RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 IBSPP21815 317 aaPredicted RBP15.46■□□□□ 0.07
NLRC3-202ENST00000359128 C1orf115Q9H7X2 142 aa15.46■□□□□ 0.07
NLRC3-202ENST00000359128 RPGRIP1LQ68CZ1 1315 aa15.46■□□□□ 0.07
NLRC3-202ENST00000359128 PDCL3Q9H2J4 239 aa15.46■□□□□ 0.07
NLRC3-202ENST00000359128 TTLL12Q14166 644 aaPredicted RBP15.46■□□□□ 0.06
NLRC3-202ENST00000359128 TDO2P48775 406 aa15.45■□□□□ 0.06
NLRC3-202ENST00000359128 NESP48681 1621 aa15.45■□□□□ 0.06
NLRC3-202ENST00000359128 SMARCE1Q969G3 411 aa15.45■□□□□ 0.06
NLRC3-202ENST00000359128 SPINK5Q9NQ38 1064 aaPredicted RBP15.45■□□□□ 0.06
NLRC3-202ENST00000359128 BRD4O60885 1362 aaPredicted RBP15.45■□□□□ 0.06
NLRC3-202ENST00000359128 LRP2BPQ9P2M1 347 aa15.44■□□□□ 0.06
NLRC3-202ENST00000359128 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
NLRC3-202ENST00000359128 RRS1Q15050 365 aaKnown RBP15.44■□□□□ 0.06
NLRC3-202ENST00000359128 LRRCC1Q9C099 1032 aa15.44■□□□□ 0.06
NLRC3-202ENST00000359128 TTLL5Q6EMB2 1281 aa15.43■□□□□ 0.06
NLRC3-202ENST00000359128 MAP4K4O95819 1239 aaPredicted RBP15.43■□□□□ 0.06
NLRC3-202ENST00000359128 PIP4K2AP48426 406 aaPredicted RBP15.43■□□□□ 0.06
NLRC3-202ENST00000359128 EPRSP07814 1512 aaKnown RBP15.43■□□□□ 0.06
NLRC3-202ENST00000359128 MNS1Q8NEH6 495 aa15.43■□□□□ 0.06
NLRC3-202ENST00000359128 NGLY1Q96IV0 654 aa15.43■□□□□ 0.06
NLRC3-202ENST00000359128 SLC12A5Q9H2X9 1139 aa15.43■□□□□ 0.06
NLRC3-202ENST00000359128 ACBD3Q9H3P7 528 aa15.43■□□□□ 0.06
NLRC3-202ENST00000359128 IFT57Q9NWB7 429 aa15.43■□□□□ 0.06
NLRC3-202ENST00000359128 KINO60870 393 aaKnown RBP15.43■□□□□ 0.06
NLRC3-202ENST00000359128 STK38Q15208 465 aa15.42■□□□□ 0.06
NLRC3-202ENST00000359128 GCC1Q96CN9 775 aa15.42■□□□□ 0.06
NLRC3-202ENST00000359128 NOL7Q9UMY1 257 aaKnown RBP15.42■□□□□ 0.06
NLRC3-202ENST00000359128 ATAD2Q6PL18 1390 aa15.42■□□□□ 0.06
NLRC3-202ENST00000359128 EFCAB5A4FU69 1503 aa15.42■□□□□ 0.06
NLRC3-202ENST00000359128 BRPF1P55201 1214 aaPredicted RBP15.42■□□□□ 0.06
NLRC3-202ENST00000359128 AACSQ86V21 672 aa15.42■□□□□ 0.06
NLRC3-202ENST00000359128 ANKIB1Q9P2G1 1089 aa15.42■□□□□ 0.06
NLRC3-202ENST00000359128 GNAT3A8MTJ3 354 aa15.42■□□□□ 0.06
NLRC3-202ENST00000359128 DMRT2Q9Y5R5 561 aa15.42■□□□□ 0.06
NLRC3-202ENST00000359128 UBAC1Q9BSL1 405 aa15.41■□□□□ 0.06
NLRC3-202ENST00000359128 CEP126Q9P2H0 1117 aa15.41■□□□□ 0.06
NLRC3-202ENST00000359128 TEX35Q5T0J7 233 aa15.41■□□□□ 0.06
NLRC3-202ENST00000359128 CFTRP13569 1480 aa15.41■□□□□ 0.06
NLRC3-202ENST00000359128 LETM1O95202 739 aaPredicted RBP15.41■□□□□ 0.06
NLRC3-202ENST00000359128 SMC2O95347 1197 aa15.41■□□□□ 0.06
NLRC3-202ENST00000359128 TRIM21P19474 475 aaKnown RBP15.41■□□□□ 0.06
NLRC3-202ENST00000359128 STIM1Q13586 685 aa15.41■□□□□ 0.06
NLRC3-202ENST00000359128 PDCP20941 246 aa15.41■□□□□ 0.06
NLRC3-202ENST00000359128 STK3Q13188 491 aa15.41■□□□□ 0.06
NLRC3-202ENST00000359128 ANKRD1Q15327 319 aa15.41■□□□□ 0.06
NLRC3-202ENST00000359128 CRACR2BQ8N4Y2 399 aaPredicted RBP15.41■□□□□ 0.06
NLRC3-202ENST00000359128 RPGRQ92834 1020 aaKnown RBP15.41■□□□□ 0.06
NLRC3-202ENST00000359128 CAVIN4Q5BKX8 364 aa15.4■□□□□ 0.06
NLRC3-202ENST00000359128 USP5P45974 858 aa15.4■□□□□ 0.06
NLRC3-202ENST00000359128 JMYQ8N9B5 988 aa15.4■□□□□ 0.06
NLRC3-202ENST00000359128 TSR2Q969E8 191 aaKnown RBP15.4■□□□□ 0.06
NLRC3-202ENST00000359128 TANGO6Q9C0B7 1094 aa15.4■□□□□ 0.06
NLRC3-202ENST00000359128 CYP46A1Q9Y6A2 500 aa15.4■□□□□ 0.06
NLRC3-202ENST00000359128 CEBPZQ03701 1054 aaKnown RBP15.4■□□□□ 0.06
NLRC3-202ENST00000359128 NUDT16Q96DE0 195 aaKnown RBP15.4■□□□□ 0.06
NLRC3-202ENST00000359128 CCDC85AQ96PX6 553 aaPredicted RBP15.4■□□□□ 0.06
NLRC3-202ENST00000359128 DESP17661 470 aa15.39■□□□□ 0.05
NLRC3-202ENST00000359128 ZNF287Q9HBT7 754 aa15.39■□□□□ 0.05
NLRC3-202ENST00000359128 LRPPRCP42704 1394 aaKnown RBP15.39■□□□□ 0.05
NLRC3-202ENST00000359128 TNIP1Q15025 636 aa15.39■□□□□ 0.05
NLRC3-202ENST00000359128 MCM2P49736 904 aa15.39■□□□□ 0.05
NLRC3-202ENST00000359128 METTL24Q5JXM2 366 aa15.39■□□□□ 0.05
NLRC3-202ENST00000359128 NEBLO76041 1014 aa15.38■□□□□ 0.05
NLRC3-202ENST00000359128 POLR3DP05423 398 aaPredicted RBP15.38■□□□□ 0.05
NLRC3-202ENST00000359128 CHMP4BP1P59074 171 aa15.38■□□□□ 0.05
NLRC3-202ENST00000359128 ARGLU1Q9NWB6 273 aaPredicted RBP15.38■□□□□ 0.05
NLRC3-202ENST00000359128 KIAA1107Q9UPP5 1409 aa15.38■□□□□ 0.05
NLRC3-202ENST00000359128 SUPT6HQ7KZ85 1726 aaKnown RBP15.38■□□□□ 0.05
NLRC3-202ENST00000359128 CDKL5O76039 1030 aa15.38■□□□□ 0.05
NLRC3-202ENST00000359128 TSHZ2Q9NRE2 1034 aa15.38■□□□□ 0.05
NLRC3-202ENST00000359128 NEK4P51957 841 aa15.38■□□□□ 0.05
NLRC3-202ENST00000359128 NBPF1Q3BBV0 1214 aa15.37■□□□□ 0.05
NLRC3-202ENST00000359128 SCLT1Q96NL6 688 aa15.37■□□□□ 0.05
NLRC3-202ENST00000359128 CTNNA3Q9UI47 895 aa15.37■□□□□ 0.05
NLRC3-202ENST00000359128 TROQ12816 1431 aaPredicted RBP15.37■□□□□ 0.05
NLRC3-202ENST00000359128 DACH1Q9UI36 760 aa15.37■□□□□ 0.05
NLRC3-202ENST00000359128 DNAI2Q9GZS0 605 aa15.37■□□□□ 0.05
NLRC3-202ENST00000359128 BMP2KQ9NSY1 1161 aaPredicted RBP15.37■□□□□ 0.05
NLRC3-202ENST00000359128 ZNHIT6Q9NWK9 470 aaKnown RBP15.37■□□□□ 0.05
NLRC3-202ENST00000359128 CD109Q6YHK3 1445 aa15.37■□□□□ 0.05
NLRC3-202ENST00000359128 AIDAQ96BJ3 306 aa15.37■□□□□ 0.05
NLRC3-202ENST00000359128 ZNF219Q9P2Y4 722 aaPredicted RBP15.37■□□□□ 0.05
NLRC3-202ENST00000359128 PTCD1O75127 700 aaKnown RBP15.36■□□□□ 0.05
NLRC3-202ENST00000359128 IDH1O75874 414 aaKnown RBP15.36■□□□□ 0.05
NLRC3-202ENST00000359128 ABCF2Q9UG63 623 aa15.36■□□□□ 0.05
NLRC3-202ENST00000359128 SSBP05455 408 aaKnown RBP eCLIP15.36■□□□□ 0.05
NLRC3-202ENST00000359128 GSE1Q14687 1217 aa15.36■□□□□ 0.05
NLRC3-202ENST00000359128 FAM13BQ9NYF5 915 aa15.36■□□□□ 0.05
NLRC3-202ENST00000359128 ANKRD30BQ9BXX2 1392 aa15.36■□□□□ 0.05
NLRC3-202ENST00000359128 MYCNP04198 464 aaPredicted RBP15.36■□□□□ 0.05
NLRC3-202ENST00000359128 PIBF1Q8WXW3 757 aa15.36■□□□□ 0.05
NLRC3-202ENST00000359128 AKAP2Q9Y2D5 859 aa15.36■□□□□ 0.05
NLRC3-202ENST00000359128 TOPBP1Q92547 1522 aa15.36■□□□□ 0.05
NLRC3-202ENST00000359128 SPDYE4A6NLX3 237 aa15.35■□□□□ 0.05
NLRC3-202ENST00000359128 MPRIPQ6WCQ1 1025 aa15.35■□□□□ 0.05
NLRC3-202ENST00000359128 SRGAP3O43295 1099 aa15.35■□□□□ 0.05
NLRC3-202ENST00000359128 SEC63Q9UGP8 760 aaKnown RBP15.35■□□□□ 0.05
NLRC3-202ENST00000359128 PPP4R3AQ6IN85 833 aa15.35■□□□□ 0.05
NLRC3-202ENST00000359128 AEBP1Q8IUX7 1158 aa15.35■□□□□ 0.05
NLRC3-202ENST00000359128 DZIP1Q86YF9 867 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms