RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 VPS72Q15906 364 aa9.45□□□□□ -0.9
CCDC196-201ENST00000359454 TMEM132EQ6IEE7 984 aa9.45□□□□□ -0.9
CCDC196-201ENST00000359454 SEPT12Q8IYM1 358 aa9.45□□□□□ -0.9
CCDC196-201ENST00000359454 SIRT1Q96EB6 747 aa9.45□□□□□ -0.9
CCDC196-201ENST00000359454 L3MBTL3Q96JM7 780 aaPredicted RBP9.45□□□□□ -0.9
CCDC196-201ENST00000359454 PLEKHH1Q9ULM0 1364 aa9.45□□□□□ -0.9
CCDC196-201ENST00000359454 USP32Q8NFA0 1604 aa9.45□□□□□ -0.9
CCDC196-201ENST00000359454 KNDC1Q76NI1 1749 aa9.45□□□□□ -0.9
CCDC196-201ENST00000359454 FMN2Q9NZ56 1722 aa9.45□□□□□ -0.9
CCDC196-201ENST00000359454 POTEFA5A3E0 1075 aa9.44□□□□□ -0.9
CCDC196-201ENST00000359454 RGL3Q3MIN7 710 aa9.44□□□□□ -0.9
CCDC196-201ENST00000359454 DEFB132Q7Z7B7 95 aa9.44□□□□□ -0.9
CCDC196-201ENST00000359454 TNS3Q68CZ2 1445 aa9.44□□□□□ -0.9
CCDC196-201ENST00000359454 SPATA31E1Q6ZUB1 1445 aa9.44□□□□□ -0.9
CCDC196-201ENST00000359454 PIK3C2GO75747 1445 aa9.43□□□□□ -0.9
CCDC196-201ENST00000359454 YTHDC2Q9H6S0 1430 aaKnown RBP9.43□□□□□ -0.9
CCDC196-201ENST00000359454 SBNO1A3KN83 1393 aa9.43□□□□□ -0.9
CCDC196-201ENST00000359454 ONECUT3O60422 494 aaPredicted RBP9.43□□□□□ -0.9
CCDC196-201ENST00000359454 PDE4AP27815 886 aa9.43□□□□□ -0.9
CCDC196-201ENST00000359454 CCDC9Q9Y3X0 531 aaKnown RBP9.43□□□□□ -0.9
CCDC196-201ENST00000359454 KRT27Q7Z3Y8 459 aa9.42□□□□□ -0.9
CCDC196-201ENST00000359454 BRWD3Q6RI45 1802 aa9.42□□□□□ -0.9
CCDC196-201ENST00000359454 IFT172Q9UG01 1749 aa9.42□□□□□ -0.9
CCDC196-201ENST00000359454 NWD2Q9ULI1 1742 aa9.42□□□□□ -0.9
CCDC196-201ENST00000359454 ARHGEF10O15013 1369 aa9.41□□□□□ -0.9
CCDC196-201ENST00000359454 CABLES1Q8TDN4 633 aa9.41□□□□□ -0.9
CCDC196-201ENST00000359454 TMEM121BQ9BXQ6 578 aaPredicted RBP9.41□□□□□ -0.9
CCDC196-201ENST00000359454 CRISPLD2Q9H0B8 497 aa9.41□□□□□ -0.9
CCDC196-201ENST00000359454 C14orf93Q9H972 538 aaKnown RBP9.41□□□□□ -0.9
CCDC196-201ENST00000359454 LRP5O75197 1615 aa9.41□□□□□ -0.9
CCDC196-201ENST00000359454 NRXN1Q9ULB1 1477 aa9.4□□□□□ -0.9
CCDC196-201ENST00000359454 DHX57Q6P158 1386 aaKnown RBP9.4□□□□□ -0.9
CCDC196-201ENST00000359454 PLCH1Q4KWH8 1693 aa9.4□□□□□ -0.9
CCDC196-201ENST00000359454 BAG6P46379 1132 aa9.4□□□□□ -0.9
CCDC196-201ENST00000359454 LMOD2Q6P5Q4 547 aa9.4□□□□□ -0.9
CCDC196-201ENST00000359454 MPHOSPH9Q99550 1183 aa9.4□□□□□ -0.9
CCDC196-201ENST00000359454 LARP6Q9BRS8 491 aaKnown RBP9.4□□□□□ -0.9
CCDC196-201ENST00000359454 FAM83GA6ND36 823 aa9.39□□□□□ -0.91
CCDC196-201ENST00000359454 A0A0G2JS52 829 aa9.38□□□□□ -0.91
CCDC196-201ENST00000359454 PRKCSHP14314 528 aaPredicted RBP9.38□□□□□ -0.91
CCDC196-201ENST00000359454 ABCA3Q99758 1704 aa9.38□□□□□ -0.91
CCDC196-201ENST00000359454 ANKARQ7Z5J8 1434 aa9.38□□□□□ -0.91
CCDC196-201ENST00000359454 RGPD8O14715 1765 aaPredicted RBP9.37□□□□□ -0.91
CCDC196-201ENST00000359454 PSDA5PKW4 1024 aaPredicted RBP9.37□□□□□ -0.91
CCDC196-201ENST00000359454 HRCP23327 699 aa9.37□□□□□ -0.91
CCDC196-201ENST00000359454 FAM98CQ17RN3 349 aaKnown RBP9.37□□□□□ -0.91
CCDC196-201ENST00000359454 CFAP70Q5T0N1 1121 aa9.37□□□□□ -0.91
CCDC196-201ENST00000359454 ERICH6Q7L0X2 663 aa9.37□□□□□ -0.91
CCDC196-201ENST00000359454 TMC2Q8TDI7 906 aa9.37□□□□□ -0.91
CCDC196-201ENST00000359454 DDX27Q96GQ7 796 aaKnown RBP9.37□□□□□ -0.91
CCDC196-201ENST00000359454 PRAM1Q96QH2 718 aa9.37□□□□□ -0.91
CCDC196-201ENST00000359454 POGKQ9P215 609 aa9.37□□□□□ -0.91
CCDC196-201ENST00000359454 DLC1Q96QB1 1528 aa9.36□□□□□ -0.91
CCDC196-201ENST00000359454 ACIN1Q9UKV3 1341 aaKnown RBP9.36□□□□□ -0.91
CCDC196-201ENST00000359454 SAFB2Q14151 953 aaKnown RBP eCLIP9.36□□□□□ -0.91
CCDC196-201ENST00000359454 MFSD10Q14728 455 aa9.36□□□□□ -0.91
CCDC196-201ENST00000359454 PMFBP1Q8TBY8 1022 aa9.36□□□□□ -0.91
CCDC196-201ENST00000359454 BTG4Q9NY30 223 aa9.36□□□□□ -0.91
CCDC196-201ENST00000359454 NRAPQ86VF7 1730 aa9.36□□□□□ -0.91
CCDC196-201ENST00000359454 GPRASP1Q5JY77 1395 aa9.36□□□□□ -0.91
CCDC196-201ENST00000359454 C3orf67Q6ZVT6 689 aa9.35□□□□□ -0.91
CCDC196-201ENST00000359454 GPHNQ9NQX3 736 aaPredicted RBP9.35□□□□□ -0.91
CCDC196-201ENST00000359454 EIF3AQ14152 1382 aaKnown RBP9.35□□□□□ -0.91
CCDC196-201ENST00000359454 COL14A1Q05707 1796 aaKnown RBP9.35□□□□□ -0.91
CCDC196-201ENST00000359454 SPATA31A5Q5VU36 1347 aa9.34□□□□□ -0.91
CCDC196-201ENST00000359454 SPATA31A7Q8IWB4 1347 aa9.34□□□□□ -0.91
CCDC196-201ENST00000359454 ADGRB2O60241 1585 aa9.34□□□□□ -0.91
CCDC196-201ENST00000359454 EN1Q05925 392 aaPredicted RBP9.34□□□□□ -0.91
CCDC196-201ENST00000359454 RGPD1P0DJD0 1748 aa9.34□□□□□ -0.92
CCDC196-201ENST00000359454 TRPM3Q9HCF6 1732 aaPredicted RBP9.34□□□□□ -0.92
CCDC196-201ENST00000359454 EP400Q96L91 3159 aa9.33□□□□□ -0.92
CCDC196-201ENST00000359454 DISP2A7MBM2 1401 aa9.33□□□□□ -0.92
CCDC196-201ENST00000359454 E2F4Q16254 413 aa9.33□□□□□ -0.92
CCDC196-201ENST00000359454 LHX8Q68G74 356 aa9.33□□□□□ -0.92
CCDC196-201ENST00000359454 ALS2Q96Q42 1657 aa9.32□□□□□ -0.92
CCDC196-201ENST00000359454 NBR1Q14596 966 aa9.32□□□□□ -0.92
CCDC196-201ENST00000359454 R3HDM1Q15032 1099 aaKnown RBP9.32□□□□□ -0.92
CCDC196-201ENST00000359454 PPP1R15BQ5SWA1 713 aa9.32□□□□□ -0.92
CCDC196-201ENST00000359454 KCNV2Q8TDN2 545 aa9.32□□□□□ -0.92
CCDC196-201ENST00000359454 PRDM11Q9NQV5 511 aa9.32□□□□□ -0.92
CCDC196-201ENST00000359454 PRR36Q9H6K5 1346 aa9.31□□□□□ -0.92
CCDC196-201ENST00000359454 TULP4Q9NRJ4 1543 aa9.31□□□□□ -0.92
CCDC196-201ENST00000359454 C2orf72A6NCS6 295 aa9.31□□□□□ -0.92
CCDC196-201ENST00000359454 WASLO00401 505 aaPredicted RBP9.31□□□□□ -0.92
CCDC196-201ENST00000359454 FAM182BQ5T319 152 aa9.31□□□□□ -0.92
CCDC196-201ENST00000359454 NGDNQ8NEJ9 315 aaKnown RBP9.31□□□□□ -0.92
CCDC196-201ENST00000359454 HIRIP3Q9BW71 556 aaPredicted RBP9.31□□□□□ -0.92
CCDC196-201ENST00000359454 TRAK1Q9UPV9 953 aa9.31□□□□□ -0.92
CCDC196-201ENST00000359454 THSD7AQ9UPZ6 1657 aa9.31□□□□□ -0.92
CCDC196-201ENST00000359454 MINK1Q8N4C8 1332 aaPredicted RBP9.31□□□□□ -0.92
CCDC196-201ENST00000359454 ADGRB1O14514 1584 aa9.3□□□□□ -0.92
CCDC196-201ENST00000359454 DSG2Q14126 1118 aa9.3□□□□□ -0.92
CCDC196-201ENST00000359454 EZH2Q15910 746 aaKnown RBP9.3□□□□□ -0.92
CCDC196-201ENST00000359454 FAM196AQ6ZSG2 479 aa9.3□□□□□ -0.92
CCDC196-201ENST00000359454 SPATA31A1Q5TZJ5 1347 aa9.3□□□□□ -0.92
CCDC196-201ENST00000359454 PARD3Q8TEW0 1356 aa9.29□□□□□ -0.92
CCDC196-201ENST00000359454 TNS1Q9HBL0 1735 aaKnown RBP9.29□□□□□ -0.92
CCDC196-201ENST00000359454 KIF3CO14782 793 aa9.29□□□□□ -0.92
CCDC196-201ENST00000359454 TMEM92Q6UXU6 159 aa9.29□□□□□ -0.92
CCDC196-201ENST00000359454 CAMKK2Q96RR4 588 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms