RNA–Protein interactions for RNA: ENST00000361724.3

PCDH11X-203, Transcript of protocadherin 11 X-linked, humanhuman

TSL 1 (best)

Gene PCDH11X, Length 4,603 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-203ENST00000361724 TNNT2P45379 298 aaPredicted RBP4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 NEUROD1Q13562 356 aa4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 PPP2R5DQ14738 602 aa4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 POTEAQ6S8J7 498 aa4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 KRT28Q7Z3Y7 464 aa4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 PNNQ9H307 717 aaKnown RBP4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 HACL1Q9UJ83 578 aa4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 KCNG4Q8TDN1 519 aa4.04□□□□□ -1.76
PCDH11X-203ENST00000361724 MBIPQ9NS73 344 aa4.04□□□□□ -1.76
PCDH11X-203ENST00000361724 SMC4Q9NTJ3 1288 aa4.04□□□□□ -1.76
PCDH11X-203ENST00000361724 HDAC5Q9UQL6 1122 aa4.04□□□□□ -1.76
PCDH11X-203ENST00000361724 MROH7-TTC4A0A0A0MT08 1334 aa4.04□□□□□ -1.76
PCDH11X-203ENST00000361724 MROH7Q68CQ1 1323 aa4.04□□□□□ -1.76
PCDH11X-203ENST00000361724 SULF1Q8IWU6 871 aa4.04□□□□□ -1.76
PCDH11X-203ENST00000361724 UIMC1Q96RL1 719 aa4.04□□□□□ -1.76
PCDH11X-203ENST00000361724 SPG7Q9UQ90 795 aa4.04□□□□□ -1.76
PCDH11X-203ENST00000361724 TGFB2P61812 414 aa4.04□□□□□ -1.76
PCDH11X-203ENST00000361724 FAM161AQ3B820 660 aa4.04□□□□□ -1.76
PCDH11X-203ENST00000361724 C1orf141Q5JVX7 400 aa4.04□□□□□ -1.76
PCDH11X-203ENST00000361724 RBM28Q9NW13 759 aaKnown RBP4.04□□□□□ -1.76
PCDH11X-203ENST00000361724 CCDC144AA2RUR9 1427 aa4.04□□□□□ -1.76
PCDH11X-203ENST00000361724 NWD1Q149M9 1564 aa4.04□□□□□ -1.76
PCDH11X-203ENST00000361724 SPC25Q9HBM1 224 aa4.04□□□□□ -1.76
PCDH11X-203ENST00000361724 NLRP2Q9NX02 1062 aa4.04□□□□□ -1.76
PCDH11X-203ENST00000361724 KIF21AQ7Z4S6 1674 aa4.04□□□□□ -1.76
PCDH11X-203ENST00000361724 TNNI2P48788 182 aa4.03□□□□□ -1.76
PCDH11X-203ENST00000361724 LDHDQ86WU2 507 aa4.03□□□□□ -1.76
PCDH11X-203ENST00000361724 TTC5Q8N0Z6 440 aa4.03□□□□□ -1.76
PCDH11X-203ENST00000361724 CDK11BP21127 795 aaKnown RBP4.03□□□□□ -1.76
PCDH11X-203ENST00000361724 KCNH6Q9H252 994 aa4.03□□□□□ -1.76
PCDH11X-203ENST00000361724 CREBZFQ9NS37 354 aa4.03□□□□□ -1.76
PCDH11X-203ENST00000361724 BSDC1Q9NW68 430 aaPredicted RBP4.03□□□□□ -1.76
PCDH11X-203ENST00000361724 MMP14P50281 582 aa4.03□□□□□ -1.76
PCDH11X-203ENST00000361724 NIM1KQ8IY84 436 aa4.03□□□□□ -1.76
PCDH11X-203ENST00000361724 MSRAQ9UJ68 235 aa4.03□□□□□ -1.76
PCDH11X-203ENST00000361724 RTCBQ9Y3I0 505 aaKnown RBP4.03□□□□□ -1.76
PCDH11X-203ENST00000361724 RAD54L2Q9Y4B4 1467 aa4.03□□□□□ -1.76
PCDH11X-203ENST00000361724 INHBEP58166 350 aa4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 FAM98CQ17RN3 349 aaKnown RBP4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 GPR161Q8N6U8 529 aaKnown RBP4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 MFSD14AQ96MC6 490 aa4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 TEX13AQ9BXU3 409 aaPredicted RBP4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 A0A1W2PPC1 479 aa4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 APBB1O00213 710 aa4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 BRDTQ58F21 947 aaPredicted RBP4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 PHF8Q9UPP1 1060 aa4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 USP47Q96K76 1375 aa4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 RIMS2Q9UQ26 1411 aa4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 B4DLN1 442 aa4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 TRIM37O94972 964 aa4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 MRPL12P52815 198 aaKnown RBP4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 FAM50AQ14320 339 aaKnown RBP4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 TRMT44Q8IYL2 757 aaKnown RBP4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 HELBQ8NG08 1087 aaPredicted RBP4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 FKTNO75072 461 aa4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 AMPHP49418 695 aa4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 PRIM1P49642 420 aaKnown RBP4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 PDE3AQ14432 1141 aa4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 SCAF11Q99590 1463 aaKnown RBP4.02□□□□□ -1.77
PCDH11X-203ENST00000361724 FSD2A1L4K1 749 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 GNRH1P01148 92 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 PUS10Q3MIT2 529 aaKnown RBP4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 MCTP2Q6DN12 878 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 ZBTB47Q9UFB7 747 aaPredicted RBP4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 COG6Q9Y2V7 657 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 MIA2Q96PC5 1412 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 DLC1Q96QB1 1528 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 KIF14Q15058 1648 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 VAMP4O75379 141 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 ZBTB7AO95365 584 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 ANP32AP39687 249 aaKnown RBP4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 TRAPPC3LQ5T215 181 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 RTKN2Q8IZC4 609 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 OGFOD1Q8N543 542 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 ZNF622Q969S3 477 aaKnown RBP eCLIP4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 TERF2IPQ9NYB0 399 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 FANCIQ9NVI1 1328 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 ZC3H14Q6PJT7 736 aaKnown RBP4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 SAGE1Q9NXZ1 904 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 CCNL1Q9UK58 526 aaPredicted RBP4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 NKTRP30414 1462 aaKnown RBP4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 PEG3Q9GZU2 1588 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 DIP2BQ9P265 1576 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 LMNB1P20700 586 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 ALDH1B1P30837 517 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 DDX1Q92499 740 aaKnown RBP4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 NBPF3Q9H094 633 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 PHTF1Q9UMS5 762 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 AMOTL2Q9Y2J4 779 aa4.01□□□□□ -1.77
PCDH11X-203ENST00000361724 AGLP35573 1532 aa4□□□□□ -1.77
PCDH11X-203ENST00000361724 TLR3O15455 904 aaKnown RBP4□□□□□ -1.77
PCDH11X-203ENST00000361724 EVI5O60447 810 aa4□□□□□ -1.77
PCDH11X-203ENST00000361724 ALADP13716 330 aa4□□□□□ -1.77
PCDH11X-203ENST00000361724 PRKG1Q13976 671 aa4□□□□□ -1.77
PCDH11X-203ENST00000361724 MAP3K11Q16584 847 aa4□□□□□ -1.77
PCDH11X-203ENST00000361724 RPGRQ92834 1020 aaKnown RBP4□□□□□ -1.77
PCDH11X-203ENST00000361724 BORCS6Q96GS4 357 aa4□□□□□ -1.77
PCDH11X-203ENST00000361724 SLC15A2Q16348 729 aa4□□□□□ -1.77
PCDH11X-203ENST00000361724 RUFY4Q6ZNE9 571 aa4□□□□□ -1.77
PCDH11X-203ENST00000361724 CCDC129Q6ZRS4 1044 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms