RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 TNNT3P45378 269 aaPredicted RBP13.87□□□□□ -0.19
PSEN1-202ENST00000357710 GTF2A1P52655 376 aaPredicted RBP13.87□□□□□ -0.19
PSEN1-202ENST00000357710 EIF4G2P78344 907 aaKnown RBP eCLIP13.87□□□□□ -0.19
PSEN1-202ENST00000357710 NBPF9Q3BBW0 867 aa13.87□□□□□ -0.19
PSEN1-202ENST00000357710 HIRIP3Q9BW71 556 aaPredicted RBP13.87□□□□□ -0.19
PSEN1-202ENST00000357710 UPF2Q9HAU5 1272 aaKnown RBP13.87□□□□□ -0.19
PSEN1-202ENST00000357710 RCAN3Q9UKA8 241 aa13.87□□□□□ -0.19
PSEN1-202ENST00000357710 LAMC1P11047 1609 aa13.86□□□□□ -0.19
PSEN1-202ENST00000357710 PDLIM2Q96JY6 352 aa13.86□□□□□ -0.19
PSEN1-202ENST00000357710 BSDC1Q9NW68 430 aaPredicted RBP13.86□□□□□ -0.19
PSEN1-202ENST00000357710 FEZ2Q9UHY8 353 aaPredicted RBP13.86□□□□□ -0.19
PSEN1-202ENST00000357710 PPLO60437 1756 aa13.86□□□□□ -0.19
PSEN1-202ENST00000357710 KIF16BQ96L93 1317 aa13.86□□□□□ -0.19
PSEN1-202ENST00000357710 XPCQ01831 940 aaPredicted RBP13.86□□□□□ -0.19
PSEN1-202ENST00000357710 MAP2K1Q02750 393 aaPredicted RBP13.86□□□□□ -0.19
PSEN1-202ENST00000357710 PDE3BQ13370 1112 aa13.86□□□□□ -0.19
PSEN1-202ENST00000357710 CCDC39Q9UFE4 941 aa13.86□□□□□ -0.19
PSEN1-202ENST00000357710 SIRT1Q96EB6 747 aa13.85□□□□□ -0.19
PSEN1-202ENST00000357710 ROCK2O75116 1388 aaKnown RBP13.85□□□□□ -0.19
PSEN1-202ENST00000357710 SLFN14P0C7P3 912 aa13.85□□□□□ -0.19
PSEN1-202ENST00000357710 CHMP4CQ96CF2 233 aa13.85□□□□□ -0.19
PSEN1-202ENST00000357710 SH3BP1Q9Y3L3 701 aa13.85□□□□□ -0.19
PSEN1-202ENST00000357710 USP19O94966 1318 aa13.85□□□□□ -0.19
PSEN1-202ENST00000357710 CHGAP10645 457 aaKnown RBP13.84□□□□□ -0.19
PSEN1-202ENST00000357710 ZMYM3Q14202 1370 aa13.84□□□□□ -0.19
PSEN1-202ENST00000357710 KIAA1210Q9ULL0 1709 aa13.84□□□□□ -0.19
PSEN1-202ENST00000357710 MNS1Q8NEH6 495 aa13.84□□□□□ -0.19
PSEN1-202ENST00000357710 SLC26A8Q96RN1 970 aa13.84□□□□□ -0.19
PSEN1-202ENST00000357710 HSPA5P11021 654 aaKnown RBP13.83□□□□□ -0.19
PSEN1-202ENST00000357710 NOP2P46087 812 aaKnown RBP13.83□□□□□ -0.19
PSEN1-202ENST00000357710 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.83□□□□□ -0.19
PSEN1-202ENST00000357710 NLRP1Q9C000 1473 aa13.83□□□□□ -0.19
PSEN1-202ENST00000357710 TMEM131LA2VDJ0 1609 aa13.83□□□□□ -0.2
PSEN1-202ENST00000357710 GOLIM4O00461 696 aa13.83□□□□□ -0.2
PSEN1-202ENST00000357710 TMEM132AQ24JP5 1023 aa13.83□□□□□ -0.2
PSEN1-202ENST00000357710 USP47Q96K76 1375 aa13.83□□□□□ -0.2
PSEN1-202ENST00000357710 PRR29P0C7W0 189 aa13.83□□□□□ -0.2
PSEN1-202ENST00000357710 SSR1P43307 286 aaKnown RBP13.83□□□□□ -0.2
PSEN1-202ENST00000357710 GPRASP1Q5JY77 1395 aa13.83□□□□□ -0.2
PSEN1-202ENST00000357710 RPGRIP1LQ68CZ1 1315 aa13.83□□□□□ -0.2
PSEN1-202ENST00000357710 CT47A1Q5JQC4 288 aaPredicted RBP13.82□□□□□ -0.2
PSEN1-202ENST00000357710 FBXO31Q5XUX0 539 aaPredicted RBP13.82□□□□□ -0.2
PSEN1-202ENST00000357710 ICE2Q659A1 982 aa13.82□□□□□ -0.2
PSEN1-202ENST00000357710 NBPF10Q6P3W6 841 aaKnown RBP13.82□□□□□ -0.2
PSEN1-202ENST00000357710 GAS2L3Q86XJ1 694 aa13.82□□□□□ -0.2
PSEN1-202ENST00000357710 PANK3Q9H999 370 aa13.82□□□□□ -0.2
PSEN1-202ENST00000357710 DONSONQ9NYP3 566 aa13.82□□□□□ -0.2
PSEN1-202ENST00000357710 IGSF3O75054 1194 aa13.82□□□□□ -0.2
PSEN1-202ENST00000357710 CALRP27797 417 aaKnown RBP13.82□□□□□ -0.2
PSEN1-202ENST00000357710 OS9Q13438 667 aaPredicted RBP13.82□□□□□ -0.2
PSEN1-202ENST00000357710 ANKRD7Q92527 254 aa13.82□□□□□ -0.2
PSEN1-202ENST00000357710 CARD11Q9BXL7 1154 aa13.82□□□□□ -0.2
PSEN1-202ENST00000357710 MYO5BQ9ULV0 1848 aa13.82□□□□□ -0.2
PSEN1-202ENST00000357710 NEXMIFQ5QGS0 1516 aa13.81□□□□□ -0.2
PSEN1-202ENST00000357710 NRXN1Q9ULB1 1477 aa13.81□□□□□ -0.2
PSEN1-202ENST00000357710 IDI1Q13907 227 aa13.81□□□□□ -0.2
PSEN1-202ENST00000357710 C3P01024 1663 aa13.8□□□□□ -0.2
PSEN1-202ENST00000357710 KIAA2012Q0VF49 1180 aa13.8□□□□□ -0.2
PSEN1-202ENST00000357710 GBP4Q96PP9 640 aa13.8□□□□□ -0.2
PSEN1-202ENST00000357710 GUCY2CP25092 1073 aa13.79□□□□□ -0.2
PSEN1-202ENST00000357710 SYCP1Q15431 976 aa13.79□□□□□ -0.2
PSEN1-202ENST00000357710 TERF2Q15554 542 aa13.79□□□□□ -0.2
PSEN1-202ENST00000357710 GPATCH11Q8N954 259 aa13.79□□□□□ -0.2
PSEN1-202ENST00000357710 TNRQ92752 1358 aa13.79□□□□□ -0.2
PSEN1-202ENST00000357710 KDM5AP29375 1690 aaKnown RBP13.78□□□□□ -0.2
PSEN1-202ENST00000357710 SEMA3FQ13275 785 aa13.78□□□□□ -0.2
PSEN1-202ENST00000357710 ZKSCAN8Q15776 578 aaPredicted RBP13.78□□□□□ -0.2
PSEN1-202ENST00000357710 IRF6O14896 467 aa13.77□□□□□ -0.2
PSEN1-202ENST00000357710 RASSF4Q9H2L5 321 aa13.77□□□□□ -0.2
PSEN1-202ENST00000357710 TERF2IPQ9NYB0 399 aa13.77□□□□□ -0.2
PSEN1-202ENST00000357710 CCDC7Q96M83 1385 aa13.77□□□□□ -0.2
PSEN1-202ENST00000357710 PIK3C2GO75747 1445 aa13.77□□□□□ -0.2
PSEN1-202ENST00000357710 CIZ1Q9ULV3 898 aaPredicted RBP13.77□□□□□ -0.21
PSEN1-202ENST00000357710 IQGAP1P46940 1657 aa13.77□□□□□ -0.21
PSEN1-202ENST00000357710 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
PSEN1-202ENST00000357710 MAFGO15525 162 aa13.77□□□□□ -0.21
PSEN1-202ENST00000357710 DHX16O60231 1041 aaKnown RBP13.77□□□□□ -0.21
PSEN1-202ENST00000357710 NBPF6Q5VWK0 638 aa13.77□□□□□ -0.21
PSEN1-202ENST00000357710 NBPF5PQ86XG9 351 aaPredicted RBP13.77□□□□□ -0.21
PSEN1-202ENST00000357710 NBPF4Q96M43 638 aa13.77□□□□□ -0.21
PSEN1-202ENST00000357710 STAG3Q9UJ98 1225 aa13.77□□□□□ -0.21
PSEN1-202ENST00000357710 RIMS1Q86UR5 1692 aaKnown RBP13.76□□□□□ -0.21
PSEN1-202ENST00000357710 ANAPC15P60006 121 aa13.76□□□□□ -0.21
PSEN1-202ENST00000357710 MED4Q9NPJ6 270 aa13.76□□□□□ -0.21
PSEN1-202ENST00000357710 ZFYVE9O95405 1425 aa13.76□□□□□ -0.21
PSEN1-202ENST00000357710 ADGRF5Q8IZF2 1346 aa13.76□□□□□ -0.21
PSEN1-202ENST00000357710 ZBTB9Q96C00 473 aa13.76□□□□□ -0.21
PSEN1-202ENST00000357710 TBC1D2Q9BYX2 928 aa13.76□□□□□ -0.21
PSEN1-202ENST00000357710 BCL2L12Q9HB09 334 aa13.76□□□□□ -0.21
PSEN1-202ENST00000357710 SETBP1Q9Y6X0 1596 aa13.75□□□□□ -0.21
PSEN1-202ENST00000357710 A2ML1A8K2U0 1454 aa13.75□□□□□ -0.21
PSEN1-202ENST00000357710 ADAMTSL3P82987 1691 aa13.75□□□□□ -0.21
PSEN1-202ENST00000357710 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.75□□□□□ -0.21
PSEN1-202ENST00000357710 ZNF445P59923 1031 aa13.75□□□□□ -0.21
PSEN1-202ENST00000357710 SPINK5Q9NQ38 1064 aaPredicted RBP13.75□□□□□ -0.21
PSEN1-202ENST00000357710 RSPH14Q9UHP6 348 aa13.75□□□□□ -0.21
PSEN1-202ENST00000357710 CC2D2BQ6DHV5 1058 aa13.74□□□□□ -0.21
PSEN1-202ENST00000357710 OTUD6BQ8N6M0 293 aa13.74□□□□□ -0.21
PSEN1-202ENST00000357710 MORC2Q9Y6X9 1032 aaPredicted RBP13.74□□□□□ -0.21
PSEN1-202ENST00000357710 NCOA3Q9Y6Q9 1424 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms