RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 TATP17735 454 aaPredicted RBP12.14□□□□□ -0.47
SIN3A-201ENST00000360439 SMAP1Q8IYB5 467 aaPredicted RBP12.14□□□□□ -0.47
SIN3A-201ENST00000360439 RRAGDQ9NQL2 400 aaPredicted RBP12.14□□□□□ -0.47
SIN3A-201ENST00000360439 ZBTB9Q96C00 473 aa12.14□□□□□ -0.47
SIN3A-201ENST00000360439 RIPK4P57078 832 aa12.13□□□□□ -0.47
SIN3A-201ENST00000360439 SLFN5Q08AF3 891 aa12.13□□□□□ -0.47
SIN3A-201ENST00000360439 ZKSCAN2Q63HK3 967 aa12.13□□□□□ -0.47
SIN3A-201ENST00000360439 TRIM6-TRIM34B2RNG4 842 aa12.13□□□□□ -0.47
SIN3A-201ENST00000360439 IGSF3O75054 1194 aa12.13□□□□□ -0.47
SIN3A-201ENST00000360439 CT47B1P0C2W7 299 aaPredicted RBP12.13□□□□□ -0.47
SIN3A-201ENST00000360439 PLCB2Q00722 1185 aa12.13□□□□□ -0.47
SIN3A-201ENST00000360439 ZNF830Q96NB3 372 aaPredicted RBP12.13□□□□□ -0.47
SIN3A-201ENST00000360439 TRIM34Q9BYJ4 488 aa12.13□□□□□ -0.47
SIN3A-201ENST00000360439 ASXL1Q8IXJ9 1541 aa12.13□□□□□ -0.47
SIN3A-201ENST00000360439 NECTIN2Q92692 538 aa12.13□□□□□ -0.47
SIN3A-201ENST00000360439 DISP3Q9P2K9 1392 aa12.13□□□□□ -0.47
SIN3A-201ENST00000360439 UQCRHLA0A096LP55 91 aa12.13□□□□□ -0.47
SIN3A-201ENST00000360439 UQCRHP07919 91 aa12.13□□□□□ -0.47
SIN3A-201ENST00000360439 KCNH5Q8NCM2 988 aa12.13□□□□□ -0.47
SIN3A-201ENST00000360439 ERICH4A6NGS2 130 aa12.12□□□□□ -0.47
SIN3A-201ENST00000360439 ARID4AP29374 1257 aaPredicted RBP12.12□□□□□ -0.47
SIN3A-201ENST00000360439 TBX22Q9Y458 520 aa12.12□□□□□ -0.47
SIN3A-201ENST00000360439 SMC4Q9NTJ3 1288 aa12.11□□□□□ -0.47
SIN3A-201ENST00000360439 PIK3C2GO75747 1445 aa12.11□□□□□ -0.47
SIN3A-201ENST00000360439 GOLIM4O00461 696 aa12.11□□□□□ -0.47
SIN3A-201ENST00000360439 PLEKHO1Q53GL0 409 aaPredicted RBP12.11□□□□□ -0.47
SIN3A-201ENST00000360439 NME9Q86XW9 330 aa12.11□□□□□ -0.47
SIN3A-201ENST00000360439 ITPRIPQ8IWB1 547 aa12.11□□□□□ -0.47
SIN3A-201ENST00000360439 MAST1Q9Y2H9 1570 aa12.11□□□□□ -0.47
SIN3A-201ENST00000360439 MYO5CQ9NQX4 1742 aa12.11□□□□□ -0.47
SIN3A-201ENST00000360439 DDX19BQ9UMR2 479 aa12.11□□□□□ -0.47
SIN3A-201ENST00000360439 TTC37Q6PGP7 1564 aa12.11□□□□□ -0.47
SIN3A-201ENST00000360439 SULT6B1Q6IMI4 303 aa12.1□□□□□ -0.47
SIN3A-201ENST00000360439 WDR63Q8IWG1 891 aa12.1□□□□□ -0.47
SIN3A-201ENST00000360439 SSR1P43307 286 aaKnown RBP12.1□□□□□ -0.47
SIN3A-201ENST00000360439 RBM42Q9BTD8 480 aaKnown RBP12.1□□□□□ -0.47
SIN3A-201ENST00000360439 CFAP74Q9C0B2 1584 aa12.1□□□□□ -0.47
SIN3A-201ENST00000360439 APBB1O00213 710 aa12.1□□□□□ -0.47
SIN3A-201ENST00000360439 GTF2A1P52655 376 aaPredicted RBP12.1□□□□□ -0.47
SIN3A-201ENST00000360439 CFAP65Q6ZU64 1925 aaKnown RBP12.1□□□□□ -0.47
SIN3A-201ENST00000360439 NPHP3Q7Z494 1330 aa12.09□□□□□ -0.47
SIN3A-201ENST00000360439 NPC1L1Q9UHC9 1359 aa12.09□□□□□ -0.47
SIN3A-201ENST00000360439 ACEP12821 1306 aa12.09□□□□□ -0.47
SIN3A-201ENST00000360439 LTKP29376 864 aa12.09□□□□□ -0.47
SIN3A-201ENST00000360439 C8orf37Q96NL8 207 aa12.09□□□□□ -0.47
SIN3A-201ENST00000360439 COG6Q9Y2V7 657 aa12.09□□□□□ -0.47
SIN3A-201ENST00000360439 CHRNA2Q15822 529 aa12.09□□□□□ -0.47
SIN3A-201ENST00000360439 SKOR2Q2VWA4 1001 aaPredicted RBP12.08□□□□□ -0.47
SIN3A-201ENST00000360439 MAGI2Q86UL8 1455 aa12.08□□□□□ -0.48
SIN3A-201ENST00000360439 TOMM22Q9NS69 142 aa12.08□□□□□ -0.48
SIN3A-201ENST00000360439 LETM1O95202 739 aaPredicted RBP12.08□□□□□ -0.48
SIN3A-201ENST00000360439 PRKAR2BP31323 418 aa12.07□□□□□ -0.48
SIN3A-201ENST00000360439 CLCN1P35523 988 aa12.07□□□□□ -0.48
SIN3A-201ENST00000360439 DUSP27Q5VZP5 1158 aa12.07□□□□□ -0.48
SIN3A-201ENST00000360439 G3V3G9 751 aa12.07□□□□□ -0.48
SIN3A-201ENST00000360439 DCAF8Q5TAQ9 597 aa12.07□□□□□ -0.48
SIN3A-201ENST00000360439 TSPYL4Q9UJ04 414 aa12.07□□□□□ -0.48
SIN3A-201ENST00000360439 KIAA2012Q0VF49 1180 aa12.07□□□□□ -0.48
SIN3A-201ENST00000360439 DZIP1LQ8IYY4 767 aaKnown RBP12.07□□□□□ -0.48
SIN3A-201ENST00000360439 ZNF530Q6P9A1 599 aaPredicted RBP12.07□□□□□ -0.48
SIN3A-201ENST00000360439 KIF16BQ96L93 1317 aa12.07□□□□□ -0.48
SIN3A-201ENST00000360439 CHMP5Q9NZZ3 219 aa12.06□□□□□ -0.48
SIN3A-201ENST00000360439 TDO2P48775 406 aa12.06□□□□□ -0.48
SIN3A-201ENST00000360439 CABLES1Q8TDN4 633 aa12.06□□□□□ -0.48
SIN3A-201ENST00000360439 MFAP1P55081 439 aaKnown RBP12.06□□□□□ -0.48
SIN3A-201ENST00000360439 PIK3R5Q8WYR1 880 aa12.06□□□□□ -0.48
SIN3A-201ENST00000360439 CHMP4CQ96CF2 233 aa12.06□□□□□ -0.48
SIN3A-201ENST00000360439 BCL2L13Q9BXK5 485 aa12.06□□□□□ -0.48
SIN3A-201ENST00000360439 SPG7Q9UQ90 795 aa12.06□□□□□ -0.48
SIN3A-201ENST00000360439 MLH3Q9UHC1 1453 aa12.05□□□□□ -0.48
SIN3A-201ENST00000360439 LAMC1P11047 1609 aa12.05□□□□□ -0.48
SIN3A-201ENST00000360439 GAS2L2Q8NHY3 880 aa12.05□□□□□ -0.48
SIN3A-201ENST00000360439 PPP1R1BQ9UD71 204 aaPredicted RBP12.05□□□□□ -0.48
SIN3A-201ENST00000360439 TMEM2Q9UHN6 1383 aa12.05□□□□□ -0.48
SIN3A-201ENST00000360439 TICAM2Q86XR7 235 aa12.05□□□□□ -0.48
SIN3A-201ENST00000360439 NSD3Q9BZ95 1437 aa12.05□□□□□ -0.48
SIN3A-201ENST00000360439 PRDM15P57071 1507 aaPredicted RBP12.05□□□□□ -0.48
SIN3A-201ENST00000360439 PER1O15534 1290 aaPredicted RBP12.04□□□□□ -0.48
SIN3A-201ENST00000360439 NSD2O96028 1365 aa12.04□□□□□ -0.48
SIN3A-201ENST00000360439 CABP4P57796 275 aa12.04□□□□□ -0.48
SIN3A-201ENST00000360439 TMED8Q6PL24 325 aaPredicted RBP12.04□□□□□ -0.48
SIN3A-201ENST00000360439 LRRC59Q96AG4 307 aaKnown RBP12.04□□□□□ -0.48
SIN3A-201ENST00000360439 PREX2Q70Z35 1606 aa12.04□□□□□ -0.48
SIN3A-201ENST00000360439 TESK2Q96S53 571 aa12.04□□□□□ -0.48
SIN3A-201ENST00000360439 USHBP1Q8N6Y0 703 aa12.04□□□□□ -0.48
SIN3A-201ENST00000360439 BCORL1Q5H9F3 1711 aa12.03□□□□□ -0.48
SIN3A-201ENST00000360439 MPNDQ8N594 471 aa12.03□□□□□ -0.48
SIN3A-201ENST00000360439 ISY1Q9ULR0 285 aaKnown RBP12.03□□□□□ -0.48
SIN3A-201ENST00000360439 MPHOSPH10O00566 681 aaKnown RBP12.03□□□□□ -0.48
SIN3A-201ENST00000360439 SYNMO15061 1565 aa12.03□□□□□ -0.48
SIN3A-201ENST00000360439 AIMP1Q12904 312 aaKnown RBP12.03□□□□□ -0.48
SIN3A-201ENST00000360439 SLAIN2Q9P270 581 aa12.03□□□□□ -0.48
SIN3A-201ENST00000360439 NPATQ14207 1427 aa12.03□□□□□ -0.48
SIN3A-201ENST00000360439 KIF20AO95235 890 aa12.02□□□□□ -0.48
SIN3A-201ENST00000360439 ORAI2Q96SN7 254 aa12.02□□□□□ -0.48
SIN3A-201ENST00000360439 DEF6Q9H4E7 631 aa12.02□□□□□ -0.48
SIN3A-201ENST00000360439 SAMD9LQ8IVG5 1584 aa12.02□□□□□ -0.48
SIN3A-201ENST00000360439 NEXNQ0ZGT2 675 aa12.02□□□□□ -0.49
SIN3A-201ENST00000360439 SPDYE4A6NLX3 237 aa12.02□□□□□ -0.49
SIN3A-201ENST00000360439 TIGD1Q96MW7 591 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms