RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 PRDM11Q9NQV5 511 aa15.74■□□□□ 0.11
SCN8A-202ENST00000355133 PDE3AQ14432 1141 aa15.74■□□□□ 0.11
SCN8A-202ENST00000355133 NBPF8Q3BBV2 869 aa15.74■□□□□ 0.11
SCN8A-202ENST00000355133 HFM1A2PYH4 1435 aa15.74■□□□□ 0.11
SCN8A-202ENST00000355133 NACAP1Q9BZK3 213 aa15.74■□□□□ 0.11
SCN8A-202ENST00000355133 MCM2P49736 904 aa15.74■□□□□ 0.11
SCN8A-202ENST00000355133 NUP133Q8WUM0 1156 aa15.74■□□□□ 0.11
SCN8A-202ENST00000355133 CDR1P51861 262 aa15.74■□□□□ 0.11
SCN8A-202ENST00000355133 CCDC173Q0VFZ6 552 aa15.74■□□□□ 0.11
SCN8A-202ENST00000355133 BTBD11A6QL63 1104 aa15.73■□□□□ 0.11
SCN8A-202ENST00000355133 LETM1O95202 739 aaPredicted RBP15.73■□□□□ 0.11
SCN8A-202ENST00000355133 AACSQ86V21 672 aa15.73■□□□□ 0.11
SCN8A-202ENST00000355133 TSPY26PQ9H489 355 aa15.73■□□□□ 0.11
SCN8A-202ENST00000355133 ANKLE2Q86XL3 938 aa15.73■□□□□ 0.11
SCN8A-202ENST00000355133 CCDC69A6NI79 296 aa15.73■□□□□ 0.11
SCN8A-202ENST00000355133 MRE11P49959 708 aa15.73■□□□□ 0.11
SCN8A-202ENST00000355133 FILIP1LQ4L180 1135 aa15.73■□□□□ 0.11
SCN8A-202ENST00000355133 BICDL1Q6ZP65 573 aa15.72■□□□□ 0.11
SCN8A-202ENST00000355133 VSIG10Q8N0Z9 540 aa15.72■□□□□ 0.11
SCN8A-202ENST00000355133 ACBD3Q9H3P7 528 aa15.72■□□□□ 0.11
SCN8A-202ENST00000355133 SPINK5Q9NQ38 1064 aaPredicted RBP15.72■□□□□ 0.11
SCN8A-202ENST00000355133 KIAA1107Q9UPP5 1409 aa15.72■□□□□ 0.11
SCN8A-202ENST00000355133 CCDC85AQ96PX6 553 aaPredicted RBP15.72■□□□□ 0.11
SCN8A-202ENST00000355133 HSP90B2PQ58FF3 399 aa15.72■□□□□ 0.11
SCN8A-202ENST00000355133 MBD3O95983 291 aa15.71■□□□□ 0.11
SCN8A-202ENST00000355133 SKIDA1Q1XH10 827 aa15.71■□□□□ 0.11
SCN8A-202ENST00000355133 ZHX3Q9H4I2 956 aa15.71■□□□□ 0.11
SCN8A-202ENST00000355133 SLC52A1Q9NWF4 448 aa15.71■□□□□ 0.11
SCN8A-202ENST00000355133 WWC2Q6AWC2 1192 aa15.71■□□□□ 0.11
SCN8A-202ENST00000355133 ERBINQ96RT1 1412 aa15.71■□□□□ 0.11
SCN8A-202ENST00000355133 SRGAP3O43295 1099 aa15.71■□□□□ 0.11
SCN8A-202ENST00000355133 ZC3H6P61129 1189 aaKnown RBP15.71■□□□□ 0.11
SCN8A-202ENST00000355133 ATF7IPQ6VMQ6 1270 aa15.71■□□□□ 0.11
SCN8A-202ENST00000355133 TRIM22Q8IYM9 498 aa15.71■□□□□ 0.11
SCN8A-202ENST00000355133 WDR63Q8IWG1 891 aa15.7■□□□□ 0.1
SCN8A-202ENST00000355133 SMARCE1Q969G3 411 aa15.7■□□□□ 0.1
SCN8A-202ENST00000355133 IL1RAPL2Q9NP60 686 aa15.69■□□□□ 0.1
SCN8A-202ENST00000355133 ARAP1Q96P48 1450 aa15.69■□□□□ 0.1
SCN8A-202ENST00000355133 SYCP1Q15431 976 aa15.69■□□□□ 0.1
SCN8A-202ENST00000355133 SPC24Q8NBT2 197 aa15.69■□□□□ 0.1
SCN8A-202ENST00000355133 AKNAQ7Z591 1439 aa15.69■□□□□ 0.1
SCN8A-202ENST00000355133 MVPQ14764 893 aaKnown RBP15.69■□□□□ 0.1
SCN8A-202ENST00000355133 ME1P48163 572 aa15.68■□□□□ 0.1
SCN8A-202ENST00000355133 ANKRD1Q15327 319 aa15.68■□□□□ 0.1
SCN8A-202ENST00000355133 ZSCAN25Q6NSZ9 544 aa15.68■□□□□ 0.1
SCN8A-202ENST00000355133 PAF1Q8N7H5 531 aa15.68■□□□□ 0.1
SCN8A-202ENST00000355133 SOGA3Q5TF21 947 aa15.68■□□□□ 0.1
SCN8A-202ENST00000355133 ZSCAN29Q8IWY8 852 aaPredicted RBP15.68■□□□□ 0.1
SCN8A-202ENST00000355133 JMYQ8N9B5 988 aa15.68■□□□□ 0.1
SCN8A-202ENST00000355133 MIS18AQ9NYP9 233 aa15.68■□□□□ 0.1
SCN8A-202ENST00000355133 RAI14Q9P0K7 980 aa15.68■□□□□ 0.1
SCN8A-202ENST00000355133 CWC27Q6UX04 472 aaKnown RBP15.68■□□□□ 0.1
SCN8A-202ENST00000355133 CHD1LQ86WJ1 897 aa15.67■□□□□ 0.1
SCN8A-202ENST00000355133 SERPINC1P01008 464 aa15.67■□□□□ 0.1
SCN8A-202ENST00000355133 TDO2P48775 406 aa15.67■□□□□ 0.1
SCN8A-202ENST00000355133 CEP126Q9P2H0 1117 aa15.67■□□□□ 0.1
SCN8A-202ENST00000355133 NCAPD3P42695 1498 aa15.66■□□□□ 0.1
SCN8A-202ENST00000355133 PLEKHH2Q8IVE3 1493 aa15.66■□□□□ 0.1
SCN8A-202ENST00000355133 AEBP1Q8IUX7 1158 aa15.66■□□□□ 0.1
SCN8A-202ENST00000355133 PIBF1Q8WXW3 757 aa15.66■□□□□ 0.1
SCN8A-202ENST00000355133 LARP1BQ659C4 914 aaKnown RBP15.66■□□□□ 0.1
SCN8A-202ENST00000355133 RDXP35241 583 aaKnown RBP15.65■□□□□ 0.1
SCN8A-202ENST00000355133 TANGO6Q9C0B7 1094 aa15.65■□□□□ 0.1
SCN8A-202ENST00000355133 PIP4K2AP48426 406 aaPredicted RBP15.65■□□□□ 0.1
SCN8A-202ENST00000355133 NUDT16Q96DE0 195 aaKnown RBP15.65■□□□□ 0.1
SCN8A-202ENST00000355133 JAKMIP1Q96N16 626 aaKnown RBP15.65■□□□□ 0.1
SCN8A-202ENST00000355133 PDCL3Q9H2J4 239 aa15.65■□□□□ 0.1
SCN8A-202ENST00000355133 PDRG1Q9NUG6 133 aa15.65■□□□□ 0.1
SCN8A-202ENST00000355133 BLOC1S2Q6QNY1 142 aa15.65■□□□□ 0.1
SCN8A-202ENST00000355133 TNMDQ9H2S6 317 aa15.65■□□□□ 0.1
SCN8A-202ENST00000355133 NESP48681 1621 aa15.65■□□□□ 0.1
SCN8A-202ENST00000355133 CT47B1P0C2W7 299 aaPredicted RBP15.64■□□□□ 0.09
SCN8A-202ENST00000355133 LRP2BPQ9P2M1 347 aa15.64■□□□□ 0.09
SCN8A-202ENST00000355133 K7ELQ4 463 aaPredicted RBP15.64■□□□□ 0.09
SCN8A-202ENST00000355133 NUTM1Q86Y26 1132 aa15.64■□□□□ 0.09
SCN8A-202ENST00000355133 UBAC1Q9BSL1 405 aa15.64■□□□□ 0.09
SCN8A-202ENST00000355133 EHBP1L1Q8N3D4 1523 aa15.64■□□□□ 0.09
SCN8A-202ENST00000355133 GNAT3A8MTJ3 354 aa15.64■□□□□ 0.09
SCN8A-202ENST00000355133 IDH1O75874 414 aaKnown RBP15.64■□□□□ 0.09
SCN8A-202ENST00000355133 MPNDQ8N594 471 aa15.64■□□□□ 0.09
SCN8A-202ENST00000355133 ZNHIT6Q9NWK9 470 aaKnown RBP15.63■□□□□ 0.09
SCN8A-202ENST00000355133 MYO6Q9UM54 1294 aa15.63■□□□□ 0.09
SCN8A-202ENST00000355133 ATAD2Q6PL18 1390 aa15.63■□□□□ 0.09
SCN8A-202ENST00000355133 FCHSD2O94868 740 aa15.63■□□□□ 0.09
SCN8A-202ENST00000355133 SSBP05455 408 aaKnown RBP eCLIP15.63■□□□□ 0.09
SCN8A-202ENST00000355133 IGHMBP2P38935 993 aaKnown RBP15.63■□□□□ 0.09
SCN8A-202ENST00000355133 WDR33Q9C0J8 1336 aaKnown RBP15.63■□□□□ 0.09
SCN8A-202ENST00000355133 ERICH3Q5RHP9 1530 aa15.63■□□□□ 0.09
SCN8A-202ENST00000355133 RPGRIP1LQ68CZ1 1315 aa15.63■□□□□ 0.09
SCN8A-202ENST00000355133 THUMPD2Q9BTF0 503 aaKnown RBP15.63■□□□□ 0.09
SCN8A-202ENST00000355133 NFE2L2Q16236 605 aa15.62■□□□□ 0.09
SCN8A-202ENST00000355133 MCM10Q7L590 875 aa15.62■□□□□ 0.09
SCN8A-202ENST00000355133 NOL7Q9UMY1 257 aaKnown RBP15.62■□□□□ 0.09
SCN8A-202ENST00000355133 CCDC192P0DO97 292 aa15.62■□□□□ 0.09
SCN8A-202ENST00000355133 STIM1Q13586 685 aa15.62■□□□□ 0.09
SCN8A-202ENST00000355133 ERCC4Q92889 916 aaPredicted RBP15.62■□□□□ 0.09
SCN8A-202ENST00000355133 TROQ12816 1431 aaPredicted RBP15.62■□□□□ 0.09
SCN8A-202ENST00000355133 PTCD1O75127 700 aaKnown RBP15.62■□□□□ 0.09
SCN8A-202ENST00000355133 KRT85P78386 507 aa15.62■□□□□ 0.09
SCN8A-202ENST00000355133 MRC2Q9UBG0 1479 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms