RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 OLFM4Q6UX06 510 aa13.48□□□□□ -0.25
FN1-204ENST00000356005 TEX13AQ9BXU3 409 aaPredicted RBP13.48□□□□□ -0.25
FN1-204ENST00000356005 KIF7Q2M1P5 1343 aa13.48□□□□□ -0.25
FN1-204ENST00000356005 MCM2P49736 904 aa13.48□□□□□ -0.25
FN1-204ENST00000356005 CCDC73Q6ZRK6 1079 aa13.48□□□□□ -0.25
FN1-204ENST00000356005 MPHOSPH10O00566 681 aaKnown RBP13.48□□□□□ -0.25
FN1-204ENST00000356005 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.48□□□□□ -0.25
FN1-204ENST00000356005 CAVIN4Q5BKX8 364 aa13.48□□□□□ -0.25
FN1-204ENST00000356005 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
FN1-204ENST00000356005 ANKRD1Q15327 319 aa13.47□□□□□ -0.25
FN1-204ENST00000356005 NUCB2P80303 420 aa13.47□□□□□ -0.25
FN1-204ENST00000356005 TRIM22Q8IYM9 498 aa13.47□□□□□ -0.25
FN1-204ENST00000356005 AKAP2Q9Y2D5 859 aa13.47□□□□□ -0.25
FN1-204ENST00000356005 SASS6Q6UVJ0 657 aa13.47□□□□□ -0.25
FN1-204ENST00000356005 URB2Q14146 1524 aaKnown RBP13.47□□□□□ -0.25
FN1-204ENST00000356005 DNAJC2Q99543 621 aaKnown RBP13.47□□□□□ -0.25
FN1-204ENST00000356005 ZNF518AQ6AHZ1 1483 aa13.46□□□□□ -0.25
FN1-204ENST00000356005 DUOX2Q9NRD8 1548 aa13.46□□□□□ -0.25
FN1-204ENST00000356005 SLC4A3P48751 1232 aa13.46□□□□□ -0.25
FN1-204ENST00000356005 FOXD4L5Q5VV16 416 aaPredicted RBP13.46□□□□□ -0.25
FN1-204ENST00000356005 FOXD4L4Q8WXT5 416 aaPredicted RBP13.46□□□□□ -0.25
FN1-204ENST00000356005 UBAP1LF5GYI3 381 aa13.46□□□□□ -0.25
FN1-204ENST00000356005 AMER1Q5JTC6 1135 aaPredicted RBP13.46□□□□□ -0.25
FN1-204ENST00000356005 CEP126Q9P2H0 1117 aa13.46□□□□□ -0.25
FN1-204ENST00000356005 TNRQ92752 1358 aa13.46□□□□□ -0.25
FN1-204ENST00000356005 SLC12A5Q9H2X9 1139 aa13.46□□□□□ -0.25
FN1-204ENST00000356005 AMOTL2Q9Y2J4 779 aa13.46□□□□□ -0.25
FN1-204ENST00000356005 TCP11L2Q8N4U5 519 aa13.46□□□□□ -0.25
FN1-204ENST00000356005 OFD1O75665 1012 aa13.46□□□□□ -0.26
FN1-204ENST00000356005 WDR63Q8IWG1 891 aa13.46□□□□□ -0.26
FN1-204ENST00000356005 FCHSD2O94868 740 aa13.46□□□□□ -0.26
FN1-204ENST00000356005 RRP12Q5JTH9 1297 aaKnown RBP13.46□□□□□ -0.26
FN1-204ENST00000356005 MYO5CQ9NQX4 1742 aa13.45□□□□□ -0.26
FN1-204ENST00000356005 MAP3K1Q13233 1512 aa13.45□□□□□ -0.26
FN1-204ENST00000356005 SLC4A2P04920 1241 aa13.45□□□□□ -0.26
FN1-204ENST00000356005 ANKIB1Q9P2G1 1089 aa13.45□□□□□ -0.26
FN1-204ENST00000356005 A0A087WZG4 1122 aa13.45□□□□□ -0.26
FN1-204ENST00000356005 GPS2Q13227 327 aa13.45□□□□□ -0.26
FN1-204ENST00000356005 CCDC173Q0VFZ6 552 aa13.45□□□□□ -0.26
FN1-204ENST00000356005 SOGA3Q5TF21 947 aa13.45□□□□□ -0.26
FN1-204ENST00000356005 MTMR7Q9Y216 660 aa13.45□□□□□ -0.26
FN1-204ENST00000356005 DDX49Q9Y6V7 483 aaKnown RBP13.45□□□□□ -0.26
FN1-204ENST00000356005 SYCP1Q15431 976 aa13.45□□□□□ -0.26
FN1-204ENST00000356005 XPCQ01831 940 aaPredicted RBP13.44□□□□□ -0.26
FN1-204ENST00000356005 GCC1Q96CN9 775 aa13.44□□□□□ -0.26
FN1-204ENST00000356005 CTNNA3Q9UI47 895 aa13.44□□□□□ -0.26
FN1-204ENST00000356005 PHF8Q9UPP1 1060 aa13.44□□□□□ -0.26
FN1-204ENST00000356005 AK7Q96M32 723 aa13.44□□□□□ -0.26
FN1-204ENST00000356005 CCDC69A6NI79 296 aa13.44□□□□□ -0.26
FN1-204ENST00000356005 CDC45O75419 566 aa13.44□□□□□ -0.26
FN1-204ENST00000356005 PAF1Q8N7H5 531 aa13.44□□□□□ -0.26
FN1-204ENST00000356005 JMYQ8N9B5 988 aa13.44□□□□□ -0.26
FN1-204ENST00000356005 IPO9Q96P70 1041 aaKnown RBP13.44□□□□□ -0.26
FN1-204ENST00000356005 LRP2BPQ9P2M1 347 aa13.44□□□□□ -0.26
FN1-204ENST00000356005 KDM5BQ9UGL1 1544 aa13.44□□□□□ -0.26
FN1-204ENST00000356005 MYO6Q9UM54 1294 aa13.44□□□□□ -0.26
FN1-204ENST00000356005 VPS37CA5D8V6 355 aaPredicted RBP13.43□□□□□ -0.26
FN1-204ENST00000356005 DESP17661 470 aa13.43□□□□□ -0.26
FN1-204ENST00000356005 PPP2R1AP30153 589 aa13.43□□□□□ -0.26
FN1-204ENST00000356005 TNIP1Q15025 636 aa13.43□□□□□ -0.26
FN1-204ENST00000356005 WDR97A6NE52 1622 aa13.43□□□□□ -0.26
FN1-204ENST00000356005 CDKL5O76039 1030 aa13.43□□□□□ -0.26
FN1-204ENST00000356005 KRT18P05783 430 aaKnown RBP13.43□□□□□ -0.26
FN1-204ENST00000356005 PIP4K2AP48426 406 aaPredicted RBP13.43□□□□□ -0.26
FN1-204ENST00000356005 CHMP5Q9NZZ3 219 aa13.43□□□□□ -0.26
FN1-204ENST00000356005 EIF2AK4Q9P2K8 1649 aaKnown RBP13.43□□□□□ -0.26
FN1-204ENST00000356005 LARP1Q6PKG0 1096 aaKnown RBP13.43□□□□□ -0.26
FN1-204ENST00000356005 LRRCC1Q9C099 1032 aa13.43□□□□□ -0.26
FN1-204ENST00000356005 LNPKQ9C0E8 428 aa13.43□□□□□ -0.26
FN1-204ENST00000356005 KIF1BO60333 1816 aa13.43□□□□□ -0.26
FN1-204ENST00000356005 ST5P78524 1137 aa13.42□□□□□ -0.26
FN1-204ENST00000356005 TTLL12Q14166 644 aaPredicted RBP13.42□□□□□ -0.26
FN1-204ENST00000356005 KRT28Q7Z3Y7 464 aa13.42□□□□□ -0.26
FN1-204ENST00000356005 NPHP3Q7Z494 1330 aa13.42□□□□□ -0.26
FN1-204ENST00000356005 TTC21BQ7Z4L5 1316 aa13.42□□□□□ -0.26
FN1-204ENST00000356005 C16orf71Q8IYS4 520 aaPredicted RBP13.42□□□□□ -0.26
FN1-204ENST00000356005 ATF7IPQ6VMQ6 1270 aa13.42□□□□□ -0.26
FN1-204ENST00000356005 WDR7Q9Y4E6 1490 aa13.42□□□□□ -0.26
FN1-204ENST00000356005 ASXL2Q76L83 1435 aa13.42□□□□□ -0.26
FN1-204ENST00000356005 MAGEC2Q9UBF1 373 aaPredicted RBP13.41□□□□□ -0.26
FN1-204ENST00000356005 NSD3Q9BZ95 1437 aa13.41□□□□□ -0.26
FN1-204ENST00000356005 TDO2P48775 406 aa13.41□□□□□ -0.26
FN1-204ENST00000356005 ZNF396Q96N95 335 aaPredicted RBP13.41□□□□□ -0.26
FN1-204ENST00000356005 STIM1Q13586 685 aa13.41□□□□□ -0.26
FN1-204ENST00000356005 ZFYVE27Q5T4F4 411 aa13.41□□□□□ -0.26
FN1-204ENST00000356005 UHRF1BP1LA0JNW5 1464 aa13.41□□□□□ -0.26
FN1-204ENST00000356005 IFIT1P09914 478 aaKnown RBP13.41□□□□□ -0.26
FN1-204ENST00000356005 PAXIP1Q6ZW49 1069 aaPredicted RBP13.41□□□□□ -0.26
FN1-204ENST00000356005 BICDL1Q6ZP65 573 aa13.41□□□□□ -0.26
FN1-204ENST00000356005 MPRIPQ6WCQ1 1025 aa13.4□□□□□ -0.26
FN1-204ENST00000356005 FKBP4Q02790 459 aaKnown RBP eCLIP13.4□□□□□ -0.26
FN1-204ENST00000356005 RFC4P35249 363 aa13.4□□□□□ -0.26
FN1-204ENST00000356005 RRS1Q15050 365 aaKnown RBP13.4□□□□□ -0.26
FN1-204ENST00000356005 MPHOSPH6Q99547 160 aaKnown RBP13.4□□□□□ -0.26
FN1-204ENST00000356005 FOXO3O43524 673 aa13.4□□□□□ -0.26
FN1-204ENST00000356005 PDIA4P13667 645 aaKnown RBP13.4□□□□□ -0.26
FN1-204ENST00000356005 NAP1L1P55209 391 aaKnown RBP13.4□□□□□ -0.26
FN1-204ENST00000356005 MYO1BO43795 1136 aa13.39□□□□□ -0.27
FN1-204ENST00000356005 HYPKQ9NX55 129 aa13.39□□□□□ -0.27
FN1-204ENST00000356005 NCOA1Q15788 1441 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms