RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 RIMS2Q9UQ26 1411 aa17.85■□□□□ 0.45
APP-205ENST00000358918 MTHFSP49914 203 aa17.84■□□□□ 0.45
APP-205ENST00000358918 PUS7Q96PZ0 661 aaKnown RBP17.84■□□□□ 0.45
APP-205ENST00000358918 KIF2CQ99661 725 aa17.84■□□□□ 0.45
APP-205ENST00000358918 BMP2KLQ5H9B9 411 aa17.84■□□□□ 0.45
APP-205ENST00000358918 TSR2Q969E8 191 aaKnown RBP17.84■□□□□ 0.45
APP-205ENST00000358918 LNPKQ9C0E8 428 aa17.84■□□□□ 0.45
APP-205ENST00000358918 EXOSC9Q06265 439 aaKnown RBP17.83■□□□□ 0.45
APP-205ENST00000358918 CHD1LQ86WJ1 897 aa17.83■□□□□ 0.45
APP-205ENST00000358918 R3HCC1Q9Y3T6 440 aaKnown RBP17.83■□□□□ 0.45
APP-205ENST00000358918 ZNF445P59923 1031 aa17.83■□□□□ 0.44
APP-205ENST00000358918 SSH1Q8WYL5 1049 aa17.83■□□□□ 0.44
APP-205ENST00000358918 ZBTB40Q9NUA8 1239 aa17.83■□□□□ 0.44
APP-205ENST00000358918 CD2BP2O95400 341 aaKnown RBP17.82■□□□□ 0.44
APP-205ENST00000358918 BAG4O95429 457 aaKnown RBP17.82■□□□□ 0.44
APP-205ENST00000358918 TMEM57Q8N5G2 664 aa17.82■□□□□ 0.44
APP-205ENST00000358918 FAM13BQ9NYF5 915 aa17.82■□□□□ 0.44
APP-205ENST00000358918 U2AF1L5P0DN76 240 aaPredicted RBP17.82■□□□□ 0.44
APP-205ENST00000358918 U2AF1Q01081 240 aaKnown RBP eCLIP17.82■□□□□ 0.44
APP-205ENST00000358918 NOB1Q9ULX3 412 aaKnown RBP17.82■□□□□ 0.44
APP-205ENST00000358918 ANKRD36BQ8N2N9 1353 aa17.82■□□□□ 0.44
APP-205ENST00000358918 GAS2L2Q8NHY3 880 aa17.81■□□□□ 0.44
APP-205ENST00000358918 KIF16BQ96L93 1317 aa17.81■□□□□ 0.44
APP-205ENST00000358918 NOL7Q9UMY1 257 aaKnown RBP17.81■□□□□ 0.44
APP-205ENST00000358918 ZNF500O60304 480 aaPredicted RBP17.8■□□□□ 0.44
APP-205ENST00000358918 PRDM4Q9UKN5 801 aa17.8■□□□□ 0.44
APP-205ENST00000358918 IPO8O15397 1037 aaKnown RBP17.79■□□□□ 0.44
APP-205ENST00000358918 WAPLQ7Z5K2 1190 aa17.79■□□□□ 0.44
APP-205ENST00000358918 MTERF4Q7Z6M4 381 aaKnown RBP17.79■□□□□ 0.44
APP-205ENST00000358918 ADGRB2O60241 1585 aa17.78■□□□□ 0.44
APP-205ENST00000358918 NCLP19338 710 aaKnown RBP17.78■□□□□ 0.44
APP-205ENST00000358918 UQCRHLA0A096LP55 91 aa17.77■□□□□ 0.44
APP-205ENST00000358918 UQCRHP07919 91 aa17.77■□□□□ 0.44
APP-205ENST00000358918 CSPP1Q1MSJ5 1256 aa17.77■□□□□ 0.44
APP-205ENST00000358918 A0A1W2PP64 1363 aa17.77■□□□□ 0.44
APP-205ENST00000358918 TNRQ92752 1358 aa17.77■□□□□ 0.44
APP-205ENST00000358918 ABCC11Q96J66 1382 aa17.77■□□□□ 0.44
APP-205ENST00000358918 ZSCAN23Q3MJ62 389 aa17.77■□□□□ 0.44
APP-205ENST00000358918 MCTP1Q6DN14 999 aa17.77■□□□□ 0.44
APP-205ENST00000358918 CAVIN1Q6NZI2 390 aaKnown RBP17.77■□□□□ 0.44
APP-205ENST00000358918 TBC1D9Q6ZT07 1266 aa17.77■□□□□ 0.44
APP-205ENST00000358918 RBM42Q9BTD8 480 aaKnown RBP17.77■□□□□ 0.44
APP-205ENST00000358918 CDK19Q9BWU1 502 aa17.77■□□□□ 0.44
APP-205ENST00000358918 NUCB2P80303 420 aa17.76■□□□□ 0.43
APP-205ENST00000358918 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.76■□□□□ 0.43
APP-205ENST00000358918 PDLIM2Q96JY6 352 aa17.76■□□□□ 0.43
APP-205ENST00000358918 USP32Q8NFA0 1604 aa17.76■□□□□ 0.43
APP-205ENST00000358918 ATAD2Q6PL18 1390 aa17.76■□□□□ 0.43
APP-205ENST00000358918 ANKRD45Q5TZF3 282 aa17.75■□□□□ 0.43
APP-205ENST00000358918 XPCQ01831 940 aaPredicted RBP17.75■□□□□ 0.43
APP-205ENST00000358918 DYNC1I1O14576 645 aa17.74■□□□□ 0.43
APP-205ENST00000358918 MCM5P33992 734 aa17.74■□□□□ 0.43
APP-205ENST00000358918 RBSNQ9H1K0 784 aa17.74■□□□□ 0.43
APP-205ENST00000358918 GCC1Q96CN9 775 aa17.74■□□□□ 0.43
APP-205ENST00000358918 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.74■□□□□ 0.43
APP-205ENST00000358918 ZKSCAN5Q9Y2L8 839 aa17.74■□□□□ 0.43
APP-205ENST00000358918 IL16Q14005 1332 aa17.73■□□□□ 0.43
APP-205ENST00000358918 CEBPAP49715 358 aaPredicted RBP17.73■□□□□ 0.43
APP-205ENST00000358918 METP08581 1390 aa17.73■□□□□ 0.43
APP-205ENST00000358918 PLPPR3Q6T4P5 718 aa17.73■□□□□ 0.43
APP-205ENST00000358918 SMAP1Q8IYB5 467 aaPredicted RBP17.73■□□□□ 0.43
APP-205ENST00000358918 GGNBP2Q9H3C7 697 aa17.73■□□□□ 0.43
APP-205ENST00000358918 SETD1AO15047 1707 aaKnown RBP17.72■□□□□ 0.43
APP-205ENST00000358918 NSD2O96028 1365 aa17.72■□□□□ 0.43
APP-205ENST00000358918 TMPOP42166 694 aaKnown RBP17.72■□□□□ 0.43
APP-205ENST00000358918 LMBRD1Q9NUN5 540 aa17.72■□□□□ 0.43
APP-205ENST00000358918 TERF2IPQ9NYB0 399 aa17.72■□□□□ 0.43
APP-205ENST00000358918 CDC45O75419 566 aa17.72■□□□□ 0.43
APP-205ENST00000358918 RABEP1Q15276 862 aa17.72■□□□□ 0.43
APP-205ENST00000358918 CABP1Q9NZU7 370 aa17.72■□□□□ 0.43
APP-205ENST00000358918 NRXN3Q9Y4C0 1643 aa17.71■□□□□ 0.43
APP-205ENST00000358918 TRHP20396 242 aaPredicted RBP17.71■□□□□ 0.43
APP-205ENST00000358918 HDGFP51858 240 aaKnown RBP17.71■□□□□ 0.43
APP-205ENST00000358918 CHMP4BQ9H444 224 aaKnown RBP17.71■□□□□ 0.43
APP-205ENST00000358918 TRIM35Q9UPQ4 493 aa17.71■□□□□ 0.43
APP-205ENST00000358918 PODXL2Q9NZ53 605 aa17.71■□□□□ 0.42
APP-205ENST00000358918 CCDC39Q9UFE4 941 aa17.71■□□□□ 0.42
APP-205ENST00000358918 DLC1Q96QB1 1528 aa17.7■□□□□ 0.42
APP-205ENST00000358918 SASS6Q6UVJ0 657 aa17.7■□□□□ 0.42
APP-205ENST00000358918 TXNDC2Q86VQ3 553 aa17.7■□□□□ 0.42
APP-205ENST00000358918 CD163L1Q9NR16 1453 aa17.7■□□□□ 0.42
APP-205ENST00000358918 PRIM1P49642 420 aaKnown RBP17.69■□□□□ 0.42
APP-205ENST00000358918 ALDH1L2Q3SY69 923 aa17.69■□□□□ 0.42
APP-205ENST00000358918 U2SURPO15042 1029 aaKnown RBP17.69■□□□□ 0.42
APP-205ENST00000358918 HDGFL2Q7Z4V5 671 aaPredicted RBP17.69■□□□□ 0.42
APP-205ENST00000358918 PLEKHF1Q96S99 279 aa17.69■□□□□ 0.42
APP-205ENST00000358918 CYP2E1P05181 493 aaPredicted RBP17.68■□□□□ 0.42
APP-205ENST00000358918 TMEM2Q9UHN6 1383 aa17.68■□□□□ 0.42
APP-205ENST00000358918 PPIP5K1Q6PFW1 1433 aa17.68■□□□□ 0.42
APP-205ENST00000358918 FYB1O15117 783 aa17.68■□□□□ 0.42
APP-205ENST00000358918 CFAP44Q96MT7 982 aa17.68■□□□□ 0.42
APP-205ENST00000358918 CWC22Q9HCG8 908 aaKnown RBP17.67■□□□□ 0.42
APP-205ENST00000358918 MED14O60244 1454 aa17.67■□□□□ 0.42
APP-205ENST00000358918 UBR1Q8IWV7 1749 aa17.66■□□□□ 0.42
APP-205ENST00000358918 PRPF40AO75400 957 aaKnown RBP17.66■□□□□ 0.42
APP-205ENST00000358918 LRSAM1Q6UWE0 723 aa17.65■□□□□ 0.42
APP-205ENST00000358918 RBM27Q9P2N5 1060 aaKnown RBP17.65■□□□□ 0.42
APP-205ENST00000358918 ZBTB7BO15156 539 aaPredicted RBP17.65■□□□□ 0.42
APP-205ENST00000358918 ARID3AQ99856 593 aa17.65■□□□□ 0.42
APP-205ENST00000358918 LTKP29376 864 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms