RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 CLASRPQ8N2M8 674 aaKnown RBP6.58□□□□□ -1.36
PTPRD-202ENST00000356435 CCDC69A6NI79 296 aa6.58□□□□□ -1.36
PTPRD-202ENST00000356435 MATR3P43243 847 aaKnown RBP eCLIP6.58□□□□□ -1.36
PTPRD-202ENST00000356435 CRBNQ96SW2 442 aa6.58□□□□□ -1.36
PTPRD-202ENST00000356435 MRE11P49959 708 aa6.58□□□□□ -1.36
PTPRD-202ENST00000356435 ZNHIT6Q9NWK9 470 aaKnown RBP6.58□□□□□ -1.36
PTPRD-202ENST00000356435 KINO60870 393 aaKnown RBP6.58□□□□□ -1.36
PTPRD-202ENST00000356435 DHX8Q14562 1220 aaKnown RBP6.58□□□□□ -1.36
PTPRD-202ENST00000356435 TXNDC2Q86VQ3 553 aa6.58□□□□□ -1.36
PTPRD-202ENST00000356435 CABP2Q9NPB3 220 aa6.58□□□□□ -1.36
PTPRD-202ENST00000356435 SDF4Q9BRK5 362 aa6.57□□□□□ -1.36
PTPRD-202ENST00000356435 DACH1Q9UI36 760 aa6.57□□□□□ -1.36
PTPRD-202ENST00000356435 PPP4R3AQ6IN85 833 aa6.57□□□□□ -1.36
PTPRD-202ENST00000356435 MPHOSPH8Q99549 860 aa6.57□□□□□ -1.36
PTPRD-202ENST00000356435 PDCP20941 246 aa6.57□□□□□ -1.36
PTPRD-202ENST00000356435 BICRAQ9NZM4 1560 aa6.57□□□□□ -1.36
PTPRD-202ENST00000356435 CLCN1P35523 988 aa6.57□□□□□ -1.36
PTPRD-202ENST00000356435 TNIP1Q15025 636 aa6.57□□□□□ -1.36
PTPRD-202ENST00000356435 NOL7Q9UMY1 257 aaKnown RBP6.57□□□□□ -1.36
PTPRD-202ENST00000356435 EZRP15311 586 aaKnown RBP6.57□□□□□ -1.36
PTPRD-202ENST00000356435 ARHGEF12Q9NZN5 1544 aa6.57□□□□□ -1.36
PTPRD-202ENST00000356435 SYNJ2O15056 1496 aa6.57□□□□□ -1.36
PTPRD-202ENST00000356435 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.57□□□□□ -1.36
PTPRD-202ENST00000356435 CDKL5O76039 1030 aa6.57□□□□□ -1.36
PTPRD-202ENST00000356435 PIP4K2BP78356 416 aa6.57□□□□□ -1.36
PTPRD-202ENST00000356435 TEX14Q8IWB6 1497 aa6.57□□□□□ -1.36
PTPRD-202ENST00000356435 SMC2O95347 1197 aa6.56□□□□□ -1.36
PTPRD-202ENST00000356435 SCLT1Q96NL6 688 aa6.56□□□□□ -1.36
PTPRD-202ENST00000356435 KDM4AO75164 1064 aa6.56□□□□□ -1.36
PTPRD-202ENST00000356435 STK38Q15208 465 aa6.56□□□□□ -1.36
PTPRD-202ENST00000356435 SPDYE4A6NLX3 237 aa6.56□□□□□ -1.36
PTPRD-202ENST00000356435 ZNF76P36508 570 aa6.56□□□□□ -1.36
PTPRD-202ENST00000356435 CCDC39Q9UFE4 941 aa6.56□□□□□ -1.36
PTPRD-202ENST00000356435 SEPT7Q16181 437 aaKnown RBP6.56□□□□□ -1.36
PTPRD-202ENST00000356435 GOLGA6L10A6NI86 522 aa6.56□□□□□ -1.36
PTPRD-202ENST00000356435 CCDC97Q96F63 343 aaPredicted RBP6.56□□□□□ -1.36
PTPRD-202ENST00000356435 KIAA1107Q9UPP5 1409 aa6.56□□□□□ -1.36
PTPRD-202ENST00000356435 SNAPC4Q5SXM2 1469 aa6.56□□□□□ -1.36
PTPRD-202ENST00000356435 POTEJP0CG39 1038 aa6.56□□□□□ -1.36
PTPRD-202ENST00000356435 IGHMBP2P38935 993 aaKnown RBP6.56□□□□□ -1.36
PTPRD-202ENST00000356435 ZSCAN29Q8IWY8 852 aaPredicted RBP6.56□□□□□ -1.36
PTPRD-202ENST00000356435 CCDC184Q52MB2 194 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 PAXIP1Q6ZW49 1069 aaPredicted RBP6.55□□□□□ -1.36
PTPRD-202ENST00000356435 PTPRKQ15262 1439 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 KDM5BQ9UGL1 1544 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 GGNBP2Q9H3C7 697 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 BMP2KQ9NSY1 1161 aaPredicted RBP6.55□□□□□ -1.36
PTPRD-202ENST00000356435 TANGO6Q9C0B7 1094 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 PRDM11Q9NQV5 511 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 HECW1Q76N89 1606 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 ABCA5Q8WWZ7 1642 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 SURF6O75683 361 aaKnown RBP6.55□□□□□ -1.36
PTPRD-202ENST00000356435 ZNF530Q6P9A1 599 aaPredicted RBP6.55□□□□□ -1.36
PTPRD-202ENST00000356435 UHRF1BP1Q6BDS2 1440 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 ATP2B1P20020 1258 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 RABEP1Q15276 862 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 ANKLE2Q86XL3 938 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 PPM1FP49593 454 aaPredicted RBP6.55□□□□□ -1.36
PTPRD-202ENST00000356435 VSIG10Q8N0Z9 540 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 ZNF287Q9HBT7 754 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 CWC15Q9P013 229 aaKnown RBP6.55□□□□□ -1.36
PTPRD-202ENST00000356435 ANKRD1Q15327 319 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 TTLL5Q6EMB2 1281 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 TMEM87AQ8NBN3 555 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 GRIN2BQ13224 1484 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 IQCEQ6IPM2 695 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 ZHX3Q9H4I2 956 aa6.55□□□□□ -1.36
PTPRD-202ENST00000356435 CC2D2AQ9P2K1 1620 aa6.54□□□□□ -1.36
PTPRD-202ENST00000356435 WASF1Q92558 559 aa6.54□□□□□ -1.36
PTPRD-202ENST00000356435 ZNF652Q9Y2D9 606 aa6.54□□□□□ -1.36
PTPRD-202ENST00000356435 ANKRD50Q9ULJ7 1429 aa6.54□□□□□ -1.36
PTPRD-202ENST00000356435 GBP2P32456 591 aaPredicted RBP6.54□□□□□ -1.36
PTPRD-202ENST00000356435 DDX54Q8TDD1 881 aaKnown RBP6.54□□□□□ -1.36
PTPRD-202ENST00000356435 DEF6Q9H4E7 631 aa6.54□□□□□ -1.36
PTPRD-202ENST00000356435 FAM13BQ9NYF5 915 aa6.54□□□□□ -1.36
PTPRD-202ENST00000356435 PARD3Q8TEW0 1356 aa6.54□□□□□ -1.36
PTPRD-202ENST00000356435 SUPT6HQ7KZ85 1726 aaKnown RBP6.54□□□□□ -1.36
PTPRD-202ENST00000356435 CCT4P50991 539 aaKnown RBP6.54□□□□□ -1.36
PTPRD-202ENST00000356435 UBAC1Q9BSL1 405 aa6.54□□□□□ -1.36
PTPRD-202ENST00000356435 SEPT11Q9NVA2 429 aaKnown RBP6.54□□□□□ -1.36
PTPRD-202ENST00000356435 RAI14Q9P0K7 980 aa6.54□□□□□ -1.36
PTPRD-202ENST00000356435 UGGT2Q9NYU1 1516 aa6.54□□□□□ -1.36
PTPRD-202ENST00000356435 NEFHP12036 1026 aa6.54□□□□□ -1.36
PTPRD-202ENST00000356435 ENOX2Q16206 610 aaKnown RBP6.54□□□□□ -1.36
PTPRD-202ENST00000356435 NBPF8Q3BBV2 869 aa6.54□□□□□ -1.36
PTPRD-202ENST00000356435 PPP1R12BO60237 982 aaPredicted RBP6.54□□□□□ -1.36
PTPRD-202ENST00000356435 GNAI2P04899 355 aa6.54□□□□□ -1.36
PTPRD-202ENST00000356435 RALGAPBQ86X10 1494 aa6.54□□□□□ -1.36
PTPRD-202ENST00000356435 ANKRD62A6NC57 917 aa6.54□□□□□ -1.36
PTPRD-202ENST00000356435 MCM2P49736 904 aa6.54□□□□□ -1.36
PTPRD-202ENST00000356435 CUL7Q14999 1698 aa6.54□□□□□ -1.36
PTPRD-202ENST00000356435 H0YHG0 523 aa6.54□□□□□ -1.36
PTPRD-202ENST00000356435 TTLL12Q14166 644 aaPredicted RBP6.54□□□□□ -1.36
PTPRD-202ENST00000356435 C22orf23Q9BZE7 217 aa6.54□□□□□ -1.36
PTPRD-202ENST00000356435 PDE3AQ14432 1141 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 NUP133Q8WUM0 1156 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 TERF1P54274 439 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 EHMT1Q9H9B1 1298 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 SEC63Q9UGP8 760 aaKnown RBP6.53□□□□□ -1.36
PTPRD-202ENST00000356435 ZPR1O75312 459 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms