RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 LMOD1P29536 600 aaPredicted RBP9.89□□□□□ -0.83
CLCN3-202ENST00000360642 NUDT18Q6ZVK8 323 aa9.89□□□□□ -0.83
CLCN3-202ENST00000360642 PLCH2O75038 1416 aa9.89□□□□□ -0.83
CLCN3-202ENST00000360642 MAGI2Q86UL8 1455 aa9.89□□□□□ -0.83
CLCN3-202ENST00000360642 ERICH6BQ5W0A0 696 aa9.89□□□□□ -0.83
CLCN3-202ENST00000360642 ZNF710Q8N1W2 664 aa9.89□□□□□ -0.83
CLCN3-202ENST00000360642 UCN2Q96RP3 112 aa9.89□□□□□ -0.83
CLCN3-202ENST00000360642 PRAG1Q86YV5 1406 aa9.89□□□□□ -0.83
CLCN3-202ENST00000360642 TRPM1Q7Z4N2 1603 aa9.89□□□□□ -0.83
CLCN3-202ENST00000360642 IRX6P78412 446 aaPredicted RBP9.88□□□□□ -0.83
CLCN3-202ENST00000360642 NUTM1Q86Y26 1132 aa9.88□□□□□ -0.83
CLCN3-202ENST00000360642 CCDC144AA2RUR9 1427 aa9.88□□□□□ -0.83
CLCN3-202ENST00000360642 DUOX2Q9NRD8 1548 aa9.88□□□□□ -0.83
CLCN3-202ENST00000360642 ATP10AO60312 1499 aa9.88□□□□□ -0.83
CLCN3-202ENST00000360642 ZCCHC11Q5TAX3 1644 aaKnown RBP9.88□□□□□ -0.83
CLCN3-202ENST00000360642 POLR3GLQ9BT43 218 aa9.88□□□□□ -0.83
CLCN3-202ENST00000360642 ST20-MTHFSA0A0A6YYL1 179 aa9.88□□□□□ -0.83
CLCN3-202ENST00000360642 PCDHGC3Q9UN70 934 aa9.88□□□□□ -0.83
CLCN3-202ENST00000360642 ERBINQ96RT1 1412 aa9.87□□□□□ -0.83
CLCN3-202ENST00000360642 RDH13Q8NBN7 331 aa9.87□□□□□ -0.83
CLCN3-202ENST00000360642 E9PCH4 1651 aa9.87□□□□□ -0.83
CLCN3-202ENST00000360642 FOSBP53539 338 aa9.87□□□□□ -0.83
CLCN3-202ENST00000360642 MYT1Q01538 1121 aa9.87□□□□□ -0.83
CLCN3-202ENST00000360642 L3MBTL3Q96JM7 780 aaPredicted RBP9.87□□□□□ -0.83
CLCN3-202ENST00000360642 EPAS1Q99814 870 aa9.87□□□□□ -0.83
CLCN3-202ENST00000360642 GPRASP1Q5JY77 1395 aa9.87□□□□□ -0.83
CLCN3-202ENST00000360642 CD46P15529 392 aa9.86□□□□□ -0.83
CLCN3-202ENST00000360642 PROX2Q3B8N5 592 aa9.86□□□□□ -0.83
CLCN3-202ENST00000360642 ARSIQ5FYB1 569 aa9.86□□□□□ -0.83
CLCN3-202ENST00000360642 PPP2R2DQ66LE6 453 aa9.86□□□□□ -0.83
CLCN3-202ENST00000360642 MYT1LQ9UL68 1186 aa9.86□□□□□ -0.83
CLCN3-202ENST00000360642 TRIM34Q9BYJ4 488 aa9.86□□□□□ -0.83
CLCN3-202ENST00000360642 A2MP01023 1474 aa9.86□□□□□ -0.83
CLCN3-202ENST00000360642 LAMC1P11047 1609 aa9.85□□□□□ -0.83
CLCN3-202ENST00000360642 ABCC1P33527 1531 aa9.85□□□□□ -0.83
CLCN3-202ENST00000360642 PALM3A6NDB9 673 aaPredicted RBP9.85□□□□□ -0.83
CLCN3-202ENST00000360642 TFIP11Q9UBB9 837 aaKnown RBP9.85□□□□□ -0.83
CLCN3-202ENST00000360642 KTN1Q86UP2 1357 aaKnown RBP9.85□□□□□ -0.83
CLCN3-202ENST00000360642 PBXIP1Q96AQ6 731 aa9.84□□□□□ -0.83
CLCN3-202ENST00000360642 PRSS12P56730 875 aa9.84□□□□□ -0.83
CLCN3-202ENST00000360642 PNISRQ8TF01 805 aaKnown RBP9.84□□□□□ -0.83
CLCN3-202ENST00000360642 ZDHHC16Q969W1 377 aa9.84□□□□□ -0.83
CLCN3-202ENST00000360642 LILRB3O75022 631 aa9.84□□□□□ -0.83
CLCN3-202ENST00000360642 EFCAB2Q5VUJ9 269 aa9.84□□□□□ -0.83
CLCN3-202ENST00000360642 SMG6Q86US8 1419 aaKnown RBP9.83□□□□□ -0.84
CLCN3-202ENST00000360642 ARAP3Q8WWN8 1544 aa9.83□□□□□ -0.84
CLCN3-202ENST00000360642 TMEM259Q4ZIN3 620 aa9.83□□□□□ -0.84
CLCN3-202ENST00000360642 PRR7Q8TB68 274 aa9.83□□□□□ -0.84
CLCN3-202ENST00000360642 PPP1R12CQ9BZL4 782 aa9.83□□□□□ -0.84
CLCN3-202ENST00000360642 PRDM15P57071 1507 aaPredicted RBP9.83□□□□□ -0.84
CLCN3-202ENST00000360642 TRAPPC8Q9Y2L5 1435 aa9.83□□□□□ -0.84
CLCN3-202ENST00000360642 BANK1Q8NDB2 785 aa9.82□□□□□ -0.84
CLCN3-202ENST00000360642 NBPF1Q3BBV0 1214 aa9.82□□□□□ -0.84
CLCN3-202ENST00000360642 IER5LQ5T953 404 aa9.82□□□□□ -0.84
CLCN3-202ENST00000360642 RBM46Q8TBY0 533 aaKnown RBP9.82□□□□□ -0.84
CLCN3-202ENST00000360642 RBM19Q9Y4C8 960 aaKnown RBP9.82□□□□□ -0.84
CLCN3-202ENST00000360642 LRPPRCP42704 1394 aaKnown RBP9.82□□□□□ -0.84
CLCN3-202ENST00000360642 RALBP1Q15311 655 aa9.82□□□□□ -0.84
CLCN3-202ENST00000360642 PPP4R2Q9NY27 417 aa9.82□□□□□ -0.84
CLCN3-202ENST00000360642 RTEL1-TNFRSF6BF6WH68 1400 aa9.82□□□□□ -0.84
CLCN3-202ENST00000360642 KDM4FA0A1W2PPD8 638 aa9.81□□□□□ -0.84
CLCN3-202ENST00000360642 SPTLC1O15269 473 aa9.81□□□□□ -0.84
CLCN3-202ENST00000360642 PER1O15534 1290 aaPredicted RBP9.81□□□□□ -0.84
CLCN3-202ENST00000360642 EIF2AK4Q9P2K8 1649 aaKnown RBP9.81□□□□□ -0.84
CLCN3-202ENST00000360642 BRD4O60885 1362 aaPredicted RBP9.81□□□□□ -0.84
CLCN3-202ENST00000360642 RGL3Q3MIN7 710 aa9.81□□□□□ -0.84
CLCN3-202ENST00000360642 MYBBP1AQ9BQG0 1328 aaKnown RBP9.8□□□□□ -0.84
CLCN3-202ENST00000360642 SRPK2P78362 688 aaKnown RBP9.8□□□□□ -0.84
CLCN3-202ENST00000360642 TESK2Q96S53 571 aa9.8□□□□□ -0.84
CLCN3-202ENST00000360642 COL17A1Q9UMD9 1497 aaPredicted RBP9.8□□□□□ -0.84
CLCN3-202ENST00000360642 PIK3CDO00329 1044 aa9.8□□□□□ -0.84
CLCN3-202ENST00000360642 DEPDC4Q8N2C3 294 aa9.8□□□□□ -0.84
CLCN3-202ENST00000360642 EYA1Q99502 592 aa9.8□□□□□ -0.84
CLCN3-202ENST00000360642 PNMA3Q9UL41 463 aa9.8□□□□□ -0.84
CLCN3-202ENST00000360642 RNF123Q5XPI4 1314 aa9.8□□□□□ -0.84
CLCN3-202ENST00000360642 TTC13Q8NBP0 860 aa9.79□□□□□ -0.84
CLCN3-202ENST00000360642 TMC1Q8TDI8 760 aa9.79□□□□□ -0.84
CLCN3-202ENST00000360642 METRNQ9UJH8 293 aa9.79□□□□□ -0.84
CLCN3-202ENST00000360642 ZFYVE16Q7Z3T8 1539 aa9.79□□□□□ -0.84
CLCN3-202ENST00000360642 NUDCQ9Y266 331 aa9.79□□□□□ -0.84
CLCN3-202ENST00000360642 PARD3Q8TEW0 1356 aa9.79□□□□□ -0.84
CLCN3-202ENST00000360642 RNF17Q9BXT8 1623 aaKnown RBP9.79□□□□□ -0.84
CLCN3-202ENST00000360642 CFAP99D6REC4 459 aa9.78□□□□□ -0.84
CLCN3-202ENST00000360642 LGR5O75473 907 aa9.78□□□□□ -0.84
CLCN3-202ENST00000360642 CCDC27Q2M243 656 aa9.78□□□□□ -0.84
CLCN3-202ENST00000360642 TBC1D9Q6ZT07 1266 aa9.78□□□□□ -0.84
CLCN3-202ENST00000360642 STK32AQ8WU08 396 aa9.78□□□□□ -0.84
CLCN3-202ENST00000360642 DEPDC5O75140 1603 aa9.78□□□□□ -0.84
CLCN3-202ENST00000360642 KDM4AO75164 1064 aa9.78□□□□□ -0.84
CLCN3-202ENST00000360642 SEPT9Q9UHD8 586 aaPredicted RBP9.78□□□□□ -0.84
CLCN3-202ENST00000360642 SLC34A2O95436 690 aa9.77□□□□□ -0.84
CLCN3-202ENST00000360642 NR6A1Q15406 480 aa9.77□□□□□ -0.84
CLCN3-202ENST00000360642 PTPRTO14522 1441 aa9.77□□□□□ -0.85
CLCN3-202ENST00000360642 DISP3Q9P2K9 1392 aa9.77□□□□□ -0.85
CLCN3-202ENST00000360642 SPAG9O60271 1321 aaKnown RBP9.77□□□□□ -0.85
CLCN3-202ENST00000360642 WASHC2CQ9Y4E1 1318 aa9.77□□□□□ -0.85
CLCN3-202ENST00000360642 UNCXA6NJT0 531 aa9.77□□□□□ -0.85
CLCN3-202ENST00000360642 ABCA9Q8IUA7 1624 aa9.77□□□□□ -0.85
CLCN3-202ENST00000360642 TRPM2O94759 1503 aa9.77□□□□□ -0.85
CLCN3-202ENST00000360642 CSB-PGBD3P0DP91 1061 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms