RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 CWC22Q9HCG8 908 aaKnown RBP22.26■■□□□ 1.15
PTPA-206ENST00000358994 TRAK1Q9UPV9 953 aa22.26■■□□□ 1.15
PTPA-206ENST00000358994 TRAPPC8Q9Y2L5 1435 aa22.26■■□□□ 1.15
PTPA-206ENST00000358994 MYRIPQ8NFW9 859 aa22.25■■□□□ 1.15
PTPA-206ENST00000358994 USP26Q9BXU7 913 aa22.24■■□□□ 1.15
PTPA-206ENST00000358994 ZC3H13Q5T200 1668 aaKnown RBP22.24■■□□□ 1.15
PTPA-206ENST00000358994 KIAA2012Q0VF49 1180 aa22.23■■□□□ 1.15
PTPA-206ENST00000358994 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.23■■□□□ 1.15
PTPA-206ENST00000358994 INO80Q9ULG1 1556 aaPredicted RBP22.23■■□□□ 1.15
PTPA-206ENST00000358994 IFT172Q9UG01 1749 aa22.23■■□□□ 1.15
PTPA-206ENST00000358994 ZNF710Q8N1W2 664 aa22.23■■□□□ 1.15
PTPA-206ENST00000358994 TSC1Q92574 1164 aa22.23■■□□□ 1.15
PTPA-206ENST00000358994 QRICH2Q9H0J4 1663 aa22.22■■□□□ 1.15
PTPA-206ENST00000358994 ZBTB7CA1YPR0 619 aa22.22■■□□□ 1.15
PTPA-206ENST00000358994 REREQ9P2R6 1566 aa22.22■■□□□ 1.15
PTPA-206ENST00000358994 DEPDC5O75140 1603 aa22.21■■□□□ 1.15
PTPA-206ENST00000358994 PLEKHM2Q8IWE5 1019 aa22.21■■□□□ 1.15
PTPA-206ENST00000358994 NRXN1Q9ULB1 1477 aa22.2■■□□□ 1.14
PTPA-206ENST00000358994 PTMAP06454 111 aaKnown RBP22.2■■□□□ 1.14
PTPA-206ENST00000358994 KIF1BO60333 1816 aa22.19■■□□□ 1.14
PTPA-206ENST00000358994 BRPF1P55201 1214 aaPredicted RBP22.19■■□□□ 1.14
PTPA-206ENST00000358994 NSD2O96028 1365 aa22.19■■□□□ 1.14
PTPA-206ENST00000358994 DNTTIP2Q5QJE6 756 aaKnown RBP22.18■■□□□ 1.14
PTPA-206ENST00000358994 ABCC1P33527 1531 aa22.18■■□□□ 1.14
PTPA-206ENST00000358994 SPAG9O60271 1321 aaKnown RBP22.17■■□□□ 1.14
PTPA-206ENST00000358994 PIK3R4Q99570 1358 aa22.17■■□□□ 1.14
PTPA-206ENST00000358994 FOXD4L5Q5VV16 416 aaPredicted RBP22.17■■□□□ 1.14
PTPA-206ENST00000358994 FOXD4L4Q8WXT5 416 aaPredicted RBP22.17■■□□□ 1.14
PTPA-206ENST00000358994 MROH2AA6NES4 1674 aa22.17■■□□□ 1.14
PTPA-206ENST00000358994 PLCH2O75038 1416 aa22.17■■□□□ 1.14
PTPA-206ENST00000358994 SETBP1Q9Y6X0 1596 aa22.17■■□□□ 1.14
PTPA-206ENST00000358994 ST18O60284 1047 aa22.16■■□□□ 1.14
PTPA-206ENST00000358994 TRHP20396 242 aaPredicted RBP22.16■■□□□ 1.14
PTPA-206ENST00000358994 CBX1P83916 185 aa22.16■■□□□ 1.14
PTPA-206ENST00000358994 TTC22Q5TAA0 569 aa22.16■■□□□ 1.14
PTPA-206ENST00000358994 EFCAB2Q5VUJ9 269 aa22.16■■□□□ 1.14
PTPA-206ENST00000358994 COL3A1P02461 1466 aaPredicted RBP22.16■■□□□ 1.14
PTPA-206ENST00000358994 PRIMPOLQ96LW4 560 aa22.16■■□□□ 1.14
PTPA-206ENST00000358994 CHMP4BQ9H444 224 aaKnown RBP22.16■■□□□ 1.14
PTPA-206ENST00000358994 MBD3O95983 291 aa22.15■■□□□ 1.14
PTPA-206ENST00000358994 ANKRD36BQ8N2N9 1353 aa22.15■■□□□ 1.14
PTPA-206ENST00000358994 GTF2F1P35269 517 aaKnown RBP eCLIP22.15■■□□□ 1.146e-11■■■■■ 32.8
PTPA-206ENST00000358994 TSPY26PQ9H489 355 aa22.15■■□□□ 1.14
PTPA-206ENST00000358994 VWDEQ8N2E2 1590 aa22.15■■□□□ 1.14
PTPA-206ENST00000358994 AFAP1Q8N556 730 aa22.14■■□□□ 1.14
PTPA-206ENST00000358994 MPNDQ8N594 471 aa22.14■■□□□ 1.14
PTPA-206ENST00000358994 MRPL50Q8N5N7 158 aaKnown RBP22.14■■□□□ 1.14
PTPA-206ENST00000358994 C16orf71Q8IYS4 520 aaPredicted RBP22.14■■□□□ 1.13
PTPA-206ENST00000358994 ZNF830Q96NB3 372 aaPredicted RBP22.14■■□□□ 1.13
PTPA-206ENST00000358994 PTCH1Q13635 1447 aa22.13■■□□□ 1.13
PTPA-206ENST00000358994 HMGN5P82970 282 aaKnown RBP22.13■■□□□ 1.13
PTPA-206ENST00000358994 ATP2B3Q16720 1220 aa22.13■■□□□ 1.13
PTPA-206ENST00000358994 INTS3Q68E01 1043 aaKnown RBP22.13■■□□□ 1.13
PTPA-206ENST00000358994 TMEM132EQ6IEE7 984 aa22.13■■□□□ 1.13
PTPA-206ENST00000358994 PIBF1Q8WXW3 757 aa22.13■■□□□ 1.13
PTPA-206ENST00000358994 ARHGAP45Q92619 1136 aa22.13■■□□□ 1.13
PTPA-206ENST00000358994 CFAP44Q96MT7 982 aa22.13■■□□□ 1.13
PTPA-206ENST00000358994 NOLC1Q14978 699 aaKnown RBP eCLIP22.12■■□□□ 1.13
PTPA-206ENST00000358994 ZFYVE16Q7Z3T8 1539 aa22.12■■□□□ 1.13
PTPA-206ENST00000358994 ZNF428Q96B54 188 aa22.12■■□□□ 1.13
PTPA-206ENST00000358994 GTPBP4Q9BZE4 634 aaKnown RBP22.12■■□□□ 1.13
PTPA-206ENST00000358994 FAM177BA6PVY3 158 aa22.11■■□□□ 1.13
PTPA-206ENST00000358994 VAMP4O75379 141 aa22.11■■□□□ 1.13
PTPA-206ENST00000358994 ABCC4O15439 1325 aa22.11■■□□□ 1.13
PTPA-206ENST00000358994 NPM1P06748 294 aaKnown RBP eCLIP22.11■■□□□ 1.13
PTPA-206ENST00000358994 PPP4R3BQ5MIZ7 849 aa22.11■■□□□ 1.13
PTPA-206ENST00000358994 FGD1P98174 961 aa22.1■■□□□ 1.13
PTPA-206ENST00000358994 C17orf53Q8N3J3 647 aaPredicted RBP22.1■■□□□ 1.13
PTPA-206ENST00000358994 TSPYL6Q8N831 410 aa22.09■■□□□ 1.13
PTPA-206ENST00000358994 GGNBP2Q9H3C7 697 aa22.09■■□□□ 1.13
PTPA-206ENST00000358994 C14orf93Q9H972 538 aaKnown RBP22.09■■□□□ 1.13
PTPA-206ENST00000358994 ADGRB1O14514 1584 aa22.09■■□□□ 1.13
PTPA-206ENST00000358994 OTUD7AQ8TE49 926 aaPredicted RBP22.09■■□□□ 1.13
PTPA-206ENST00000358994 DCTPP1Q9H773 170 aa22.09■■□□□ 1.13
PTPA-206ENST00000358994 KIF3BO15066 747 aa22.08■■□□□ 1.13
PTPA-206ENST00000358994 KNDC1Q76NI1 1749 aa22.08■■□□□ 1.12
PTPA-206ENST00000358994 SDSP20132 328 aa22.08■■□□□ 1.12
PTPA-206ENST00000358994 ATAD2Q6PL18 1390 aa22.08■■□□□ 1.12
PTPA-206ENST00000358994 BRD1O95696 1058 aa22.07■■□□□ 1.12
PTPA-206ENST00000358994 KIF3AQ9Y496 699 aa22.07■■□□□ 1.12
PTPA-206ENST00000358994 KIF20AO95235 890 aa22.07■■□□□ 1.12
PTPA-206ENST00000358994 TTC12Q9H892 705 aaPredicted RBP22.07■■□□□ 1.12
PTPA-206ENST00000358994 TULP4Q9NRJ4 1543 aa22.06■■□□□ 1.12
PTPA-206ENST00000358994 TMX3Q96JJ7 454 aa22.05■■□□□ 1.12
PTPA-206ENST00000358994 BCL2L12Q9HB09 334 aa22.05■■□□□ 1.12
PTPA-206ENST00000358994 CABP2Q9NPB3 220 aa22.05■■□□□ 1.12
PTPA-206ENST00000358994 EVC2Q86UK5 1308 aa22.05■■□□□ 1.12
PTPA-206ENST00000358994 ELL2O00472 640 aaPredicted RBP22.05■■□□□ 1.12
PTPA-206ENST00000358994 FKBP5Q13451 457 aaPredicted RBP22.04■■□□□ 1.12
PTPA-206ENST00000358994 PUS7Q96PZ0 661 aaKnown RBP22.04■■□□□ 1.12
PTPA-206ENST00000358994 USP25Q9UHP3 1055 aa22.04■■□□□ 1.12
PTPA-206ENST00000358994 CHGAP10645 457 aaKnown RBP22.04■■□□□ 1.12
PTPA-206ENST00000358994 SYAP1Q96A49 352 aaPredicted RBP22.04■■□□□ 1.12
PTPA-206ENST00000358994 SPTLC3Q9NUV7 552 aa22.04■■□□□ 1.12
PTPA-206ENST00000358994 DIAPH1O60610 1272 aaKnown RBP22.03■■□□□ 1.12
PTPA-206ENST00000358994 LETM1O95202 739 aaPredicted RBP22.03■■□□□ 1.12
PTPA-206ENST00000358994 THUMPD2Q9BTF0 503 aaKnown RBP22.03■■□□□ 1.12
PTPA-206ENST00000358994 A0A1W2PP64 1363 aa22.03■■□□□ 1.12
PTPA-206ENST00000358994 GADD45BO75293 160 aaPredicted RBP22.03■■□□□ 1.12
PTPA-206ENST00000358994 CASC1Q6TDU7 716 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms