RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 LINC01559Q495D7 138 aa3.75□□□□□ -1.81
RNU6-228P-201ENST00000362700 GMCL1Q96IK5 515 aa3.75□□□□□ -1.81
RNU6-228P-201ENST00000362700 PCMTD2Q9NV79 361 aa3.75□□□□□ -1.81
RNU6-228P-201ENST00000362700 CUEDC1Q9NWM3 386 aaPredicted RBP3.75□□□□□ -1.81
RNU6-228P-201ENST00000362700 EDARADDQ8WWZ3 215 aa3.74□□□□□ -1.81
RNU6-228P-201ENST00000362700 ZNF837Q96EG3 531 aaPredicted RBP3.74□□□□□ -1.81
RNU6-228P-201ENST00000362700 TRERF1Q96PN7 1200 aa3.74□□□□□ -1.81
RNU6-228P-201ENST00000362700 NUDT12Q9BQG2 462 aa3.74□□□□□ -1.81
RNU6-228P-201ENST00000362700 KRTAP9-7A8MTY7 169 aa3.73□□□□□ -1.81
RNU6-228P-201ENST00000362700 SPINT1O43278 529 aa3.73□□□□□ -1.81
RNU6-228P-201ENST00000362700 MAP2K3P46734 347 aa3.73□□□□□ -1.81
RNU6-228P-201ENST00000362700 GCGRP47871 477 aa3.73□□□□□ -1.81
RNU6-228P-201ENST00000362700 FAM161AQ3B820 660 aa3.73□□□□□ -1.81
RNU6-228P-201ENST00000362700 CDK15Q96Q40 435 aa3.73□□□□□ -1.81
RNU6-228P-201ENST00000362700 H2AFB1P0C5Y9 115 aa3.72□□□□□ -1.81
RNU6-228P-201ENST00000362700 H2AFB2P0C5Z0 115 aa3.72□□□□□ -1.81
RNU6-228P-201ENST00000362700 HOXB4P17483 251 aaPredicted RBP3.71□□□□□ -1.82
RNU6-228P-201ENST00000362700 JUNDP17535 347 aa3.71□□□□□ -1.82
RNU6-228P-201ENST00000362700 GIGYF2Q6Y7W6 1299 aaKnown RBP3.71□□□□□ -1.82
RNU6-228P-201ENST00000362700 BAP1Q92560 729 aa3.71□□□□□ -1.82
RNU6-228P-201ENST00000362700 GDF2Q9UK05 429 aaPredicted RBP3.71□□□□□ -1.82
RNU6-228P-201ENST00000362700 DDX11L8A8MPP1 907 aa3.7□□□□□ -1.82
RNU6-228P-201ENST00000362700 C8AP07357 584 aa3.7□□□□□ -1.82
RNU6-228P-201ENST00000362700 SPATA31C1P0DKV0 1188 aa3.7□□□□□ -1.82
RNU6-228P-201ENST00000362700 C1orf229Q6ZS94 237 aaPredicted RBP3.7□□□□□ -1.82
RNU6-228P-201ENST00000362700 TRIM22Q8IYM9 498 aa3.7□□□□□ -1.82
RNU6-228P-201ENST00000362700 ZNF511Q8NB15 262 aa3.7□□□□□ -1.82
RNU6-228P-201ENST00000362700 DNAJC5Q9H3Z4 198 aa3.69□□□□□ -1.82
RNU6-228P-201ENST00000362700 RNF112Q9ULX5 631 aa3.69□□□□□ -1.82
RNU6-228P-201ENST00000362700 PSPNO60542 156 aa3.68□□□□□ -1.82
RNU6-228P-201ENST00000362700 APBA3O96018 575 aa3.68□□□□□ -1.82
RNU6-228P-201ENST00000362700 CHGAP10645 457 aaKnown RBP3.68□□□□□ -1.82
RNU6-228P-201ENST00000362700 GTPBP3Q969Y2 492 aaKnown RBP3.68□□□□□ -1.82
RNU6-228P-201ENST00000362700 UNC93B1Q9H1C4 597 aa3.68□□□□□ -1.82
RNU6-228P-201ENST00000362700 OATP04181 439 aa3.67□□□□□ -1.82
RNU6-228P-201ENST00000362700 CTSOP43234 321 aaPredicted RBP3.67□□□□□ -1.82
RNU6-228P-201ENST00000362700 GOLGA6L1Q8N7Z2 621 aa3.67□□□□□ -1.82
RNU6-228P-201ENST00000362700 PXYLP1Q8TE99 480 aa3.67□□□□□ -1.82
RNU6-228P-201ENST00000362700 KRTAP9-3Q9BYQ3 159 aa3.67□□□□□ -1.82
RNU6-228P-201ENST00000362700 POLMQ9NP87 494 aaPredicted RBP3.67□□□□□ -1.82
RNU6-228P-201ENST00000362700 EMILIN1Q9Y6C2 1016 aa3.67□□□□□ -1.82
RNU6-228P-201ENST00000362700 NCANO14594 1321 aa3.67□□□□□ -1.82
RNU6-228P-201ENST00000362700 PRRG2O14669 202 aa3.66□□□□□ -1.82
RNU6-228P-201ENST00000362700 CCNYL3P0C7X3 344 aa3.66□□□□□ -1.82
RNU6-228P-201ENST00000362700 DGKGP49619 791 aa3.66□□□□□ -1.82
RNU6-228P-201ENST00000362700 CADPS2Q86UW7 1296 aa3.66□□□□□ -1.82
RNU6-228P-201ENST00000362700 RNF217Q8TC41 542 aa3.66□□□□□ -1.82
RNU6-228P-201ENST00000362700 H7C1W4 665 aa3.65□□□□□ -1.83
RNU6-228P-201ENST00000362700 FCHSD2O94868 740 aa3.65□□□□□ -1.83
RNU6-228P-201ENST00000362700 GRM5P41594 1212 aa3.65□□□□□ -1.83
RNU6-228P-201ENST00000362700 PTGDRQ13258 359 aa3.65□□□□□ -1.83
RNU6-228P-201ENST00000362700 DBN1Q16643 649 aa3.65□□□□□ -1.83
RNU6-228P-201ENST00000362700 PRPF38BQ5VTL8 546 aaKnown RBP3.65□□□□□ -1.83
RNU6-228P-201ENST00000362700 OGFOD2Q6N063 350 aa3.65□□□□□ -1.83
RNU6-228P-201ENST00000362700 SPOCD1Q6ZMY3 1216 aa3.65□□□□□ -1.83
RNU6-228P-201ENST00000362700 RIPOR1Q6ZS17 1223 aa3.65□□□□□ -1.83
RNU6-228P-201ENST00000362700 SULF1Q8IWU6 871 aa3.65□□□□□ -1.83
RNU6-228P-201ENST00000362700 DAXXQ9UER7 740 aaPredicted RBP3.65□□□□□ -1.83
RNU6-228P-201ENST00000362700 OAS3Q9Y6K5 1087 aaKnown RBP3.65□□□□□ -1.83
RNU6-228P-201ENST00000362700 TRIM52Q96A61 297 aa3.64□□□□□ -1.83
RNU6-228P-201ENST00000362700 KLRG1Q96E93 195 aa3.64□□□□□ -1.83
RNU6-228P-201ENST00000362700 INSM2Q96T92 566 aaPredicted RBP3.64□□□□□ -1.83
RNU6-228P-201ENST00000362700 BTBD6Q96KE9 485 aa3.63□□□□□ -1.83
RNU6-228P-201ENST00000362700 JAG2Q9Y219 1238 aa3.63□□□□□ -1.83
RNU6-228P-201ENST00000362700 B8ZZF3 427 aa3.62□□□□□ -1.83
RNU6-228P-201ENST00000362700 FSHRP23945 695 aa3.62□□□□□ -1.83
RNU6-228P-201ENST00000362700 GP2P55259 537 aaKnown RBP3.62□□□□□ -1.83
RNU6-228P-201ENST00000362700 PRRT3Q5FWE3 981 aa3.62□□□□□ -1.83
RNU6-228P-201ENST00000362700 CBLBQ13191 982 aa3.61□□□□□ -1.83
RNU6-228P-201ENST00000362700 PKD2Q13563 968 aa3.61□□□□□ -1.83
RNU6-228P-201ENST00000362700 SLCO4C1Q6ZQN7 724 aa3.61□□□□□ -1.83
RNU6-228P-201ENST00000362700 Q6ZVU0 165 aa3.61□□□□□ -1.83
RNU6-228P-201ENST00000362700 POU5F2Q8N7G0 328 aa3.61□□□□□ -1.83
RNU6-228P-201ENST00000362700 NACC1Q96RE7 527 aa3.61□□□□□ -1.83
RNU6-228P-201ENST00000362700 PLVAPQ9BX97 442 aa3.61□□□□□ -1.83
RNU6-228P-201ENST00000362700 SPDYE3A6NKU9 549 aa3.6□□□□□ -1.83
RNU6-228P-201ENST00000362700 ZNF865P0CJ78 1059 aaPredicted RBP3.6□□□□□ -1.83
RNU6-228P-201ENST00000362700 CCDC116Q8IYX3 515 aa3.6□□□□□ -1.83
RNU6-228P-201ENST00000362700 PGPEP1Q9NXJ5 209 aa3.6□□□□□ -1.83
RNU6-228P-201ENST00000362700 GTPBP6O43824 516 aaPredicted RBP3.59□□□□□ -1.83
RNU6-228P-201ENST00000362700 MS4A1P11836 297 aa3.59□□□□□ -1.83
RNU6-228P-201ENST00000362700 SSTR4P31391 388 aa3.59□□□□□ -1.83
RNU6-228P-201ENST00000362700 BUD31P41223 144 aaPredicted RBP3.59□□□□□ -1.83
RNU6-228P-201ENST00000362700 RELBQ01201 579 aa3.59□□□□□ -1.83
RNU6-228P-201ENST00000362700 LYSMD3Q7Z3D4 306 aa3.59□□□□□ -1.83
RNU6-228P-201ENST00000362700 METTL3Q86U44 580 aaKnown RBP3.59□□□□□ -1.83
RNU6-228P-201ENST00000362700 CSRNP1Q96S65 589 aa3.59□□□□□ -1.83
RNU6-228P-201ENST00000362700 EVA1BQ9NVM1 165 aa3.59□□□□□ -1.83
RNU6-228P-201ENST00000362700 KCNH2Q12809 1159 aa3.58□□□□□ -1.84
RNU6-228P-201ENST00000362700 TRIM11Q96F44 468 aa3.58□□□□□ -1.84
RNU6-228P-201ENST00000362700 EPXP11678 715 aa3.57□□□□□ -1.84
RNU6-228P-201ENST00000362700 PTPRNQ16849 979 aa3.57□□□□□ -1.84
RNU6-228P-201ENST00000362700 LILRA6Q6PI73 481 aa3.57□□□□□ -1.84
RNU6-228P-201ENST00000362700 FOXJ1Q92949 421 aa3.57□□□□□ -1.84
RNU6-228P-201ENST00000362700 GGA1Q9UJY5 639 aa3.57□□□□□ -1.84
RNU6-228P-201ENST00000362700 AGERQ15109 404 aa3.56□□□□□ -1.84
RNU6-228P-201ENST00000362700 AGBL1Q96MI9 1066 aa3.56□□□□□ -1.84
RNU6-228P-201ENST00000362700 CFHR5Q9BXR6 569 aa3.56□□□□□ -1.84
RNU6-228P-201ENST00000362700 PHF24Q9UPV7 400 aa3.56□□□□□ -1.84
RNU6-228P-201ENST00000362700 DBX1A6NMT0 343 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms