RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 TERF1P54274 439 aa15.52■□□□□ 0.08
VAMP1-201ENST00000361716 ATP2B3Q16720 1220 aa15.52■□□□□ 0.07
VAMP1-201ENST00000361716 LMBRD1Q9NUN5 540 aa15.52■□□□□ 0.07
VAMP1-201ENST00000361716 TMEM63CQ9P1W3 806 aa15.52■□□□□ 0.07
VAMP1-201ENST00000361716 USP25Q9UHP3 1055 aa15.52■□□□□ 0.07
VAMP1-201ENST00000361716 KIDINS220Q9ULH0 1771 aa15.51■□□□□ 0.07
VAMP1-201ENST00000361716 PRKAR2BP31323 418 aa15.51■□□□□ 0.07
VAMP1-201ENST00000361716 PDCL2Q8N4E4 241 aa15.51■□□□□ 0.07
VAMP1-201ENST00000361716 MROH1Q8NDA8 1641 aa15.51■□□□□ 0.07
VAMP1-201ENST00000361716 SLC4A10Q6U841 1118 aa15.51■□□□□ 0.07
VAMP1-201ENST00000361716 GPT2Q8TD30 523 aa15.51■□□□□ 0.07
VAMP1-201ENST00000361716 KIF3AQ9Y496 699 aa15.51■□□□□ 0.07
VAMP1-201ENST00000361716 EIF2AK4Q9P2K8 1649 aaKnown RBP15.51■□□□□ 0.07
VAMP1-201ENST00000361716 U2AF2P26368 475 aaKnown RBP eCLIP15.5■□□□□ 0.07
VAMP1-201ENST00000361716 ATP7AQ04656 1500 aa15.5■□□□□ 0.07
VAMP1-201ENST00000361716 DDIT3P35638 169 aa15.5■□□□□ 0.07
VAMP1-201ENST00000361716 ZNF445P59923 1031 aa15.5■□□□□ 0.07
VAMP1-201ENST00000361716 CHAF1AQ13111 956 aaPredicted RBP15.5■□□□□ 0.07
VAMP1-201ENST00000361716 DCTN1Q14203 1278 aa15.5■□□□□ 0.07
VAMP1-201ENST00000361716 NAP1L2Q9ULW6 460 aaPredicted RBP15.5■□□□□ 0.07
VAMP1-201ENST00000361716 DIAPH1O60610 1272 aaKnown RBP15.5■□□□□ 0.07
VAMP1-201ENST00000361716 SPC24Q8NBT2 197 aa15.5■□□□□ 0.07
VAMP1-201ENST00000361716 INSRP06213 1382 aa15.5■□□□□ 0.07
VAMP1-201ENST00000361716 UGGT1Q9NYU2 1555 aa15.49■□□□□ 0.07
VAMP1-201ENST00000361716 E9PCH4 1651 aa15.49■□□□□ 0.07
VAMP1-201ENST00000361716 TRERF1Q96PN7 1200 aa15.49■□□□□ 0.07
VAMP1-201ENST00000361716 KIF2CQ99661 725 aa15.49■□□□□ 0.07
VAMP1-201ENST00000361716 NGEFQ8N5V2 710 aa15.48■□□□□ 0.07
VAMP1-201ENST00000361716 TSPY26PQ9H489 355 aa15.48■□□□□ 0.07
VAMP1-201ENST00000361716 EVC2Q86UK5 1308 aa15.48■□□□□ 0.07
VAMP1-201ENST00000361716 AK9Q5TCS8 1911 aa15.48■□□□□ 0.07
VAMP1-201ENST00000361716 PIK3C2GO75747 1445 aa15.48■□□□□ 0.07
VAMP1-201ENST00000361716 HS1BP3Q53T59 392 aa15.48■□□□□ 0.07
VAMP1-201ENST00000361716 LRSAM1Q6UWE0 723 aa15.48■□□□□ 0.07
VAMP1-201ENST00000361716 ESF1Q9H501 851 aaKnown RBP15.48■□□□□ 0.07
VAMP1-201ENST00000361716 C16orf71Q8IYS4 520 aaPredicted RBP15.48■□□□□ 0.07
VAMP1-201ENST00000361716 CFAP74Q9C0B2 1584 aa15.47■□□□□ 0.07
VAMP1-201ENST00000361716 ATAD2Q6PL18 1390 aa15.47■□□□□ 0.07
VAMP1-201ENST00000361716 SMARCA5O60264 1052 aaPredicted RBP15.47■□□□□ 0.07
VAMP1-201ENST00000361716 CEBPAP49715 358 aaPredicted RBP15.47■□□□□ 0.07
VAMP1-201ENST00000361716 NUCB1Q02818 461 aa15.47■□□□□ 0.07
VAMP1-201ENST00000361716 NOLC1Q14978 699 aaKnown RBP eCLIP15.47■□□□□ 0.07
VAMP1-201ENST00000361716 MYRIPQ8NFW9 859 aa15.47■□□□□ 0.07
VAMP1-201ENST00000361716 NECTIN2Q92692 538 aa15.47■□□□□ 0.07
VAMP1-201ENST00000361716 MAP3K4Q9Y6R4 1608 aa15.47■□□□□ 0.07
VAMP1-201ENST00000361716 ZNF518AQ6AHZ1 1483 aa15.47■□□□□ 0.07
VAMP1-201ENST00000361716 ST18O60284 1047 aa15.46■□□□□ 0.07
VAMP1-201ENST00000361716 GTF2E1P29083 439 aaPredicted RBP15.46■□□□□ 0.07
VAMP1-201ENST00000361716 HDAC1Q13547 482 aaPredicted RBP15.46■□□□□ 0.07
VAMP1-201ENST00000361716 CDC45O75419 566 aa15.46■□□□□ 0.07
VAMP1-201ENST00000361716 TSPYL6Q8N831 410 aa15.45■□□□□ 0.06
VAMP1-201ENST00000361716 DTNBO60941 627 aa15.45■□□□□ 0.06
VAMP1-201ENST00000361716 STAC3Q96MF2 364 aa15.45■□□□□ 0.06
VAMP1-201ENST00000361716 CHMP4AQ9BY43 222 aa15.45■□□□□ 0.06
VAMP1-201ENST00000361716 PRDM15P57071 1507 aaPredicted RBP15.45■□□□□ 0.06
VAMP1-201ENST00000361716 ERICH4A6NGS2 130 aa15.45■□□□□ 0.06
VAMP1-201ENST00000361716 POGZQ7Z3K3 1410 aa15.44■□□□□ 0.06
VAMP1-201ENST00000361716 HMGN5P82970 282 aaKnown RBP15.44■□□□□ 0.06
VAMP1-201ENST00000361716 BMP2KLQ5H9B9 411 aa15.44■□□□□ 0.06
VAMP1-201ENST00000361716 ZNF710Q8N1W2 664 aa15.44■□□□□ 0.06
VAMP1-201ENST00000361716 CHMP3Q9Y3E7 222 aa15.44■□□□□ 0.06
VAMP1-201ENST00000361716 PDLIM2Q96JY6 352 aa15.44■□□□□ 0.06
VAMP1-201ENST00000361716 BCL2L12Q9HB09 334 aa15.44■□□□□ 0.06
VAMP1-201ENST00000361716 TRPM1Q7Z4N2 1603 aa15.44■□□□□ 0.06
VAMP1-201ENST00000361716 FAM83GA6ND36 823 aa15.43■□□□□ 0.06
VAMP1-201ENST00000361716 RABEP1Q15276 862 aa15.43■□□□□ 0.06
VAMP1-201ENST00000361716 TSHZ3Q63HK5 1081 aa15.43■□□□□ 0.06
VAMP1-201ENST00000361716 CABP1Q9NZU7 370 aa15.43■□□□□ 0.06
VAMP1-201ENST00000361716 HDGFL2Q7Z4V5 671 aaPredicted RBP15.43■□□□□ 0.06
VAMP1-201ENST00000361716 TET3O43151 1660 aa15.43■□□□□ 0.06
VAMP1-201ENST00000361716 NOS1P29475 1434 aa15.43■□□□□ 0.06
VAMP1-201ENST00000361716 MCM5P33992 734 aa15.43■□□□□ 0.06
VAMP1-201ENST00000361716 NEK4P51957 841 aa15.43■□□□□ 0.06
VAMP1-201ENST00000361716 UTP14CQ5TAP6 766 aaKnown RBP15.43■□□□□ 0.06
VAMP1-201ENST00000361716 ZNF592Q92610 1267 aa15.43■□□□□ 0.06
VAMP1-201ENST00000361716 PRAM1Q96QH2 718 aa15.43■□□□□ 0.06
VAMP1-201ENST00000361716 TERF2IPQ9NYB0 399 aa15.43■□□□□ 0.06
VAMP1-201ENST00000361716 RNF17Q9BXT8 1623 aaKnown RBP15.42■□□□□ 0.06
VAMP1-201ENST00000361716 KCNJ4P48050 445 aa15.42■□□□□ 0.06
VAMP1-201ENST00000361716 GTPBP4Q9BZE4 634 aaKnown RBP15.42■□□□□ 0.06
VAMP1-201ENST00000361716 FRMPD1Q5SYB0 1578 aa15.42■□□□□ 0.06
VAMP1-201ENST00000361716 CEP152O94986 1710 aa15.42■□□□□ 0.06
VAMP1-201ENST00000361716 SPHKAPQ2M3C7 1700 aa15.42■□□□□ 0.06
VAMP1-201ENST00000361716 ADCY5O95622 1261 aa15.42■□□□□ 0.06
VAMP1-201ENST00000361716 DRC7Q8IY82 874 aa15.42■□□□□ 0.06
VAMP1-201ENST00000361716 ZBTB40Q9NUA8 1239 aa15.42■□□□□ 0.06
VAMP1-201ENST00000361716 TRIM6-TRIM34B2RNG4 842 aa15.41■□□□□ 0.06
VAMP1-201ENST00000361716 LETM1O95202 739 aaPredicted RBP15.41■□□□□ 0.06
VAMP1-201ENST00000361716 GLI2P10070 1586 aa15.41■□□□□ 0.06
VAMP1-201ENST00000361716 HCLS1P14317 486 aaPredicted RBP15.41■□□□□ 0.06
VAMP1-201ENST00000361716 CASC1Q6TDU7 716 aa15.41■□□□□ 0.06
VAMP1-201ENST00000361716 SYAP1Q96A49 352 aaPredicted RBP15.41■□□□□ 0.06
VAMP1-201ENST00000361716 TRIM35Q9UPQ4 493 aa15.41■□□□□ 0.06
VAMP1-201ENST00000361716 OTUD7AQ8TE49 926 aaPredicted RBP15.4■□□□□ 0.06
VAMP1-201ENST00000361716 RILPL2Q969X0 211 aa15.4■□□□□ 0.06
VAMP1-201ENST00000361716 POLR3AO14802 1390 aaPredicted RBP15.4■□□□□ 0.06
VAMP1-201ENST00000361716 NPHP1O15259 732 aa15.4■□□□□ 0.06
VAMP1-201ENST00000361716 IDI1Q13907 227 aa15.4■□□□□ 0.06
VAMP1-201ENST00000361716 KRT24Q2M2I5 525 aa15.4■□□□□ 0.06
VAMP1-201ENST00000361716 LAMC1P11047 1609 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms