RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 TOM1O60784 492 aa13.46□□□□□ -0.26
SLC6A20-201ENST00000353278 TSR2Q969E8 191 aaKnown RBP13.46□□□□□ -0.26
SLC6A20-201ENST00000353278 CDK5RAP3Q96JB5 506 aa13.46□□□□□ -0.26
SLC6A20-201ENST00000353278 EXOC5O00471 708 aa13.46□□□□□ -0.26
SLC6A20-201ENST00000353278 EPS15P42566 896 aa13.45□□□□□ -0.26
SLC6A20-201ENST00000353278 ODF2Q5BJF6 829 aa13.45□□□□□ -0.26
SLC6A20-201ENST00000353278 GCC1Q96CN9 775 aa13.45□□□□□ -0.26
SLC6A20-201ENST00000353278 SASS6Q6UVJ0 657 aa13.45□□□□□ -0.26
SLC6A20-201ENST00000353278 WDR63Q8IWG1 891 aa13.45□□□□□ -0.26
SLC6A20-201ENST00000353278 GRIN2AQ12879 1464 aa13.45□□□□□ -0.26
SLC6A20-201ENST00000353278 TXLNAP40222 546 aa13.45□□□□□ -0.26
SLC6A20-201ENST00000353278 CCAR2Q8N163 923 aaKnown RBP13.45□□□□□ -0.26
SLC6A20-201ENST00000353278 OFD1O75665 1012 aa13.44□□□□□ -0.26
SLC6A20-201ENST00000353278 CHMP5Q9NZZ3 219 aa13.44□□□□□ -0.26
SLC6A20-201ENST00000353278 ATP2B1P20020 1258 aa13.44□□□□□ -0.26
SLC6A20-201ENST00000353278 C22orf23Q9BZE7 217 aa13.44□□□□□ -0.26
SLC6A20-201ENST00000353278 CDK13Q14004 1512 aaKnown RBP13.44□□□□□ -0.26
SLC6A20-201ENST00000353278 FBXO31Q5XUX0 539 aaPredicted RBP13.44□□□□□ -0.26
SLC6A20-201ENST00000353278 RAI14Q9P0K7 980 aa13.44□□□□□ -0.26
SLC6A20-201ENST00000353278 PDCP20941 246 aa13.43□□□□□ -0.26
SLC6A20-201ENST00000353278 LRRCC1Q9C099 1032 aa13.43□□□□□ -0.26
SLC6A20-201ENST00000353278 NOB1Q9ULX3 412 aaKnown RBP13.43□□□□□ -0.26
SLC6A20-201ENST00000353278 UBAP1LF5GYI3 381 aa13.43□□□□□ -0.26
SLC6A20-201ENST00000353278 IDI1Q13907 227 aa13.43□□□□□ -0.26
SLC6A20-201ENST00000353278 NFE2L2Q16236 605 aa13.43□□□□□ -0.26
SLC6A20-201ENST00000353278 TRIM22Q8IYM9 498 aa13.43□□□□□ -0.26
SLC6A20-201ENST00000353278 NBPF8Q3BBV2 869 aa13.42□□□□□ -0.26
SLC6A20-201ENST00000353278 SOGA3Q5TF21 947 aa13.42□□□□□ -0.26
SLC6A20-201ENST00000353278 FKBP4Q02790 459 aaKnown RBP eCLIP13.42□□□□□ -0.26
SLC6A20-201ENST00000353278 PDE3AQ14432 1141 aa13.42□□□□□ -0.26
SLC6A20-201ENST00000353278 KRT28Q7Z3Y7 464 aa13.42□□□□□ -0.26
SLC6A20-201ENST00000353278 ZNF428Q96B54 188 aa13.42□□□□□ -0.26
SLC6A20-201ENST00000353278 SDF4Q9BRK5 362 aa13.42□□□□□ -0.26
SLC6A20-201ENST00000353278 LRP2BPQ9P2M1 347 aa13.42□□□□□ -0.26
SLC6A20-201ENST00000353278 KRT18P05783 430 aaKnown RBP13.42□□□□□ -0.26
SLC6A20-201ENST00000353278 SUPT6HQ7KZ85 1726 aaKnown RBP13.42□□□□□ -0.26
SLC6A20-201ENST00000353278 SRGAP3O43295 1099 aa13.42□□□□□ -0.26
SLC6A20-201ENST00000353278 MPRIPQ6WCQ1 1025 aa13.42□□□□□ -0.26
SLC6A20-201ENST00000353278 PLB1Q6P1J6 1458 aa13.42□□□□□ -0.26
SLC6A20-201ENST00000353278 HSP90AB3PQ58FF7 597 aa13.41□□□□□ -0.26
SLC6A20-201ENST00000353278 OLFM4Q6UX06 510 aa13.41□□□□□ -0.26
SLC6A20-201ENST00000353278 KDM4AO75164 1064 aa13.41□□□□□ -0.26
SLC6A20-201ENST00000353278 C1orf115Q9H7X2 142 aa13.41□□□□□ -0.26
SLC6A20-201ENST00000353278 WASLO00401 505 aaPredicted RBP13.4□□□□□ -0.26
SLC6A20-201ENST00000353278 NSD3Q9BZ95 1437 aa13.4□□□□□ -0.26
SLC6A20-201ENST00000353278 TDO2P48775 406 aa13.4□□□□□ -0.26
SLC6A20-201ENST00000353278 MCM2P49736 904 aa13.4□□□□□ -0.26
SLC6A20-201ENST00000353278 MSH6P52701 1360 aa13.4□□□□□ -0.26
SLC6A20-201ENST00000353278 LARP1Q6PKG0 1096 aaKnown RBP13.4□□□□□ -0.26
SLC6A20-201ENST00000353278 AACSQ86V21 672 aa13.4□□□□□ -0.26
SLC6A20-201ENST00000353278 CTNNA3Q9UI47 895 aa13.39□□□□□ -0.27
SLC6A20-201ENST00000353278 IFIT1P09914 478 aaKnown RBP13.39□□□□□ -0.27
SLC6A20-201ENST00000353278 METTL24Q5JXM2 366 aa13.39□□□□□ -0.27
SLC6A20-201ENST00000353278 PAF1Q8N7H5 531 aa13.39□□□□□ -0.27
SLC6A20-201ENST00000353278 CDCA7LQ96GN5 454 aa13.39□□□□□ -0.27
SLC6A20-201ENST00000353278 CCDC85AQ96PX6 553 aaPredicted RBP13.39□□□□□ -0.27
SLC6A20-201ENST00000353278 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.39□□□□□ -0.27
SLC6A20-201ENST00000353278 CCDC69A6NI79 296 aa13.39□□□□□ -0.27
SLC6A20-201ENST00000353278 ATF7IPQ6VMQ6 1270 aa13.39□□□□□ -0.27
SLC6A20-201ENST00000353278 CAVIN4Q5BKX8 364 aa13.39□□□□□ -0.27
SLC6A20-201ENST00000353278 ZFYVE27Q5T4F4 411 aa13.39□□□□□ -0.27
SLC6A20-201ENST00000353278 BCL11BQ9C0K0 894 aaPredicted RBP13.39□□□□□ -0.27
SLC6A20-201ENST00000353278 NAT10Q9H0A0 1025 aaKnown RBP13.38□□□□□ -0.27
SLC6A20-201ENST00000353278 MPHOSPH10O00566 681 aaKnown RBP13.38□□□□□ -0.27
SLC6A20-201ENST00000353278 NAP1L1P55209 391 aaKnown RBP13.38□□□□□ -0.27
SLC6A20-201ENST00000353278 UBAC1Q9BSL1 405 aa13.38□□□□□ -0.27
SLC6A20-201ENST00000353278 ABCF2Q9UG63 623 aa13.38□□□□□ -0.27
SLC6A20-201ENST00000353278 NEK4P51957 841 aa13.38□□□□□ -0.27
SLC6A20-201ENST00000353278 ZNF287Q9HBT7 754 aa13.38□□□□□ -0.27
SLC6A20-201ENST00000353278 TIAM1Q13009 1591 aa13.38□□□□□ -0.27
SLC6A20-201ENST00000353278 RPGRQ92834 1020 aaKnown RBP13.38□□□□□ -0.27
SLC6A20-201ENST00000353278 AK7Q96M32 723 aa13.38□□□□□ -0.27
SLC6A20-201ENST00000353278 FANCAO15360 1455 aa13.38□□□□□ -0.27
SLC6A20-201ENST00000353278 STK11IPQ8N1F8 1099 aa13.37□□□□□ -0.27
SLC6A20-201ENST00000353278 JMYQ8N9B5 988 aa13.37□□□□□ -0.27
SLC6A20-201ENST00000353278 AKAP2Q9Y2D5 859 aa13.37□□□□□ -0.27
SLC6A20-201ENST00000353278 KIF14Q15058 1648 aa13.37□□□□□ -0.27
SLC6A20-201ENST00000353278 TNRQ92752 1358 aa13.37□□□□□ -0.27
SLC6A20-201ENST00000353278 TAF7Q15545 349 aaPredicted RBP13.37□□□□□ -0.27
SLC6A20-201ENST00000353278 IDH1O75874 414 aaKnown RBP13.37□□□□□ -0.27
SLC6A20-201ENST00000353278 ANKRD1Q15327 319 aa13.37□□□□□ -0.27
SLC6A20-201ENST00000353278 NME9Q86XW9 330 aa13.37□□□□□ -0.27
SLC6A20-201ENST00000353278 TEX13AQ9BXU3 409 aaPredicted RBP13.37□□□□□ -0.27
SLC6A20-201ENST00000353278 ANKIB1Q9P2G1 1089 aa13.37□□□□□ -0.27
SLC6A20-201ENST00000353278 CYP46A1Q9Y6A2 500 aa13.37□□□□□ -0.27
SLC6A20-201ENST00000353278 HOMER1Q86YM7 354 aa13.36□□□□□ -0.27
SLC6A20-201ENST00000353278 NUP133Q8WUM0 1156 aa13.36□□□□□ -0.27
SLC6A20-201ENST00000353278 TEX14Q8IWB6 1497 aa13.36□□□□□ -0.27
SLC6A20-201ENST00000353278 ZNF396Q96N95 335 aaPredicted RBP13.36□□□□□ -0.27
SLC6A20-201ENST00000353278 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.36□□□□□ -0.27
SLC6A20-201ENST00000353278 DUSP27Q5VZP5 1158 aa13.36□□□□□ -0.27
SLC6A20-201ENST00000353278 TMPOP42166 694 aaKnown RBP13.36□□□□□ -0.27
SLC6A20-201ENST00000353278 STK38Q15208 465 aa13.36□□□□□ -0.27
SLC6A20-201ENST00000353278 USHBP1Q8N6Y0 703 aa13.36□□□□□ -0.27
SLC6A20-201ENST00000353278 KINO60870 393 aaKnown RBP13.35□□□□□ -0.27
SLC6A20-201ENST00000353278 CRACR2BQ8N4Y2 399 aaPredicted RBP13.35□□□□□ -0.27
SLC6A20-201ENST00000353278 FMNL2Q96PY5 1086 aa13.35□□□□□ -0.27
SLC6A20-201ENST00000353278 PAXIP1Q6ZW49 1069 aaPredicted RBP13.35□□□□□ -0.27
SLC6A20-201ENST00000353278 AIDAQ96BJ3 306 aa13.35□□□□□ -0.27
SLC6A20-201ENST00000353278 TRMT112Q9UI30 125 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms