RNA–Protein interactions for RNA: ENST00000361391.10

CTNND1-203, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-203ENST00000361391 SMARCE1Q969G3 411 aa9.58□□□□□ -0.88
CTNND1-203ENST00000361391 ZNF396Q96N95 335 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-203ENST00000361391 IGF1RP08069 1367 aa9.58□□□□□ -0.88
CTNND1-203ENST00000361391 MAP3K9P80192 1104 aa9.58□□□□□ -0.88
CTNND1-203ENST00000361391 RABEP1Q15276 862 aa9.58□□□□□ -0.88
CTNND1-203ENST00000361391 CDK19Q9BWU1 502 aa9.58□□□□□ -0.88
CTNND1-203ENST00000361391 CYP46A1Q9Y6A2 500 aa9.58□□□□□ -0.88
CTNND1-203ENST00000361391 CABP1Q9NZU7 370 aa9.58□□□□□ -0.88
CTNND1-203ENST00000361391 NCOA2Q15596 1464 aa9.58□□□□□ -0.88
CTNND1-203ENST00000361391 AACSQ86V21 672 aa9.58□□□□□ -0.88
CTNND1-203ENST00000361391 LRRC9Q6ZRR7 1453 aa9.57□□□□□ -0.88
CTNND1-203ENST00000361391 CCDC69A6NI79 296 aa9.57□□□□□ -0.88
CTNND1-203ENST00000361391 PLEKHO1Q53GL0 409 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-203ENST00000361391 TSPYL1Q9H0U9 437 aa9.57□□□□□ -0.88
CTNND1-203ENST00000361391 K7ELQ4 463 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-203ENST00000361391 CABP4P57796 275 aa9.57□□□□□ -0.88
CTNND1-203ENST00000361391 CENPHQ9H3R5 247 aa9.57□□□□□ -0.88
CTNND1-203ENST00000361391 NUTM1Q86Y26 1132 aa9.57□□□□□ -0.88
CTNND1-203ENST00000361391 CAMK4Q16566 473 aa9.57□□□□□ -0.88
CTNND1-203ENST00000361391 AQRO60306 1485 aaKnown RBP eCLIP9.57□□□□□ -0.882e-9■■■□□ 18.1
CTNND1-203ENST00000361391 TXLNAP40222 546 aa9.57□□□□□ -0.88
CTNND1-203ENST00000361391 MBD3O95983 291 aa9.56□□□□□ -0.88
CTNND1-203ENST00000361391 RBM5P52756 815 aaKnown RBP eCLIP9.56□□□□□ -0.88
CTNND1-203ENST00000361391 MAPK8IP2Q13387 824 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-203ENST00000361391 SYCP1Q15431 976 aa9.56□□□□□ -0.88
CTNND1-203ENST00000361391 TMEM87AQ8NBN3 555 aa9.56□□□□□ -0.88
CTNND1-203ENST00000361391 GCC1Q96CN9 775 aa9.56□□□□□ -0.88
CTNND1-203ENST00000361391 SEPT11Q9NVA2 429 aaKnown RBP9.56□□□□□ -0.88
CTNND1-203ENST00000361391 GPRASP1Q5JY77 1395 aa9.56□□□□□ -0.88
CTNND1-203ENST00000361391 BICDL1Q6ZP65 573 aa9.56□□□□□ -0.88
CTNND1-203ENST00000361391 JAKMIP1Q96N16 626 aaKnown RBP9.56□□□□□ -0.88
CTNND1-203ENST00000361391 ANKRD62A6NC57 917 aa9.56□□□□□ -0.88
CTNND1-203ENST00000361391 SMARCA5O60264 1052 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-203ENST00000361391 DDX11Q96FC9 970 aa9.56□□□□□ -0.88
CTNND1-203ENST00000361391 DEF6Q9H4E7 631 aa9.56□□□□□ -0.88
CTNND1-203ENST00000361391 GRPEL1Q9HAV7 217 aa9.56□□□□□ -0.88
CTNND1-203ENST00000361391 SMG6Q86US8 1419 aaKnown RBP9.56□□□□□ -0.88
CTNND1-203ENST00000361391 SLC3A2P08195 630 aaKnown RBP9.55□□□□□ -0.88
CTNND1-203ENST00000361391 CHD1LQ86WJ1 897 aa9.55□□□□□ -0.88
CTNND1-203ENST00000361391 UQCRHLA0A096LP55 91 aa9.55□□□□□ -0.88
CTNND1-203ENST00000361391 UQCRHP07919 91 aa9.55□□□□□ -0.88
CTNND1-203ENST00000361391 NBPF8Q3BBV2 869 aa9.55□□□□□ -0.88
CTNND1-203ENST00000361391 LARP1BQ659C4 914 aaKnown RBP9.55□□□□□ -0.88
CTNND1-203ENST00000361391 ERC1Q8IUD2 1116 aa9.55□□□□□ -0.88
CTNND1-203ENST00000361391 HIP1O00291 1037 aa9.55□□□□□ -0.88
CTNND1-203ENST00000361391 SSBP05455 408 aaKnown RBP eCLIP9.55□□□□□ -0.881e-7■■■■■ 26.8
CTNND1-203ENST00000361391 NEFHP12036 1026 aa9.55□□□□□ -0.88
CTNND1-203ENST00000361391 WWC2Q6AWC2 1192 aa9.55□□□□□ -0.88
CTNND1-203ENST00000361391 OSCARQ8IYS5 282 aa9.55□□□□□ -0.88
CTNND1-203ENST00000361391 CCDC192P0DO97 292 aa9.55□□□□□ -0.88
CTNND1-203ENST00000361391 PDRG1Q9NUG6 133 aa9.55□□□□□ -0.88
CTNND1-203ENST00000361391 TOM1L2Q6ZVM7 507 aa9.54□□□□□ -0.88
CTNND1-203ENST00000361391 ERCC4Q92889 916 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-203ENST00000361391 CFTRP13569 1480 aa9.54□□□□□ -0.88
CTNND1-203ENST00000361391 TATP17735 454 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-203ENST00000361391 ZNF530Q6P9A1 599 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-203ENST00000361391 PPFIBP1Q86W92 1011 aa9.54□□□□□ -0.88
CTNND1-203ENST00000361391 SYNJ1O43426 1573 aa9.54□□□□□ -0.88
CTNND1-203ENST00000361391 CT47B1P0C2W7 299 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-203ENST00000361391 CHMP4BP1P59074 171 aa9.54□□□□□ -0.88
CTNND1-203ENST00000361391 C16orf71Q8IYS4 520 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-203ENST00000361391 SPATA32Q96LK8 384 aa9.54□□□□□ -0.88
CTNND1-203ENST00000361391 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.54□□□□□ -0.881e-7■■■□□ 16.3
CTNND1-203ENST00000361391 SRGAP3O43295 1099 aa9.54□□□□□ -0.88
CTNND1-203ENST00000361391 MVPQ14764 893 aaKnown RBP9.54□□□□□ -0.88
CTNND1-203ENST00000361391 THUMPD2Q9BTF0 503 aaKnown RBP9.54□□□□□ -0.88
CTNND1-203ENST00000361391 ERICH4A6NGS2 130 aa9.54□□□□□ -0.88
CTNND1-203ENST00000361391 HSP90AB3PQ58FF7 597 aa9.54□□□□□ -0.88
CTNND1-203ENST00000361391 CCDC181Q5TID7 509 aa9.54□□□□□ -0.88
CTNND1-203ENST00000361391 LEKR1Q6ZMV7 388 aa9.54□□□□□ -0.88
CTNND1-203ENST00000361391 PDCL3Q9H2J4 239 aa9.54□□□□□ -0.88
CTNND1-203ENST00000361391 TMX1Q9H3N1 280 aa9.54□□□□□ -0.88
CTNND1-203ENST00000361391 CWC15Q9P013 229 aaKnown RBP9.54□□□□□ -0.88
CTNND1-203ENST00000361391 RRBP1Q9P2E9 1410 aaKnown RBP9.53□□□□□ -0.88
CTNND1-203ENST00000361391 PDCP20941 246 aa9.53□□□□□ -0.88
CTNND1-203ENST00000361391 PROSER2Q86WR7 435 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-203ENST00000361391 BACH2Q9BYV9 841 aa9.53□□□□□ -0.88
CTNND1-203ENST00000361391 SRCIN1Q9C0H9 1055 aa9.53□□□□□ -0.88
CTNND1-203ENST00000361391 FYCO1Q9BQS8 1478 aa9.53□□□□□ -0.88
CTNND1-203ENST00000361391 RDXP35241 583 aaKnown RBP9.53□□□□□ -0.88
CTNND1-203ENST00000361391 DCTN1Q14203 1278 aa9.53□□□□□ -0.88
CTNND1-203ENST00000361391 BTBD11A6QL63 1104 aa9.53□□□□□ -0.88
CTNND1-203ENST00000361391 TAX1BP1Q86VP1 789 aa9.53□□□□□ -0.88
CTNND1-203ENST00000361391 CCDC191Q8NCU4 936 aa9.53□□□□□ -0.88
CTNND1-203ENST00000361391 CASTP20810 708 aaKnown RBP9.53□□□□□ -0.88
CTNND1-203ENST00000361391 ENOX2Q16206 610 aaKnown RBP9.53□□□□□ -0.88
CTNND1-203ENST00000361391 LARP6Q9BRS8 491 aaKnown RBP9.53□□□□□ -0.88
CTNND1-203ENST00000361391 ZNHIT6Q9NWK9 470 aaKnown RBP9.53□□□□□ -0.88
CTNND1-203ENST00000361391 CCT4P50991 539 aaKnown RBP9.52□□□□□ -0.88
CTNND1-203ENST00000361391 ATF7IPQ6VMQ6 1270 aa9.52□□□□□ -0.88
CTNND1-203ENST00000361391 FILIP1Q7Z7B0 1213 aa9.52□□□□□ -0.88
CTNND1-203ENST00000361391 SYCE3A1L190 88 aa9.52□□□□□ -0.89
CTNND1-203ENST00000361391 TDO2P48775 406 aa9.52□□□□□ -0.89
CTNND1-203ENST00000361391 MCM2P49736 904 aa9.52□□□□□ -0.89
CTNND1-203ENST00000361391 MYO6Q9UM54 1294 aa9.52□□□□□ -0.89
CTNND1-203ENST00000361391 AAMPQ13685 434 aa9.52□□□□□ -0.89
CTNND1-203ENST00000361391 CCDC57Q2TAC2 916 aa9.52□□□□□ -0.89
CTNND1-203ENST00000361391 WDR33Q9C0J8 1336 aaKnown RBP9.52□□□□□ -0.89
CTNND1-203ENST00000361391 AEBP1Q8IUX7 1158 aa9.52□□□□□ -0.89
CTNND1-203ENST00000361391 TRIM22Q8IYM9 498 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms