RNA–Protein interactions for RNA: ENST00000365052.1

RNU1-43P-201, Transcript of RNA, U1 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU1-43P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-43P-201ENST00000365052 NLRP2Q9NX02 1062 aa7.4□□□□□ -1.22
RNU1-43P-201ENST00000365052 AATKQ6ZMQ8 1374 aa7.4□□□□□ -1.22
RNU1-43P-201ENST00000365052 SBNO2Q9Y2G9 1366 aa7.4□□□□□ -1.22
RNU1-43P-201ENST00000365052 LMO7Q8WWI1 1683 aa7.39□□□□□ -1.23
RNU1-43P-201ENST00000365052 SLIT3O75094 1523 aa7.39□□□□□ -1.23
RNU1-43P-201ENST00000365052 COL5A2P05997 1499 aaPredicted RBP7.39□□□□□ -1.23
RNU1-43P-201ENST00000365052 CD163L1Q9NR16 1453 aa7.39□□□□□ -1.23
RNU1-43P-201ENST00000365052 CRB1P82279 1406 aa7.39□□□□□ -1.23
RNU1-43P-201ENST00000365052 A0A1W2PP64 1363 aa7.39□□□□□ -1.23
RNU1-43P-201ENST00000365052 USP47Q96K76 1375 aa7.39□□□□□ -1.23
RNU1-43P-201ENST00000365052 WDR17Q8IZU2 1322 aa7.39□□□□□ -1.23
RNU1-43P-201ENST00000365052 EXOC5O00471 708 aa7.39□□□□□ -1.23
RNU1-43P-201ENST00000365052 PUS7Q96PZ0 661 aaKnown RBP7.39□□□□□ -1.23
RNU1-43P-201ENST00000365052 GGNBP2Q9H3C7 697 aa7.39□□□□□ -1.23
RNU1-43P-201ENST00000365052 SLC24A1O60721 1099 aa7.38□□□□□ -1.23
RNU1-43P-201ENST00000365052 R3HDM1Q15032 1099 aaKnown RBP7.38□□□□□ -1.23
RNU1-43P-201ENST00000365052 PTF1AQ7RTS3 328 aa7.38□□□□□ -1.23
RNU1-43P-201ENST00000365052 MARCH10Q8NA82 808 aaPredicted RBP7.38□□□□□ -1.23
RNU1-43P-201ENST00000365052 ANKRD24Q8TF21 1146 aa7.38□□□□□ -1.23
RNU1-43P-201ENST00000365052 COG3Q96JB2 828 aa7.38□□□□□ -1.23
RNU1-43P-201ENST00000365052 CAMKK2Q96RR4 588 aa7.38□□□□□ -1.23
RNU1-43P-201ENST00000365052 CARD10Q9BWT7 1032 aa7.38□□□□□ -1.23
RNU1-43P-201ENST00000365052 COL18A1P39060 1754 aa7.38□□□□□ -1.23
RNU1-43P-201ENST00000365052 THSD7AQ9UPZ6 1657 aa7.38□□□□□ -1.23
RNU1-43P-201ENST00000365052 EDC4Q6P2E9 1401 aaKnown RBP7.37□□□□□ -1.23
RNU1-43P-201ENST00000365052 USP31Q70CQ4 1352 aa7.37□□□□□ -1.23
RNU1-43P-201ENST00000365052 AMPHP49418 695 aa7.37□□□□□ -1.23
RNU1-43P-201ENST00000365052 ACSBG1Q96GR2 724 aa7.37□□□□□ -1.23
RNU1-43P-201ENST00000365052 TIMELESSQ9UNS1 1208 aa7.37□□□□□ -1.23
RNU1-43P-201ENST00000365052 MON2Q7Z3U7 1717 aa7.37□□□□□ -1.23
RNU1-43P-201ENST00000365052 FYB1O15117 783 aa7.36□□□□□ -1.23
RNU1-43P-201ENST00000365052 HSPA5P11021 654 aaKnown RBP7.36□□□□□ -1.23
RNU1-43P-201ENST00000365052 RRS1Q15050 365 aaKnown RBP7.36□□□□□ -1.23
RNU1-43P-201ENST00000365052 IP6K1Q92551 441 aa7.36□□□□□ -1.23
RNU1-43P-201ENST00000365052 KCNQ2O43526 872 aa7.35□□□□□ -1.23
RNU1-43P-201ENST00000365052 CDCA8Q53HL2 280 aa7.35□□□□□ -1.23
RNU1-43P-201ENST00000365052 DDX54Q8TDD1 881 aaKnown RBP7.35□□□□□ -1.23
RNU1-43P-201ENST00000365052 CARD14Q9BXL6 1004 aa7.35□□□□□ -1.23
RNU1-43P-201ENST00000365052 NFAT5O94916 1531 aa7.35□□□□□ -1.23
RNU1-43P-201ENST00000365052 RGPD1P0DJD0 1748 aa7.35□□□□□ -1.23
RNU1-43P-201ENST00000365052 ANKRD36BQ8N2N9 1353 aa7.34□□□□□ -1.23
RNU1-43P-201ENST00000365052 KAT6BQ8WYB5 2073 aa7.34□□□□□ -1.23
RNU1-43P-201ENST00000365052 ERBB3P21860 1342 aa7.34□□□□□ -1.23
RNU1-43P-201ENST00000365052 MAP3K19Q56UN5 1328 aa7.34□□□□□ -1.23
RNU1-43P-201ENST00000365052 CLSPNQ9HAW4 1339 aa7.34□□□□□ -1.23
RNU1-43P-201ENST00000365052 PPM1GO15355 546 aaPredicted RBP7.34□□□□□ -1.23
RNU1-43P-201ENST00000365052 IL2RBP14784 551 aa7.34□□□□□ -1.23
RNU1-43P-201ENST00000365052 HOXC9P31274 260 aa7.34□□□□□ -1.23
RNU1-43P-201ENST00000365052 EIF4G2P78344 907 aaKnown RBP eCLIP7.34□□□□□ -1.23
RNU1-43P-201ENST00000365052 NBPF14Q5TI25 921 aa7.34□□□□□ -1.23
RNU1-43P-201ENST00000365052 USHBP1Q8N6Y0 703 aa7.34□□□□□ -1.23
RNU1-43P-201ENST00000365052 CDCA7Q9BWT1 371 aaPredicted RBP7.34□□□□□ -1.23
RNU1-43P-201ENST00000365052 LTN1O94822 1766 aa7.33□□□□□ -1.24
RNU1-43P-201ENST00000365052 BCL11BQ9C0K0 894 aaPredicted RBP7.33□□□□□ -1.24
RNU1-43P-201ENST00000365052 OVOS2A0A0G2JMS6 1433 aa7.33□□□□□ -1.24
RNU1-43P-201ENST00000365052 OVOS2A0A0J9YW53 1432 aa7.33□□□□□ -1.24
RNU1-43P-201ENST00000365052 OVOS2Q6IE36 1432 aa7.33□□□□□ -1.24
RNU1-43P-201ENST00000365052 CCDC7Q96M83 1385 aa7.33□□□□□ -1.24
RNU1-43P-201ENST00000365052 NINLQ9Y2I6 1382 aa7.33□□□□□ -1.24
RNU1-43P-201ENST00000365052 TNS1Q9HBL0 1735 aaKnown RBP7.32□□□□□ -1.24
RNU1-43P-201ENST00000365052 PARP4Q9UKK3 1724 aaKnown RBP7.32□□□□□ -1.24
RNU1-43P-201ENST00000365052 C11orf95C9JLR9 678 aaPredicted RBP7.32□□□□□ -1.24
RNU1-43P-201ENST00000365052 TNNT2P45379 298 aaPredicted RBP7.32□□□□□ -1.24
RNU1-43P-201ENST00000365052 HSP90AB2PQ58FF8 381 aa7.32□□□□□ -1.24
RNU1-43P-201ENST00000365052 NBPF6Q5VWK0 638 aa7.32□□□□□ -1.24
RNU1-43P-201ENST00000365052 PROM2Q8N271 834 aa7.32□□□□□ -1.24
RNU1-43P-201ENST00000365052 NBPF4Q96M43 638 aa7.32□□□□□ -1.24
RNU1-43P-201ENST00000365052 LRRC37A3O60309 1634 aa7.31□□□□□ -1.24
RNU1-43P-201ENST00000365052 DISP2A7MBM2 1401 aa7.31□□□□□ -1.24
RNU1-43P-201ENST00000365052 PLSCR1O15162 318 aa7.31□□□□□ -1.24
RNU1-43P-201ENST00000365052 SYTL4Q96C24 671 aaPredicted RBP7.31□□□□□ -1.24
RNU1-43P-201ENST00000365052 EMILIN1Q9Y6C2 1016 aa7.31□□□□□ -1.24
RNU1-43P-201ENST00000365052 SBF2Q86WG5 1849 aa7.31□□□□□ -1.24
RNU1-43P-201ENST00000365052 RGPD2P0DJD1 1756 aa7.31□□□□□ -1.24
RNU1-43P-201ENST00000365052 NSD3Q9BZ95 1437 aa7.3□□□□□ -1.24
RNU1-43P-201ENST00000365052 CNGB1Q14028 1251 aaPredicted RBP7.3□□□□□ -1.24
RNU1-43P-201ENST00000365052 TXNRD1Q16881 649 aa7.3□□□□□ -1.24
RNU1-43P-201ENST00000365052 ZCRB1Q8TBF4 217 aaKnown RBP7.3□□□□□ -1.24
RNU1-43P-201ENST00000365052 PANK3Q9H999 370 aa7.3□□□□□ -1.24
RNU1-43P-201ENST00000365052 USP54Q70EL1 1684 aa7.29□□□□□ -1.24
RNU1-43P-201ENST00000365052 TATP17735 454 aaPredicted RBP7.29□□□□□ -1.24
RNU1-43P-201ENST00000365052 PRIM1P49642 420 aaKnown RBP7.29□□□□□ -1.24
RNU1-43P-201ENST00000365052 KCNQ4P56696 695 aa7.29□□□□□ -1.24
RNU1-43P-201ENST00000365052 PDGFDQ9GZP0 370 aaPredicted RBP7.29□□□□□ -1.24
RNU1-43P-201ENST00000365052 ANO8Q9HCE9 1232 aaPredicted RBP7.29□□□□□ -1.24
RNU1-43P-201ENST00000365052 PEAK1Q9H792 1746 aa7.29□□□□□ -1.24
RNU1-43P-201ENST00000365052 WNK3Q9BYP7 1800 aa7.29□□□□□ -1.24
RNU1-43P-201ENST00000365052 RAPGEF4Q8WZA2 1011 aa7.28□□□□□ -1.24
RNU1-43P-201ENST00000365052 ATF5Q9Y2D1 282 aaPredicted RBP7.28□□□□□ -1.24
RNU1-43P-201ENST00000365052 TNS2Q63HR2 1409 aa7.27□□□□□ -1.24
RNU1-43P-201ENST00000365052 ZBTB7AO95365 584 aa7.27□□□□□ -1.25
RNU1-43P-201ENST00000365052 SLC15A2Q16348 729 aa7.27□□□□□ -1.25
RNU1-43P-201ENST00000365052 STK32BQ9NY57 414 aa7.27□□□□□ -1.25
RNU1-43P-201ENST00000365052 POLKQ9UBT6 870 aa7.27□□□□□ -1.25
RNU1-43P-201ENST00000365052 PPP1R1BQ9UD71 204 aaPredicted RBP7.27□□□□□ -1.25
RNU1-43P-201ENST00000365052 PARD3Q8TEW0 1356 aa7.27□□□□□ -1.25
RNU1-43P-201ENST00000365052 MYOM1P52179 1685 aa7.27□□□□□ -1.25
RNU1-43P-201ENST00000365052 MAP2P11137 1827 aaKnown RBP7.27□□□□□ -1.25
RNU1-43P-201ENST00000365052 KIF20BQ96Q89 1820 aa7.27□□□□□ -1.25
RNU1-43P-201ENST00000365052 NUP188Q5SRE5 1749 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms