RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 EIF4A2Q14240 407 aaKnown RBP11.51□□□□□ -0.57
CALD1-202ENST00000361901 C1orf115Q9H7X2 142 aa11.51□□□□□ -0.57
CALD1-202ENST00000361901 ZNF330Q9Y3S2 320 aaPredicted RBP11.51□□□□□ -0.57
CALD1-202ENST00000361901 NEXMIFQ5QGS0 1516 aa11.5□□□□□ -0.57
CALD1-202ENST00000361901 PIK3C2BO00750 1634 aa11.5□□□□□ -0.57
CALD1-202ENST00000361901 ALKQ9UM73 1620 aa11.5□□□□□ -0.57
CALD1-202ENST00000361901 CENPQQ7L2Z9 268 aaPredicted RBP11.5□□□□□ -0.57
CALD1-202ENST00000361901 CABLES1Q8TDN4 633 aa11.5□□□□□ -0.57
CALD1-202ENST00000361901 PDE4AP27815 886 aa11.49□□□□□ -0.57
CALD1-202ENST00000361901 C1orf141Q5JVX7 400 aa11.49□□□□□ -0.57
CALD1-202ENST00000361901 MAP3K19Q56UN5 1328 aa11.49□□□□□ -0.57
CALD1-202ENST00000361901 NKTRP30414 1462 aaKnown RBP11.49□□□□□ -0.57
CALD1-202ENST00000361901 ZFYVE9O95405 1425 aa11.49□□□□□ -0.57
CALD1-202ENST00000361901 KRT28Q7Z3Y7 464 aa11.48□□□□□ -0.57
CALD1-202ENST00000361901 AEBP2Q6ZN18 517 aaPredicted RBP11.48□□□□□ -0.57
CALD1-202ENST00000361901 KRT24Q2M2I5 525 aa11.48□□□□□ -0.57
CALD1-202ENST00000361901 CHRNA2Q15822 529 aa11.47□□□□□ -0.57
CALD1-202ENST00000361901 PREX1Q8TCU6 1659 aa11.47□□□□□ -0.57
CALD1-202ENST00000361901 PLEKHG1Q9ULL1 1385 aa11.47□□□□□ -0.57
CALD1-202ENST00000361901 EVA1CP58658 441 aa11.46□□□□□ -0.57
CALD1-202ENST00000361901 LRRC59Q96AG4 307 aaKnown RBP11.46□□□□□ -0.57
CALD1-202ENST00000361901 STRN4Q9NRL3 753 aa11.46□□□□□ -0.57
CALD1-202ENST00000361901 QRICH2Q9H0J4 1663 aa11.46□□□□□ -0.58
CALD1-202ENST00000361901 FKBP5Q13451 457 aaPredicted RBP11.46□□□□□ -0.58
CALD1-202ENST00000361901 PAXIP1Q6ZW49 1069 aaPredicted RBP11.46□□□□□ -0.58
CALD1-202ENST00000361901 RAPGEF4Q8WZA2 1011 aa11.46□□□□□ -0.58
CALD1-202ENST00000361901 BLMP54132 1417 aaPredicted RBP11.46□□□□□ -0.58
CALD1-202ENST00000361901 TULP4Q9NRJ4 1543 aa11.46□□□□□ -0.58
CALD1-202ENST00000361901 IL13P35225 146 aa11.45□□□□□ -0.58
CALD1-202ENST00000361901 PDE3AQ14432 1141 aa11.45□□□□□ -0.58
CALD1-202ENST00000361901 ATF7IPQ6VMQ6 1270 aa11.45□□□□□ -0.58
CALD1-202ENST00000361901 TSPYL6Q8N831 410 aa11.45□□□□□ -0.58
CALD1-202ENST00000361901 ANP32BQ92688 251 aaKnown RBP11.45□□□□□ -0.58
CALD1-202ENST00000361901 DDX19BQ9UMR2 479 aa11.45□□□□□ -0.58
CALD1-202ENST00000361901 TRIM35Q9UPQ4 493 aa11.45□□□□□ -0.58
CALD1-202ENST00000361901 CCDC9Q9Y3X0 531 aaKnown RBP11.45□□□□□ -0.58
CALD1-202ENST00000361901 SLC4A2P04920 1241 aa11.45□□□□□ -0.58
CALD1-202ENST00000361901 ANKRD45Q5TZF3 282 aa11.45□□□□□ -0.58
CALD1-202ENST00000361901 ZNF530Q6P9A1 599 aaPredicted RBP11.45□□□□□ -0.58
CALD1-202ENST00000361901 GAS2L2Q8NHY3 880 aa11.45□□□□□ -0.58
CALD1-202ENST00000361901 MBIPQ9NS73 344 aa11.45□□□□□ -0.58
CALD1-202ENST00000361901 TMEM57Q8N5G2 664 aa11.45□□□□□ -0.58
CALD1-202ENST00000361901 ADGRB1O14514 1584 aa11.45□□□□□ -0.58
CALD1-202ENST00000361901 EDC4Q6P2E9 1401 aaKnown RBP11.45□□□□□ -0.58
CALD1-202ENST00000361901 SIGLEC1Q9BZZ2 1709 aa11.45□□□□□ -0.58
CALD1-202ENST00000361901 RLBP1P12271 317 aa11.45□□□□□ -0.58
CALD1-202ENST00000361901 EYA1Q99502 592 aa11.45□□□□□ -0.58
CALD1-202ENST00000361901 AGLP35573 1532 aa11.45□□□□□ -0.58
CALD1-202ENST00000361901 KIF16BQ96L93 1317 aa11.45□□□□□ -0.58
CALD1-202ENST00000361901 ARHGEF40Q8TER5 1519 aa11.44□□□□□ -0.58
CALD1-202ENST00000361901 PLEKHG3A1L390 1219 aa11.44□□□□□ -0.58
CALD1-202ENST00000361901 TAF7LQ5H9L4 462 aa11.44□□□□□ -0.58
CALD1-202ENST00000361901 IQGAP1P46940 1657 aa11.44□□□□□ -0.58
CALD1-202ENST00000361901 ZMYM4Q5VZL5 1548 aa11.44□□□□□ -0.58
CALD1-202ENST00000361901 LNPKQ9C0E8 428 aa11.44□□□□□ -0.58
CALD1-202ENST00000361901 GZF1Q9H116 711 aaPredicted RBP11.44□□□□□ -0.58
CALD1-202ENST00000361901 NRXN1Q9ULB1 1477 aa11.44□□□□□ -0.58
CALD1-202ENST00000361901 TRIM27P14373 513 aa11.43□□□□□ -0.58
CALD1-202ENST00000361901 MPRIPQ6WCQ1 1025 aa11.43□□□□□ -0.58
CALD1-202ENST00000361901 SPRYD3Q8NCJ5 442 aa11.43□□□□□ -0.58
CALD1-202ENST00000361901 PTPRMP28827 1452 aa11.43□□□□□ -0.58
CALD1-202ENST00000361901 C8orf58Q8NAV2 365 aa11.43□□□□□ -0.58
CALD1-202ENST00000361901 FAM13BQ9NYF5 915 aa11.43□□□□□ -0.58
CALD1-202ENST00000361901 OS9Q13438 667 aaPredicted RBP11.42□□□□□ -0.58
CALD1-202ENST00000361901 MTHFSDQ2M296 383 aaKnown RBP11.42□□□□□ -0.58
CALD1-202ENST00000361901 CHMP4BQ9H444 224 aaKnown RBP11.42□□□□□ -0.58
CALD1-202ENST00000361901 POLR1AO95602 1720 aaPredicted RBP11.42□□□□□ -0.58
CALD1-202ENST00000361901 NLRP1Q9C000 1473 aa11.42□□□□□ -0.58
CALD1-202ENST00000361901 MYO5BQ9ULV0 1848 aa11.42□□□□□ -0.58
CALD1-202ENST00000361901 FRAT2O75474 233 aaPredicted RBP11.42□□□□□ -0.58
CALD1-202ENST00000361901 AIMP1Q12904 312 aaKnown RBP11.42□□□□□ -0.58
CALD1-202ENST00000361901 MVPQ14764 893 aaKnown RBP11.42□□□□□ -0.58
CALD1-202ENST00000361901 SIRT1Q96EB6 747 aa11.42□□□□□ -0.58
CALD1-202ENST00000361901 C19orf44Q9H6X5 657 aa11.42□□□□□ -0.58
CALD1-202ENST00000361901 PRDM11Q9NQV5 511 aa11.42□□□□□ -0.58
CALD1-202ENST00000361901 LAMC1P11047 1609 aa11.42□□□□□ -0.58
CALD1-202ENST00000361901 TTC21AQ8NDW8 1320 aa11.42□□□□□ -0.58
CALD1-202ENST00000361901 SETBP1Q9Y6X0 1596 aa11.42□□□□□ -0.58
CALD1-202ENST00000361901 PPLO60437 1756 aa11.42□□□□□ -0.58
CALD1-202ENST00000361901 TMEM131LA2VDJ0 1609 aa11.42□□□□□ -0.58
CALD1-202ENST00000361901 IGHDP01880 384 aa11.41□□□□□ -0.58
CALD1-202ENST00000361901 NAP1L2Q9ULW6 460 aaPredicted RBP11.41□□□□□ -0.58
CALD1-202ENST00000361901 KCNH5Q8NCM2 988 aa11.41□□□□□ -0.58
CALD1-202ENST00000361901 GNAT3A8MTJ3 354 aa11.41□□□□□ -0.58
CALD1-202ENST00000361901 API5Q9BZZ5 524 aaKnown RBP11.41□□□□□ -0.58
CALD1-202ENST00000361901 GOLGA6L3A6NEY3 463 aa11.41□□□□□ -0.58
CALD1-202ENST00000361901 GCP02774 474 aa11.41□□□□□ -0.58
CALD1-202ENST00000361901 MFAP1P55081 439 aaKnown RBP11.41□□□□□ -0.58
CALD1-202ENST00000361901 F6X3S4 739 aa11.4□□□□□ -0.58
CALD1-202ENST00000361901 PLEKHO1Q53GL0 409 aaPredicted RBP11.4□□□□□ -0.58
CALD1-202ENST00000361901 CFAP44Q96MT7 982 aa11.4□□□□□ -0.58
CALD1-202ENST00000361901 ZHX1Q9UKY1 873 aaPredicted RBP11.4□□□□□ -0.58
CALD1-202ENST00000361901 PDZRN3Q9UPQ7 1066 aa11.4□□□□□ -0.58
CALD1-202ENST00000361901 IFT57Q9NWB7 429 aa11.4□□□□□ -0.58
CALD1-202ENST00000361901 SETD1BQ9UPS6 1966 aaKnown RBP11.4□□□□□ -0.58
CALD1-202ENST00000361901 HOXC9P31274 260 aa11.4□□□□□ -0.59
CALD1-202ENST00000361901 CCDC27Q2M243 656 aa11.4□□□□□ -0.59
CALD1-202ENST00000361901 TOM1L2Q6ZVM7 507 aa11.4□□□□□ -0.59
CALD1-202ENST00000361901 DDX54Q8TDD1 881 aaKnown RBP11.4□□□□□ -0.59
CALD1-202ENST00000361901 SYTL4Q96C24 671 aaPredicted RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms