RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 MTHFSP49914 203 aa18.48■□□□□ 0.55
PDLIM5-203ENST00000359265 MAPK8IP2Q13387 824 aaPredicted RBP18.48■□□□□ 0.55
PDLIM5-203ENST00000359265 SMG6Q86US8 1419 aaKnown RBP18.48■□□□□ 0.55
PDLIM5-203ENST00000359265 FOXO3O43524 673 aa18.47■□□□□ 0.55
PDLIM5-203ENST00000359265 SEPT12Q8IYM1 358 aa18.47■□□□□ 0.55
PDLIM5-203ENST00000359265 ZBED9Q6R2W3 1325 aa18.47■□□□□ 0.55
PDLIM5-203ENST00000359265 COL3A1P02461 1466 aaPredicted RBP18.46■□□□□ 0.55
PDLIM5-203ENST00000359265 USP31Q70CQ4 1352 aa18.46■□□□□ 0.55
PDLIM5-203ENST00000359265 PAK3O75914 559 aaPredicted RBP18.44■□□□□ 0.54
PDLIM5-203ENST00000359265 EN1Q05925 392 aaPredicted RBP18.44■□□□□ 0.54
PDLIM5-203ENST00000359265 UNC5CLQ8IV45 518 aa18.44■□□□□ 0.54
PDLIM5-203ENST00000359265 ALS2Q96Q42 1657 aa18.44■□□□□ 0.54
PDLIM5-203ENST00000359265 BAG6P46379 1132 aa18.43■□□□□ 0.54
PDLIM5-203ENST00000359265 KRT28Q7Z3Y7 464 aa18.43■□□□□ 0.54
PDLIM5-203ENST00000359265 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.43■□□□□ 0.54
PDLIM5-203ENST00000359265 SBNO1A3KN83 1393 aa18.42■□□□□ 0.54
PDLIM5-203ENST00000359265 PXDNQ92626 1479 aa18.42■□□□□ 0.54
PDLIM5-203ENST00000359265 LTN1O94822 1766 aa18.41■□□□□ 0.54
PDLIM5-203ENST00000359265 ABTB2Q8N961 1025 aa18.41■□□□□ 0.54
PDLIM5-203ENST00000359265 ADAMTS8Q9UP79 889 aa18.41■□□□□ 0.54
PDLIM5-203ENST00000359265 SLIT2O94813 1529 aa18.4■□□□□ 0.54
PDLIM5-203ENST00000359265 KRT27Q7Z3Y8 459 aa18.4■□□□□ 0.54
PDLIM5-203ENST00000359265 PEAK1Q9H792 1746 aa18.4■□□□□ 0.54
PDLIM5-203ENST00000359265 TNS3Q68CZ2 1445 aa18.4■□□□□ 0.54
PDLIM5-203ENST00000359265 XPCQ01831 940 aaPredicted RBP18.39■□□□□ 0.53
PDLIM5-203ENST00000359265 POLKQ9UBT6 870 aa18.39■□□□□ 0.53
PDLIM5-203ENST00000359265 NUDCQ9Y266 331 aa18.39■□□□□ 0.53
PDLIM5-203ENST00000359265 ONECUT3O60422 494 aaPredicted RBP18.38■□□□□ 0.53
PDLIM5-203ENST00000359265 NLRP6P59044 892 aa18.38■□□□□ 0.53
PDLIM5-203ENST00000359265 SENP3-EIF4A1A0A087X0R7 540 aa18.37■□□□□ 0.53
PDLIM5-203ENST00000359265 ARHGEF10O15013 1369 aa18.37■□□□□ 0.53
PDLIM5-203ENST00000359265 DIAPH1O60610 1272 aaKnown RBP18.36■□□□□ 0.53
PDLIM5-203ENST00000359265 EMILIN1Q9Y6C2 1016 aa18.35■□□□□ 0.53
PDLIM5-203ENST00000359265 PHRF1Q9P1Y6 1649 aaKnown RBP18.34■□□□□ 0.53
PDLIM5-203ENST00000359265 SLIT3O75094 1523 aa18.34■□□□□ 0.53
PDLIM5-203ENST00000359265 SPATA31A3Q5VYP0 1347 aa18.34■□□□□ 0.53
PDLIM5-203ENST00000359265 PPM1GO15355 546 aaPredicted RBP18.34■□□□□ 0.53
PDLIM5-203ENST00000359265 LMOD2Q6P5Q4 547 aa18.34■□□□□ 0.53
PDLIM5-203ENST00000359265 FBLN1P23142 703 aa18.33■□□□□ 0.52
PDLIM5-203ENST00000359265 RRS1Q15050 365 aaKnown RBP18.33■□□□□ 0.52
PDLIM5-203ENST00000359265 NFAT5O94916 1531 aa18.33■□□□□ 0.52
PDLIM5-203ENST00000359265 U2AF1L5P0DN76 240 aaPredicted RBP18.32■□□□□ 0.52
PDLIM5-203ENST00000359265 U2AF1Q01081 240 aaKnown RBP eCLIP18.32■□□□□ 0.52
PDLIM5-203ENST00000359265 VPS72Q15906 364 aa18.32■□□□□ 0.52
PDLIM5-203ENST00000359265 EZH2Q15910 746 aaKnown RBP18.32■□□□□ 0.52
PDLIM5-203ENST00000359265 NUTM2GQ5VZR2 741 aa18.32■□□□□ 0.52
PDLIM5-203ENST00000359265 ZNF784Q8NCA9 323 aaPredicted RBP18.32■□□□□ 0.52
PDLIM5-203ENST00000359265 KCNH5Q8NCM2 988 aa18.32■□□□□ 0.52
PDLIM5-203ENST00000359265 RGPD1P0DJD0 1748 aa18.32■□□□□ 0.52
PDLIM5-203ENST00000359265 CRYBG1Q9Y4K1 1723 aa18.32■□□□□ 0.52
PDLIM5-203ENST00000359265 KIF24Q5T7B8 1368 aa18.31■□□□□ 0.52
PDLIM5-203ENST00000359265 USP19O94966 1318 aa18.31■□□□□ 0.52
PDLIM5-203ENST00000359265 U2SURPO15042 1029 aaKnown RBP18.31■□□□□ 0.52
PDLIM5-203ENST00000359265 FAM182BQ5T319 152 aa18.31■□□□□ 0.52
PDLIM5-203ENST00000359265 CCDC146Q8IYE0 955 aa18.31■□□□□ 0.52
PDLIM5-203ENST00000359265 NGEFQ8N5V2 710 aa18.31■□□□□ 0.52
PDLIM5-203ENST00000359265 FLT4P35916 1363 aa18.3■□□□□ 0.52
PDLIM5-203ENST00000359265 RUNDC1Q96C34 613 aa18.3■□□□□ 0.52
PDLIM5-203ENST00000359265 MAP3K19Q56UN5 1328 aa18.29■□□□□ 0.52
PDLIM5-203ENST00000359265 SOX12O15370 315 aa18.29■□□□□ 0.52
PDLIM5-203ENST00000359265 PNNQ9H307 717 aaKnown RBP18.29■□□□□ 0.52
PDLIM5-203ENST00000359265 RTL1A6NKG5 1358 aa18.29■□□□□ 0.52
PDLIM5-203ENST00000359265 PDE3BQ13370 1112 aa18.28■□□□□ 0.52
PDLIM5-203ENST00000359265 ABCA3Q99758 1704 aa18.28■□□□□ 0.52
PDLIM5-203ENST00000359265 CCDC9Q9Y3X0 531 aaKnown RBP18.27■□□□□ 0.52
PDLIM5-203ENST00000359265 CAMTA1Q9Y6Y1 1673 aa18.27■□□□□ 0.52
PDLIM5-203ENST00000359265 APAF1O14727 1248 aa18.26■□□□□ 0.51
PDLIM5-203ENST00000359265 IL13P35225 146 aa18.26■□□□□ 0.51
PDLIM5-203ENST00000359265 C1QTNF8P60827 252 aa18.26■□□□□ 0.51
PDLIM5-203ENST00000359265 SALL2Q9Y467 1007 aaPredicted RBP18.26■□□□□ 0.51
PDLIM5-203ENST00000359265 GCP02774 474 aa18.25■□□□□ 0.51
PDLIM5-203ENST00000359265 AMPHP49418 695 aa18.25■□□□□ 0.51
PDLIM5-203ENST00000359265 CAMKK2Q96RR4 588 aa18.25■□□□□ 0.51
PDLIM5-203ENST00000359265 MAPK8IP3Q9UPT6 1336 aa18.24■□□□□ 0.51
PDLIM5-203ENST00000359265 DISP2A7MBM2 1401 aa18.23■□□□□ 0.51
PDLIM5-203ENST00000359265 DLG5Q8TDM6 1919 aa18.23■□□□□ 0.51
PDLIM5-203ENST00000359265 FCHSD2O94868 740 aa18.23■□□□□ 0.51
PDLIM5-203ENST00000359265 TNS1Q9HBL0 1735 aaKnown RBP18.23■□□□□ 0.51
PDLIM5-203ENST00000359265 ABCC6O95255 1503 aa18.23■□□□□ 0.51
PDLIM5-203ENST00000359265 RGPD5Q99666 1765 aa18.22■□□□□ 0.51
PDLIM5-203ENST00000359265 A0A0G2JS52 829 aa18.22■□□□□ 0.51
PDLIM5-203ENST00000359265 NEFMP07197 916 aa18.22■□□□□ 0.51
PDLIM5-203ENST00000359265 MYT1Q01538 1121 aa18.22■□□□□ 0.51
PDLIM5-203ENST00000359265 EIF4A2Q14240 407 aaKnown RBP18.22■□□□□ 0.51
PDLIM5-203ENST00000359265 FAM98CQ17RN3 349 aaKnown RBP18.22■□□□□ 0.51
PDLIM5-203ENST00000359265 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
PDLIM5-203ENST00000359265 HAP1P54257 671 aaPredicted RBP18.21■□□□□ 0.51
PDLIM5-203ENST00000359265 HSP90AB2PQ58FF8 381 aa18.21■□□□□ 0.51
PDLIM5-203ENST00000359265 TCP11L2Q8N4U5 519 aa18.21■□□□□ 0.51
PDLIM5-203ENST00000359265 CABLES1Q8TDN4 633 aa18.21■□□□□ 0.51
PDLIM5-203ENST00000359265 DCAF8L1A6NGE4 600 aa18.2■□□□□ 0.5
PDLIM5-203ENST00000359265 HOXC9P31274 260 aa18.2■□□□□ 0.5
PDLIM5-203ENST00000359265 PLEKHF1Q96S99 279 aa18.2■□□□□ 0.5
PDLIM5-203ENST00000359265 RSPH6AQ9H0K4 717 aa18.2■□□□□ 0.5
PDLIM5-203ENST00000359265 ZNF521Q96K83 1311 aa18.2■□□□□ 0.5
PDLIM5-203ENST00000359265 PLCH1Q4KWH8 1693 aa18.19■□□□□ 0.5
PDLIM5-203ENST00000359265 PLEKHG5O94827 1062 aa18.19■□□□□ 0.5
PDLIM5-203ENST00000359265 ARHGEF25Q86VW2 580 aa18.19■□□□□ 0.5
PDLIM5-203ENST00000359265 RGPD2P0DJD1 1756 aa18.19■□□□□ 0.5
PDLIM5-203ENST00000359265 FAM208AQ9UK61 1670 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms