RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 JMYQ8N9B5 988 aa13.53□□□□□ -0.24
NUDCD3-202ENST00000355451 ODF2LQ9ULJ1 636 aa13.53□□□□□ -0.24
NUDCD3-202ENST00000355451 MINK1Q8N4C8 1332 aaPredicted RBP13.53□□□□□ -0.24
NUDCD3-202ENST00000355451 KIAA1328Q86T90 577 aa13.53□□□□□ -0.24
NUDCD3-202ENST00000355451 NOC2LQ9Y3T9 749 aaKnown RBP13.53□□□□□ -0.24
NUDCD3-202ENST00000355451 ZKSCAN2Q63HK3 967 aa13.53□□□□□ -0.24
NUDCD3-202ENST00000355451 ZNF396Q96N95 335 aaPredicted RBP13.53□□□□□ -0.24
NUDCD3-202ENST00000355451 BICDL1Q6ZP65 573 aa13.53□□□□□ -0.24
NUDCD3-202ENST00000355451 LRRCC1Q9C099 1032 aa13.53□□□□□ -0.24
NUDCD3-202ENST00000355451 NOL7Q9UMY1 257 aaKnown RBP13.53□□□□□ -0.24
NUDCD3-202ENST00000355451 UBTFL1P0CB47 393 aaPredicted RBP13.53□□□□□ -0.24
NUDCD3-202ENST00000355451 DDX54Q8TDD1 881 aaKnown RBP13.52□□□□□ -0.24
NUDCD3-202ENST00000355451 NDC80O14777 642 aa13.52□□□□□ -0.25
NUDCD3-202ENST00000355451 ZNF397Q8NF99 534 aaPredicted RBP13.52□□□□□ -0.25
NUDCD3-202ENST00000355451 UBA5Q9GZZ9 404 aa13.52□□□□□ -0.25
NUDCD3-202ENST00000355451 STK38Q15208 465 aa13.52□□□□□ -0.25
NUDCD3-202ENST00000355451 FAM177A1Q8N128 213 aaPredicted RBP13.52□□□□□ -0.25
NUDCD3-202ENST00000355451 NUP155O75694 1391 aa13.51□□□□□ -0.25
NUDCD3-202ENST00000355451 SMG6Q86US8 1419 aaKnown RBP13.51□□□□□ -0.25
NUDCD3-202ENST00000355451 KIF7Q2M1P5 1343 aa13.51□□□□□ -0.25
NUDCD3-202ENST00000355451 TDO2P48775 406 aa13.51□□□□□ -0.25
NUDCD3-202ENST00000355451 CCDC117Q8IWD4 279 aaPredicted RBP13.51□□□□□ -0.25
NUDCD3-202ENST00000355451 SREK1Q8WXA9 508 aaKnown RBP13.51□□□□□ -0.25
NUDCD3-202ENST00000355451 CUL5Q93034 780 aa13.51□□□□□ -0.25
NUDCD3-202ENST00000355451 BEGAINQ9BUH8 593 aa13.51□□□□□ -0.25
NUDCD3-202ENST00000355451 APBB1IPQ7Z5R6 666 aaPredicted RBP13.5□□□□□ -0.25
NUDCD3-202ENST00000355451 UTP14AQ9BVJ6 771 aaKnown RBP13.5□□□□□ -0.25
NUDCD3-202ENST00000355451 TOM1L2Q6ZVM7 507 aa13.5□□□□□ -0.25
NUDCD3-202ENST00000355451 ZNF287Q9HBT7 754 aa13.5□□□□□ -0.25
NUDCD3-202ENST00000355451 CYB5RLQ6IPT4 315 aa13.5□□□□□ -0.25
NUDCD3-202ENST00000355451 CCDC89Q8N998 374 aa13.49□□□□□ -0.25
NUDCD3-202ENST00000355451 PUF60Q9UHX1 559 aaKnown RBP13.49□□□□□ -0.25
NUDCD3-202ENST00000355451 CCDC66A2RUB6 948 aa13.49□□□□□ -0.25
NUDCD3-202ENST00000355451 RNF187Q5TA31 235 aaPredicted RBP13.49□□□□□ -0.25
NUDCD3-202ENST00000355451 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.49□□□□□ -0.25
NUDCD3-202ENST00000355451 ZBTB24O43167 697 aaPredicted RBP13.49□□□□□ -0.25
NUDCD3-202ENST00000355451 ZPR1O75312 459 aa13.49□□□□□ -0.25
NUDCD3-202ENST00000355451 EHMT1Q9H9B1 1298 aa13.49□□□□□ -0.25
NUDCD3-202ENST00000355451 ANKIB1Q9P2G1 1089 aa13.49□□□□□ -0.25
NUDCD3-202ENST00000355451 EIF5P55010 431 aaKnown RBP13.49□□□□□ -0.25
NUDCD3-202ENST00000355451 GPRASP1Q5JY77 1395 aa13.49□□□□□ -0.25
NUDCD3-202ENST00000355451 CEP135Q66GS9 1140 aa13.49□□□□□ -0.25
NUDCD3-202ENST00000355451 PPP1R14CQ8TAE6 165 aa13.48□□□□□ -0.25
NUDCD3-202ENST00000355451 UBAC1Q9BSL1 405 aa13.48□□□□□ -0.25
NUDCD3-202ENST00000355451 TRMT1LQ7Z2T5 733 aaKnown RBP13.48□□□□□ -0.25
NUDCD3-202ENST00000355451 PSMC4P43686 418 aa13.48□□□□□ -0.25
NUDCD3-202ENST00000355451 XPCQ01831 940 aaPredicted RBP13.48□□□□□ -0.25
NUDCD3-202ENST00000355451 CABP4P57796 275 aa13.48□□□□□ -0.25
NUDCD3-202ENST00000355451 DZIP1Q86YF9 867 aaKnown RBP13.48□□□□□ -0.25
NUDCD3-202ENST00000355451 CEP57L1Q8IYX8 460 aa13.48□□□□□ -0.25
NUDCD3-202ENST00000355451 ZNF219Q9P2Y4 722 aaPredicted RBP13.47□□□□□ -0.25
NUDCD3-202ENST00000355451 HIP1O00291 1037 aa13.47□□□□□ -0.25
NUDCD3-202ENST00000355451 LRP2BPQ9P2M1 347 aa13.47□□□□□ -0.25
NUDCD3-202ENST00000355451 IL27Q8NEV9 243 aa13.47□□□□□ -0.25
NUDCD3-202ENST00000355451 ECM2O94769 699 aaPredicted RBP13.47□□□□□ -0.25
NUDCD3-202ENST00000355451 GCOM1H8Y6P7 765 aaPredicted RBP13.47□□□□□ -0.25
NUDCD3-202ENST00000355451 MYZAPP0CAP1 466 aa13.47□□□□□ -0.25
NUDCD3-202ENST00000355451 SNX16P57768 344 aa13.47□□□□□ -0.25
NUDCD3-202ENST00000355451 ESCO1Q5FWF5 840 aa13.47□□□□□ -0.25
NUDCD3-202ENST00000355451 SEPT10Q9P0V9 454 aa13.47□□□□□ -0.25
NUDCD3-202ENST00000355451 ABTB2Q8N961 1025 aa13.47□□□□□ -0.25
NUDCD3-202ENST00000355451 RAI14Q9P0K7 980 aa13.47□□□□□ -0.25
NUDCD3-202ENST00000355451 CIZ1Q9ULV3 898 aaPredicted RBP13.47□□□□□ -0.25
NUDCD3-202ENST00000355451 KIF27Q86VH2 1401 aa13.47□□□□□ -0.25
NUDCD3-202ENST00000355451 VPS36Q86VN1 386 aa13.46□□□□□ -0.25
NUDCD3-202ENST00000355451 SYNCQ9H7C4 482 aa13.46□□□□□ -0.25
NUDCD3-202ENST00000355451 POLR3DP05423 398 aaPredicted RBP13.46□□□□□ -0.25
NUDCD3-202ENST00000355451 TNNT1P13805 278 aa13.46□□□□□ -0.25
NUDCD3-202ENST00000355451 SEPT6Q14141 434 aa13.46□□□□□ -0.25
NUDCD3-202ENST00000355451 CCDC178Q5BJE1 867 aa13.46□□□□□ -0.25
NUDCD3-202ENST00000355451 EP400NLQ6ZTU2 488 aa13.46□□□□□ -0.25
NUDCD3-202ENST00000355451 SATB1Q01826 763 aa13.46□□□□□ -0.25
NUDCD3-202ENST00000355451 FKBP4Q02790 459 aaKnown RBP eCLIP13.46□□□□□ -0.25
NUDCD3-202ENST00000355451 API5Q9BZZ5 524 aaKnown RBP13.46□□□□□ -0.25
NUDCD3-202ENST00000355451 VGFO15240 615 aaPredicted RBP13.46□□□□□ -0.26
NUDCD3-202ENST00000355451 NUCB2P80303 420 aa13.46□□□□□ -0.26
NUDCD3-202ENST00000355451 IFFO1Q0D2I5 559 aa13.46□□□□□ -0.26
NUDCD3-202ENST00000355451 ZSCAN25Q6NSZ9 544 aa13.46□□□□□ -0.26
NUDCD3-202ENST00000355451 SPINK5Q9NQ38 1064 aaPredicted RBP13.46□□□□□ -0.26
NUDCD3-202ENST00000355451 PRC1O43663 620 aa13.45□□□□□ -0.26
NUDCD3-202ENST00000355451 DDX19BQ9UMR2 479 aa13.45□□□□□ -0.26
NUDCD3-202ENST00000355451 UACAQ9BZF9 1416 aa13.45□□□□□ -0.26
NUDCD3-202ENST00000355451 HSPA5P11021 654 aaKnown RBP13.45□□□□□ -0.26
NUDCD3-202ENST00000355451 RIPK4P57078 832 aa13.45□□□□□ -0.26
NUDCD3-202ENST00000355451 GSE1Q14687 1217 aa13.45□□□□□ -0.26
NUDCD3-202ENST00000355451 CFAP58Q5T655 872 aa13.45□□□□□ -0.26
NUDCD3-202ENST00000355451 PDCP20941 246 aa13.45□□□□□ -0.26
NUDCD3-202ENST00000355451 CCDC96Q2M329 555 aa13.45□□□□□ -0.26
NUDCD3-202ENST00000355451 ZNF428Q96B54 188 aa13.45□□□□□ -0.26
NUDCD3-202ENST00000355451 RIOK3O14730 519 aaKnown RBP13.45□□□□□ -0.26
NUDCD3-202ENST00000355451 IKBKGQ9Y6K9 419 aa13.45□□□□□ -0.26
NUDCD3-202ENST00000355451 DIAPH1O60610 1272 aaKnown RBP13.45□□□□□ -0.26
NUDCD3-202ENST00000355451 USP8P40818 1118 aa13.45□□□□□ -0.26
NUDCD3-202ENST00000355451 CPLX3Q8WVH0 158 aa13.45□□□□□ -0.26
NUDCD3-202ENST00000355451 TICAM2Q86XR7 235 aa13.45□□□□□ -0.26
NUDCD3-202ENST00000355451 SAMM50Q9Y512 469 aa13.45□□□□□ -0.26
NUDCD3-202ENST00000355451 PHLDB1Q86UU1 1377 aa13.44□□□□□ -0.26
NUDCD3-202ENST00000355451 ACTN2P35609 894 aa13.44□□□□□ -0.26
NUDCD3-202ENST00000355451 ALS2CR12Q96Q35 445 aa13.44□□□□□ -0.26
NUDCD3-202ENST00000355451 LETM1O95202 739 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms