RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 RAI14Q9P0K7 980 aa9.44□□□□□ -0.9
SCN8A-201ENST00000354534 SPECC1LQ69YQ0 1117 aa9.44□□□□□ -0.9
SCN8A-201ENST00000354534 CETN2P41208 172 aa9.44□□□□□ -0.9
SCN8A-201ENST00000354534 HOOK3Q86VS8 718 aa9.44□□□□□ -0.9
SCN8A-201ENST00000354534 G3BP1Q13283 466 aaKnown RBP eCLIP9.43□□□□□ -0.9
SCN8A-201ENST00000354534 C1orf141Q5JVX7 400 aa9.43□□□□□ -0.9
SCN8A-201ENST00000354534 FMN1Q68DA7 1419 aa9.43□□□□□ -0.9
SCN8A-201ENST00000354534 MBD3O95983 291 aa9.43□□□□□ -0.9
SCN8A-201ENST00000354534 CTNNBL1Q8WYA6 563 aaPredicted RBP9.43□□□□□ -0.9
SCN8A-201ENST00000354534 ZBED9Q6R2W3 1325 aa9.43□□□□□ -0.9
SCN8A-201ENST00000354534 MIPOL1Q8TD10 442 aa9.43□□□□□ -0.9
SCN8A-201ENST00000354534 WHAMMQ8TF30 809 aa9.43□□□□□ -0.9
SCN8A-201ENST00000354534 FIBPO43427 364 aa9.43□□□□□ -0.9
SCN8A-201ENST00000354534 CEP120Q8N960 986 aa9.43□□□□□ -0.9
SCN8A-201ENST00000354534 BAZ1AQ9NRL2 1556 aaPredicted RBP9.43□□□□□ -0.9
SCN8A-201ENST00000354534 AAMPQ13685 434 aa9.43□□□□□ -0.9
SCN8A-201ENST00000354534 PSMC4P43686 418 aa9.43□□□□□ -0.9
SCN8A-201ENST00000354534 GTPBP4Q9BZE4 634 aaKnown RBP9.43□□□□□ -0.9
SCN8A-201ENST00000354534 COG6Q9Y2V7 657 aa9.43□□□□□ -0.9
SCN8A-201ENST00000354534 SETSIPP0DME0 302 aa9.43□□□□□ -0.9
SCN8A-201ENST00000354534 MXRA7P84157 204 aa9.43□□□□□ -0.9
SCN8A-201ENST00000354534 PDE1CQ14123 709 aaPredicted RBP9.43□□□□□ -0.9
SCN8A-201ENST00000354534 RAB3IL1Q8TBN0 382 aa9.43□□□□□ -0.9
SCN8A-201ENST00000354534 TRIM21P19474 475 aaKnown RBP9.42□□□□□ -0.9
SCN8A-201ENST00000354534 ANKRD30AQ9BXX3 1397 aa9.42□□□□□ -0.9
SCN8A-201ENST00000354534 ATP2C2O75185 946 aa9.42□□□□□ -0.9
SCN8A-201ENST00000354534 CTR9Q6PD62 1173 aa9.42□□□□□ -0.9
SCN8A-201ENST00000354534 UACAQ9BZF9 1416 aa9.42□□□□□ -0.9
SCN8A-201ENST00000354534 MYBBP1AQ9BQG0 1328 aaKnown RBP9.42□□□□□ -0.9
SCN8A-201ENST00000354534 ARHGAP29Q52LW3 1261 aa9.42□□□□□ -0.9
SCN8A-201ENST00000354534 TPD52P55327 224 aaPredicted RBP9.42□□□□□ -0.9
SCN8A-201ENST00000354534 SART3Q15020 963 aaKnown RBP9.42□□□□□ -0.9
SCN8A-201ENST00000354534 ZKSCAN2Q63HK3 967 aa9.42□□□□□ -0.9
SCN8A-201ENST00000354534 RPUSD2Q8IZ73 545 aaKnown RBP9.42□□□□□ -0.9
SCN8A-201ENST00000354534 ERCC6Q03468 1493 aa9.42□□□□□ -0.9
SCN8A-201ENST00000354534 NAA25Q14CX7 972 aa9.42□□□□□ -0.9
SCN8A-201ENST00000354534 STK38Q15208 465 aa9.42□□□□□ -0.9
SCN8A-201ENST00000354534 NINLQ9Y2I6 1382 aa9.42□□□□□ -0.9
SCN8A-201ENST00000354534 GBP7Q8N8V2 638 aaPredicted RBP9.42□□□□□ -0.9
SCN8A-201ENST00000354534 SWAP70Q9UH65 585 aa9.42□□□□□ -0.9
SCN8A-201ENST00000354534 LMAN1P49257 510 aa9.41□□□□□ -0.9
SCN8A-201ENST00000354534 ERC2O15083 957 aa9.41□□□□□ -0.9
SCN8A-201ENST00000354534 LARP1Q6PKG0 1096 aaKnown RBP9.41□□□□□ -0.9
SCN8A-201ENST00000354534 EXOC6Q8TAG9 804 aa9.41□□□□□ -0.9
SCN8A-201ENST00000354534 HSPA4P34932 840 aa9.41□□□□□ -0.9
SCN8A-201ENST00000354534 PLCD3Q8N3E9 789 aa9.41□□□□□ -0.9
SCN8A-201ENST00000354534 MRVI1Q9Y6F6 885 aa9.41□□□□□ -0.9
SCN8A-201ENST00000354534 SPDYE4A6NLX3 237 aa9.41□□□□□ -0.9
SCN8A-201ENST00000354534 POTEJP0CG39 1038 aa9.41□□□□□ -0.9
SCN8A-201ENST00000354534 RFC1P35251 1148 aaPredicted RBP9.41□□□□□ -0.9
SCN8A-201ENST00000354534 NEUROD6Q96NK8 337 aa9.41□□□□□ -0.9
SCN8A-201ENST00000354534 EIF5P55010 431 aaKnown RBP9.41□□□□□ -0.9
SCN8A-201ENST00000354534 TCHPQ9BT92 498 aa9.41□□□□□ -0.9
SCN8A-201ENST00000354534 ATP2B2Q01814 1243 aa9.41□□□□□ -0.9
SCN8A-201ENST00000354534 IMMTQ16891 758 aaKnown RBP9.41□□□□□ -0.9
SCN8A-201ENST00000354534 CWC25Q9NXE8 425 aaPredicted RBP9.41□□□□□ -0.9
SCN8A-201ENST00000354534 ZFYP08048 801 aaPredicted RBP9.4□□□□□ -0.9
SCN8A-201ENST00000354534 ME1P48163 572 aa9.4□□□□□ -0.9
SCN8A-201ENST00000354534 DNA2P51530 1060 aa9.4□□□□□ -0.9
SCN8A-201ENST00000354534 CCDC174Q6PII3 467 aa9.4□□□□□ -0.9
SCN8A-201ENST00000354534 FILIP1Q7Z7B0 1213 aa9.4□□□□□ -0.9
SCN8A-201ENST00000354534 TMX1Q9H3N1 280 aa9.4□□□□□ -0.9
SCN8A-201ENST00000354534 PKD2Q13563 968 aa9.4□□□□□ -0.9
SCN8A-201ENST00000354534 PPP1R14CQ8TAE6 165 aa9.4□□□□□ -0.9
SCN8A-201ENST00000354534 PAIP2Q9BPZ3 127 aaKnown RBP9.4□□□□□ -0.9
SCN8A-201ENST00000354534 PPP1R1BQ9UD71 204 aaPredicted RBP9.4□□□□□ -0.9
SCN8A-201ENST00000354534 ERCC3P19447 782 aa9.4□□□□□ -0.9
SCN8A-201ENST00000354534 DDX19BQ9UMR2 479 aa9.4□□□□□ -0.9
SCN8A-201ENST00000354534 SARNPP82979 210 aaKnown RBP9.4□□□□□ -0.9
SCN8A-201ENST00000354534 PPP1R9BQ96SB3 815 aa9.4□□□□□ -0.9
SCN8A-201ENST00000354534 GRPEL1Q9HAV7 217 aa9.4□□□□□ -0.9
SCN8A-201ENST00000354534 DRC1Q96MC2 740 aa9.4□□□□□ -0.9
SCN8A-201ENST00000354534 SMARCC1Q92922 1105 aaPredicted RBP9.4□□□□□ -0.91
SCN8A-201ENST00000354534 HLTFQ14527 1009 aaKnown RBP eCLIP9.4□□□□□ -0.91
SCN8A-201ENST00000354534 ZNF428Q96B54 188 aa9.39□□□□□ -0.91
SCN8A-201ENST00000354534 MACROD2A1Z1Q3 448 aa9.39□□□□□ -0.91
SCN8A-201ENST00000354534 RRP1P56182 461 aaKnown RBP9.39□□□□□ -0.91
SCN8A-201ENST00000354534 PTPN14Q15678 1187 aa9.39□□□□□ -0.91
SCN8A-201ENST00000354534 CEP57Q86XR8 500 aa9.39□□□□□ -0.91
SCN8A-201ENST00000354534 PDCP20941 246 aa9.39□□□□□ -0.91
SCN8A-201ENST00000354534 DZIP1LQ8IYY4 767 aaKnown RBP9.39□□□□□ -0.91
SCN8A-201ENST00000354534 LNPKQ9C0E8 428 aa9.39□□□□□ -0.91
SCN8A-201ENST00000354534 KIF5CO60282 957 aa9.39□□□□□ -0.91
SCN8A-201ENST00000354534 SPA17Q15506 151 aa9.39□□□□□ -0.91
SCN8A-201ENST00000354534 SEPT8Q92599 483 aa9.39□□□□□ -0.91
SCN8A-201ENST00000354534 PABPN1LA6NDY0 278 aaKnown RBP9.39□□□□□ -0.91
SCN8A-201ENST00000354534 SATB1Q01826 763 aa9.39□□□□□ -0.91
SCN8A-201ENST00000354534 JMYQ8N9B5 988 aa9.39□□□□□ -0.91
SCN8A-201ENST00000354534 TSNARE1Q96NA8 513 aa9.39□□□□□ -0.91
SCN8A-201ENST00000354534 FSD2A1L4K1 749 aa9.39□□□□□ -0.91
SCN8A-201ENST00000354534 ARL1P40616 181 aaPredicted RBP9.39□□□□□ -0.91
SCN8A-201ENST00000354534 NUP133Q8WUM0 1156 aa9.39□□□□□ -0.91
SCN8A-201ENST00000354534 ERC1Q8IUD2 1116 aa9.39□□□□□ -0.91
SCN8A-201ENST00000354534 TAOK3Q9H2K8 898 aa9.39□□□□□ -0.91
SCN8A-201ENST00000354534 A0A1W2PRG0 241 aa9.39□□□□□ -0.91
SCN8A-201ENST00000354534 MRPS9P82933 396 aaKnown RBP9.39□□□□□ -0.91
SCN8A-201ENST00000354534 URI1O94763 535 aaPredicted RBP9.38□□□□□ -0.91
SCN8A-201ENST00000354534 PPP4R3BQ5MIZ7 849 aa9.38□□□□□ -0.91
SCN8A-201ENST00000354534 CNTROBQ8N137 903 aa9.38□□□□□ -0.91
SCN8A-201ENST00000354534 ZMAT2Q96NC0 199 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms