaPredicted RBP14.04□□□□□ -0.16
PRKN-206ENST00000366898 RBM27Q9P2N5 1060 aaKnown RBP14.04□□□□□ -0.16
PRKN-206ENST00000366898 PCDHB15Q9Y5E8 787 aa14.04□□□□□ -0.16
PRKN-206ENST00000366898 AMPHP49418 695 aa14.03□□□□□ -0.16
PRKN-206ENST00000366898 ZBTB22O15209 634 aa14.03□□□□□ -0.16
PRKN-206ENST00000366898 NOLC1Q14978 699 aaKnown RBP eCLIP14.03□□□□□ -0.16
PRKN-206ENST00000366898 ZRANB1Q9UGI0 708 aa14.03□□□□□ -0.16
PRKN-206ENST00000366898 CIZ1Q9ULV3 898 aaPredicted RBP14.03□□□□□ -0.16
PRKN-206ENST00000366898 MCM5P33992 734 aa14.02□□□□□ -0.16
PRKN-206ENST00000366898 MVPQ14764 893 aaKnown RBP14.02□□□□□ -0.16
PRKN-206ENST00000366898 CENPHQ9H3R5 247 aa14.02□□□□□ -0.16
PRKN-206ENST00000366898 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.02□□□□□ -0.16
PRKN-206ENST00000366898 V9GYY5 206 aaPredicted RBP14.02□□□□□ -0.16
PRKN-206ENST00000366898 NCKAP5LQ9HCH0 1330 aa14.02□□□□□ -0.16
PRKN-206ENST00000366898 RTEL1-TNFRSF6BF6WH68 1400 aa14.02□□□□□ -0.16
PRKN-206ENST00000366898 SHROOM2Q13796 1616 aa14.02□□□□□ -0.16
PRKN-206ENST00000366898 K7ELQ4 463 aaPredicted RBP14.02□□□□□ -0.17
PRKN-206ENST00000366898 HSP90B1P14625 803 aaKnown RBP14.02□□□□□ -0.17
PRKN-206ENST00000366898 FAM193AP78312 1265 aa14.02□□□□□ -0.17
PRKN-206ENST00000366898 CCDC27Q2M243 656 aa14.02□□□□□ -0.17
PRKN-206ENST00000366898 TMEM57Q8N5G2 664 aa14.02□□□□□ -0.17
PRKN-206ENST00000366898 CLGNO14967 610 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms