RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 ABCC11Q96J66 1382 aa19.55■□□□□ 0.72
SHTN1-202ENST00000355371 SLC26A8Q96RN1 970 aa19.55■□□□□ 0.72
SHTN1-202ENST00000355371 K7ELQ4 463 aaPredicted RBP19.55■□□□□ 0.72
SHTN1-202ENST00000355371 KINO60870 393 aaKnown RBP19.55■□□□□ 0.72
SHTN1-202ENST00000355371 CAVIN1Q6NZI2 390 aaKnown RBP19.55■□□□□ 0.72
SHTN1-202ENST00000355371 CCDC43Q96MW1 224 aaKnown RBP19.55■□□□□ 0.72
SHTN1-202ENST00000355371 STRN4Q9NRL3 753 aa19.54■□□□□ 0.72
SHTN1-202ENST00000355371 CD109Q6YHK3 1445 aa19.53■□□□□ 0.72
SHTN1-202ENST00000355371 TOM1L2Q6ZVM7 507 aa19.53■□□□□ 0.72
SHTN1-202ENST00000355371 TSPY26PQ9H489 355 aa19.53■□□□□ 0.72
SHTN1-202ENST00000355371 PRPF40AO75400 957 aaKnown RBP19.53■□□□□ 0.72
SHTN1-202ENST00000355371 BICRAQ9NZM4 1560 aa19.53■□□□□ 0.72
SHTN1-202ENST00000355371 KCNH5Q8NCM2 988 aa19.52■□□□□ 0.72
SHTN1-202ENST00000355371 NCOA1Q15788 1441 aa19.52■□□□□ 0.72
SHTN1-202ENST00000355371 ADGRL1O94910 1474 aa19.52■□□□□ 0.72
SHTN1-202ENST00000355371 BTBD11A6QL63 1104 aa19.52■□□□□ 0.71
SHTN1-202ENST00000355371 WDR33Q9C0J8 1336 aaKnown RBP19.52■□□□□ 0.71
SHTN1-202ENST00000355371 GNAT3A8MTJ3 354 aa19.51■□□□□ 0.71
SHTN1-202ENST00000355371 ZSCAN25Q6NSZ9 544 aa19.51■□□□□ 0.71
SHTN1-202ENST00000355371 ALDH1L2Q3SY69 923 aa19.51■□□□□ 0.71
SHTN1-202ENST00000355371 FAM135AQ9P2D6 1515 aa19.5■□□□□ 0.71
SHTN1-202ENST00000355371 ARGLU1Q9NWB6 273 aaPredicted RBP19.5■□□□□ 0.71
SHTN1-202ENST00000355371 SRGAP3O43295 1099 aa19.5■□□□□ 0.71
SHTN1-202ENST00000355371 CIZ1Q9ULV3 898 aaPredicted RBP19.5■□□□□ 0.71
SHTN1-202ENST00000355371 MNS1Q8NEH6 495 aa19.5■□□□□ 0.71
SHTN1-202ENST00000355371 JMYQ8N9B5 988 aa19.49■□□□□ 0.71
SHTN1-202ENST00000355371 RNF214Q8ND24 703 aa19.49■□□□□ 0.71
SHTN1-202ENST00000355371 NACAP1Q9BZK3 213 aa19.49■□□□□ 0.71
SHTN1-202ENST00000355371 FAM177BA6PVY3 158 aa19.49■□□□□ 0.71
SHTN1-202ENST00000355371 TEX35Q5T0J7 233 aa19.48■□□□□ 0.71
SHTN1-202ENST00000355371 TMEM57Q8N5G2 664 aa19.48■□□□□ 0.71
SHTN1-202ENST00000355371 STK38Q15208 465 aa19.48■□□□□ 0.71
SHTN1-202ENST00000355371 CCDC57Q2TAC2 916 aa19.48■□□□□ 0.71
SHTN1-202ENST00000355371 SIL1Q9H173 461 aa19.48■□□□□ 0.71
SHTN1-202ENST00000355371 RPRD2Q5VT52 1461 aaKnown RBP19.48■□□□□ 0.71
SHTN1-202ENST00000355371 AACSQ86V21 672 aa19.48■□□□□ 0.71
SHTN1-202ENST00000355371 TRIM5Q9C035 493 aa19.48■□□□□ 0.71
SHTN1-202ENST00000355371 PEG3Q9GZU2 1588 aa19.48■□□□□ 0.71
SHTN1-202ENST00000355371 FIBPO43427 364 aa19.47■□□□□ 0.71
SHTN1-202ENST00000355371 CCDC173Q0VFZ6 552 aa19.47■□□□□ 0.71
SHTN1-202ENST00000355371 ZSCAN31Q96LW9 406 aaPredicted RBP19.47■□□□□ 0.71
SHTN1-202ENST00000355371 PDIA4P13667 645 aaKnown RBP19.47■□□□□ 0.71
SHTN1-202ENST00000355371 MYL6BP14649 208 aa19.47■□□□□ 0.71
SHTN1-202ENST00000355371 TXLNAP40222 546 aa19.47■□□□□ 0.71
SHTN1-202ENST00000355371 NKTRP30414 1462 aaKnown RBP19.47■□□□□ 0.71
SHTN1-202ENST00000355371 DDX54Q8TDD1 881 aaKnown RBP19.47■□□□□ 0.71
SHTN1-202ENST00000355371 FAM13BQ9NYF5 915 aa19.46■□□□□ 0.71
SHTN1-202ENST00000355371 PRDM11Q9NQV5 511 aa19.46■□□□□ 0.71
SHTN1-202ENST00000355371 SCAF11Q99590 1463 aaKnown RBP19.46■□□□□ 0.71
SHTN1-202ENST00000355371 NSD2O96028 1365 aa19.46■□□□□ 0.71
SHTN1-202ENST00000355371 PIP4K2AP48426 406 aaPredicted RBP19.45■□□□□ 0.7
SHTN1-202ENST00000355371 DHX8Q14562 1220 aaKnown RBP19.45■□□□□ 0.7
SHTN1-202ENST00000355371 ACBD3Q9H3P7 528 aa19.45■□□□□ 0.7
SHTN1-202ENST00000355371 C11orf95C9JLR9 678 aaPredicted RBP19.45■□□□□ 0.7
SHTN1-202ENST00000355371 KRT32Q14532 448 aa19.45■□□□□ 0.7
SHTN1-202ENST00000355371 RRP12Q5JTH9 1297 aaKnown RBP19.45■□□□□ 0.7
SHTN1-202ENST00000355371 BIVM-ERCC5R4GMW8 1640 aa19.45■□□□□ 0.7
SHTN1-202ENST00000355371 SETQ01105 290 aaPredicted RBP19.45■□□□□ 0.7
SHTN1-202ENST00000355371 TRIM22Q8IYM9 498 aa19.45■□□□□ 0.7
SHTN1-202ENST00000355371 CCP110O43303 1012 aa19.44■□□□□ 0.7
SHTN1-202ENST00000355371 RARSP54136 660 aaKnown RBP19.44■□□□□ 0.7
SHTN1-202ENST00000355371 PRM3Q9NNZ6 103 aa19.44■□□□□ 0.7
SHTN1-202ENST00000355371 CTNNA3Q9UI47 895 aa19.44■□□□□ 0.7
SHTN1-202ENST00000355371 BLOC1S2Q6QNY1 142 aa19.44■□□□□ 0.7
SHTN1-202ENST00000355371 PDILTQ8N807 584 aa19.44■□□□□ 0.7
SHTN1-202ENST00000355371 KRT85P78386 507 aa19.44■□□□□ 0.7
SHTN1-202ENST00000355371 DUSP27Q5VZP5 1158 aa19.44■□□□□ 0.7
SHTN1-202ENST00000355371 FILIP1LQ4L180 1135 aa19.43■□□□□ 0.7
SHTN1-202ENST00000355371 EPS15P42566 896 aa19.43■□□□□ 0.7
SHTN1-202ENST00000355371 NAP1L1P55209 391 aaKnown RBP19.43■□□□□ 0.7
SHTN1-202ENST00000355371 CEP126Q9P2H0 1117 aa19.43■□□□□ 0.7
SHTN1-202ENST00000355371 RAB11FIP3O75154 756 aa19.43■□□□□ 0.7
SHTN1-202ENST00000355371 CCDC192P0DO97 292 aa19.43■□□□□ 0.7
SHTN1-202ENST00000355371 MPHOSPH8Q99549 860 aa19.43■□□□□ 0.7
SHTN1-202ENST00000355371 WAPLQ7Z5K2 1190 aa19.43■□□□□ 0.7
SHTN1-202ENST00000355371 PDRG1Q9NUG6 133 aa19.42■□□□□ 0.7
SHTN1-202ENST00000355371 MAP4K4O95819 1239 aaPredicted RBP19.42■□□□□ 0.7
SHTN1-202ENST00000355371 ZNF771Q7L3S4 317 aaPredicted RBP19.42■□□□□ 0.7
SHTN1-202ENST00000355371 PPP6R1Q9UPN7 881 aa19.42■□□□□ 0.7
SHTN1-202ENST00000355371 LARP1BQ659C4 914 aaKnown RBP19.41■□□□□ 0.7
SHTN1-202ENST00000355371 ADGRF5Q8IZF2 1346 aa19.41■□□□□ 0.7
SHTN1-202ENST00000355371 SMC2O95347 1197 aa19.41■□□□□ 0.7
SHTN1-202ENST00000355371 IKQ13123 557 aaPredicted RBP19.41■□□□□ 0.7
SHTN1-202ENST00000355371 MTMR7Q9Y216 660 aa19.41■□□□□ 0.7
SHTN1-202ENST00000355371 OFD1O75665 1012 aa19.41■□□□□ 0.7
SHTN1-202ENST00000355371 ATP2B1P20020 1258 aa19.41■□□□□ 0.7
SHTN1-202ENST00000355371 CDKL5O76039 1030 aa19.41■□□□□ 0.7
SHTN1-202ENST00000355371 KIF1BPQ96EK5 621 aa19.41■□□□□ 0.7
SHTN1-202ENST00000355371 AMOTQ4VCS5 1084 aa19.4■□□□□ 0.7
SHTN1-202ENST00000355371 MTERF4Q7Z6M4 381 aaKnown RBP19.4■□□□□ 0.7
SHTN1-202ENST00000355371 SMARCE1Q969G3 411 aa19.4■□□□□ 0.7
SHTN1-202ENST00000355371 CCDC69A6NI79 296 aa19.4■□□□□ 0.7
SHTN1-202ENST00000355371 SSH1Q8WYL5 1049 aa19.4■□□□□ 0.7
SHTN1-202ENST00000355371 CDK5RAP3Q96JB5 506 aa19.4■□□□□ 0.7
SHTN1-202ENST00000355371 URB2Q14146 1524 aaKnown RBP19.4■□□□□ 0.7
SHTN1-202ENST00000355371 KDM4AO75164 1064 aa19.4■□□□□ 0.7
SHTN1-202ENST00000355371 AK7Q96M32 723 aa19.39■□□□□ 0.7
SHTN1-202ENST00000355371 RUFY1Q96T51 708 aa19.39■□□□□ 0.7
SHTN1-202ENST00000355371 ANO8Q9HCE9 1232 aaPredicted RBP19.39■□□□□ 0.7
SHTN1-202ENST00000355371 IL1RAPL2Q9NP60 686 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms