RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 PRIM1P49642 420 aaKnown RBP16.57■□□□□ 0.24
SGMS1-202ENST00000361781 CSPP1Q1MSJ5 1256 aa16.57■□□□□ 0.24
SGMS1-202ENST00000361781 ZNF830Q96NB3 372 aaPredicted RBP16.57■□□□□ 0.24
SGMS1-202ENST00000361781 A0A0G2JS52 829 aa16.56■□□□□ 0.24
SGMS1-202ENST00000361781 CD2BP2O95400 341 aaKnown RBP16.56■□□□□ 0.24
SGMS1-202ENST00000361781 ZSCAN23Q3MJ62 389 aa16.56■□□□□ 0.24
SGMS1-202ENST00000361781 RAB3GAP1Q15042 981 aa16.56■□□□□ 0.24
SGMS1-202ENST00000361781 KLHL40Q2TBA0 621 aa16.56■□□□□ 0.24
SGMS1-202ENST00000361781 MBD3O95983 291 aa16.55■□□□□ 0.24
SGMS1-202ENST00000361781 ALDH1L2Q3SY69 923 aa16.55■□□□□ 0.24
SGMS1-202ENST00000361781 TRIM35Q9UPQ4 493 aa16.55■□□□□ 0.24
SGMS1-202ENST00000361781 LRRIQ1Q96JM4 1722 aa16.55■□□□□ 0.24
SGMS1-202ENST00000361781 SDSP20132 328 aa16.55■□□□□ 0.24
SGMS1-202ENST00000361781 NUP160Q12769 1436 aa16.54■□□□□ 0.24
SGMS1-202ENST00000361781 NUTM1Q86Y26 1132 aa16.54■□□□□ 0.24
SGMS1-202ENST00000361781 MEIS3Q99687 375 aa16.54■□□□□ 0.24
SGMS1-202ENST00000361781 CWC22Q9HCG8 908 aaKnown RBP16.54■□□□□ 0.24
SGMS1-202ENST00000361781 KIF21AQ7Z4S6 1674 aa16.53■□□□□ 0.24
SGMS1-202ENST00000361781 USP25Q9UHP3 1055 aa16.53■□□□□ 0.24
SGMS1-202ENST00000361781 WDR7Q9Y4E6 1490 aa16.53■□□□□ 0.24
SGMS1-202ENST00000361781 UBTFL1P0CB47 393 aaPredicted RBP16.53■□□□□ 0.24
SGMS1-202ENST00000361781 PKP1Q13835 747 aa16.53■□□□□ 0.24
SGMS1-202ENST00000361781 FBXO31Q5XUX0 539 aaPredicted RBP16.53■□□□□ 0.24
SGMS1-202ENST00000361781 PLA2R1Q13018 1463 aa16.53■□□□□ 0.24
SGMS1-202ENST00000361781 GNAI2P04899 355 aa16.52■□□□□ 0.23
SGMS1-202ENST00000361781 FERMT3Q86UX7 667 aa16.52■□□□□ 0.23
SGMS1-202ENST00000361781 VAMP4O75379 141 aa16.52■□□□□ 0.23
SGMS1-202ENST00000361781 SNX21Q969T3 373 aa16.52■□□□□ 0.23
SGMS1-202ENST00000361781 CFAP65Q6ZU64 1925 aaKnown RBP16.51■□□□□ 0.23
SGMS1-202ENST00000361781 GOLGA6L6A8MZA4 724 aa16.51■□□□□ 0.23
SGMS1-202ENST00000361781 IFT57Q9NWB7 429 aa16.51■□□□□ 0.23
SGMS1-202ENST00000361781 BICD2Q8TD16 824 aa16.51■□□□□ 0.23
SGMS1-202ENST00000361781 LRRCC1Q9C099 1032 aa16.51■□□□□ 0.23
SGMS1-202ENST00000361781 C9orf78Q9NZ63 289 aaPredicted RBP16.51■□□□□ 0.23
SGMS1-202ENST00000361781 TTC22Q5TAA0 569 aa16.5■□□□□ 0.23
SGMS1-202ENST00000361781 SHANK2Q9UPX8 1470 aa16.5■□□□□ 0.23
SGMS1-202ENST00000361781 ATP6V1DQ9Y5K8 247 aa16.5■□□□□ 0.23
SGMS1-202ENST00000361781 FAM177BA6PVY3 158 aa16.5■□□□□ 0.23
SGMS1-202ENST00000361781 ZBTB7BO15156 539 aaPredicted RBP16.5■□□□□ 0.23
SGMS1-202ENST00000361781 RPAP2Q8IXW5 612 aaPredicted RBP16.5■□□□□ 0.23
SGMS1-202ENST00000361781 ZNF330Q9Y3S2 320 aaPredicted RBP16.5■□□□□ 0.23
SGMS1-202ENST00000361781 CWC27Q6UX04 472 aaKnown RBP16.49■□□□□ 0.23
SGMS1-202ENST00000361781 AEBP1Q8IUX7 1158 aa16.49■□□□□ 0.23
SGMS1-202ENST00000361781 A0A0U1RQG5 324 aaPredicted RBP16.49■□□□□ 0.23
SGMS1-202ENST00000361781 NPHP1O15259 732 aa16.49■□□□□ 0.23
SGMS1-202ENST00000361781 RBM25P49756 843 aaKnown RBP16.49■□□□□ 0.23
SGMS1-202ENST00000361781 CEBPZQ03701 1054 aaKnown RBP16.49■□□□□ 0.23
SGMS1-202ENST00000361781 MRPL50Q8N5N7 158 aaKnown RBP16.49■□□□□ 0.23
SGMS1-202ENST00000361781 RBSNQ9H1K0 784 aa16.49■□□□□ 0.23
SGMS1-202ENST00000361781 INSRP06213 1382 aa16.48■□□□□ 0.23
SGMS1-202ENST00000361781 NCKAP5LQ9HCH0 1330 aa16.48■□□□□ 0.23
SGMS1-202ENST00000361781 AIMP1Q12904 312 aaKnown RBP16.48■□□□□ 0.23
SGMS1-202ENST00000361781 PLEKHM2Q8IWE5 1019 aa16.48■□□□□ 0.23
SGMS1-202ENST00000361781 H3BQV1 296 aa16.48■□□□□ 0.23
SGMS1-202ENST00000361781 IFIT2P09913 472 aaKnown RBP16.48■□□□□ 0.23
SGMS1-202ENST00000361781 STK3Q13188 491 aa16.48■□□□□ 0.23
SGMS1-202ENST00000361781 IFFO2Q5TF58 517 aa16.48■□□□□ 0.23
SGMS1-202ENST00000361781 ZKSCAN1P17029 563 aaPredicted RBP16.47■□□□□ 0.23
SGMS1-202ENST00000361781 HDGFP51858 240 aaKnown RBP16.47■□□□□ 0.23
SGMS1-202ENST00000361781 ABCC11Q96J66 1382 aa16.47■□□□□ 0.23
SGMS1-202ENST00000361781 CYB5RLQ6IPT4 315 aa16.47■□□□□ 0.23
SGMS1-202ENST00000361781 TMX3Q96JJ7 454 aa16.47■□□□□ 0.23
SGMS1-202ENST00000361781 PDCL3Q9H2J4 239 aa16.47■□□□□ 0.23
SGMS1-202ENST00000361781 FSD2A1L4K1 749 aa16.47■□□□□ 0.23
SGMS1-202ENST00000361781 POLKQ9UBT6 870 aa16.47■□□□□ 0.23
SGMS1-202ENST00000361781 GPATCH3Q96I76 525 aa16.46■□□□□ 0.23
SGMS1-202ENST00000361781 TEFQ10587 303 aa16.46■□□□□ 0.23
SGMS1-202ENST00000361781 CAMK4Q16566 473 aa16.46■□□□□ 0.23
SGMS1-202ENST00000361781 ZHX1Q9UKY1 873 aaPredicted RBP16.46■□□□□ 0.23
SGMS1-202ENST00000361781 ERBB4Q15303 1308 aa16.46■□□□□ 0.23
SGMS1-202ENST00000361781 BECN2A8MW95 431 aa16.46■□□□□ 0.23
SGMS1-202ENST00000361781 GNAI3P08754 354 aa16.46■□□□□ 0.23
SGMS1-202ENST00000361781 CDK11BP21127 795 aaKnown RBP16.46■□□□□ 0.23
SGMS1-202ENST00000361781 CBX1P83916 185 aa16.46■□□□□ 0.23
SGMS1-202ENST00000361781 HCLS1P14317 486 aaPredicted RBP16.45■□□□□ 0.22
SGMS1-202ENST00000361781 GOLGA6L19H0YKK7 550 aa16.45■□□□□ 0.22
SGMS1-202ENST00000361781 NLRP6P59044 892 aa16.45■□□□□ 0.22
SGMS1-202ENST00000361781 TRIM5Q9C035 493 aa16.45■□□□□ 0.22
SGMS1-202ENST00000361781 TTC12Q9H892 705 aaPredicted RBP16.45■□□□□ 0.22
SGMS1-202ENST00000361781 MX1P20591 662 aa16.45■□□□□ 0.22
SGMS1-202ENST00000361781 DUOX2Q9NRD8 1548 aa16.45■□□□□ 0.22
SGMS1-202ENST00000361781 PBRM1Q86U86 1689 aa16.45■□□□□ 0.22
SGMS1-202ENST00000361781 ZNF771Q7L3S4 317 aaPredicted RBP16.44■□□□□ 0.22
SGMS1-202ENST00000361781 FAM184AQ8NB25 1140 aa16.44■□□□□ 0.22
SGMS1-202ENST00000361781 A0A1W2PP64 1363 aa16.44■□□□□ 0.22
SGMS1-202ENST00000361781 ANKRD36BQ8N2N9 1353 aa16.44■□□□□ 0.22
SGMS1-202ENST00000361781 NPC1L1Q9UHC9 1359 aa16.44■□□□□ 0.22
SGMS1-202ENST00000361781 SRGAP3O43295 1099 aa16.44■□□□□ 0.22
SGMS1-202ENST00000361781 SPG7Q9UQ90 795 aa16.44■□□□□ 0.22
SGMS1-202ENST00000361781 WDR33Q9C0J8 1336 aaKnown RBP16.44■□□□□ 0.22
SGMS1-202ENST00000361781 RTEL1-TNFRSF6BF6WH68 1400 aa16.44■□□□□ 0.22
SGMS1-202ENST00000361781 MCM2P49736 904 aa16.44■□□□□ 0.22
SGMS1-202ENST00000361781 HDGFL1Q5TGJ6 251 aa16.44■□□□□ 0.22
SGMS1-202ENST00000361781 CCDC83Q8IWF9 413 aa16.44■□□□□ 0.22
SGMS1-202ENST00000361781 NUDT16Q96DE0 195 aaKnown RBP16.44■□□□□ 0.22
SGMS1-202ENST00000361781 ABCC10Q5T3U5 1492 aa16.44■□□□□ 0.22
SGMS1-202ENST00000361781 KDM5DQ9BY66 1539 aa16.43■□□□□ 0.22
SGMS1-202ENST00000361781 ADGRL1O94910 1474 aa16.43■□□□□ 0.22
SGMS1-202ENST00000361781 PTPRTO14522 1441 aa16.43■□□□□ 0.22
SGMS1-202ENST00000361781 TSC1Q92574 1164 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms