RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 TNNT3P45378 269 aaPredicted RBP14.97□□□□□ -0.01
SMAD9-201ENST00000350148 HTATSF1O43719 755 aaKnown RBP14.96□□□□□ -0.01
SMAD9-201ENST00000350148 AEBP2Q6ZN18 517 aaPredicted RBP14.96□□□□□ -0.01
SMAD9-201ENST00000350148 HDGFL1Q5TGJ6 251 aa14.96□□□□□ -0.01
SMAD9-201ENST00000350148 DUSP27Q5VZP5 1158 aa14.96□□□□□ -0.01
SMAD9-201ENST00000350148 ST18O60284 1047 aa14.96□□□□□ -0.02
SMAD9-201ENST00000350148 RIC3Q7Z5B4 369 aa14.96□□□□□ -0.02
SMAD9-201ENST00000350148 GBP4Q96PP9 640 aa14.96□□□□□ -0.02
SMAD9-201ENST00000350148 TMX4Q9H1E5 349 aaPredicted RBP14.96□□□□□ -0.02
SMAD9-201ENST00000350148 BCAR3O75815 825 aa14.95□□□□□ -0.02
SMAD9-201ENST00000350148 CARD14Q9BXL6 1004 aa14.95□□□□□ -0.02
SMAD9-201ENST00000350148 G3BP1Q13283 466 aaKnown RBP eCLIP14.95□□□□□ -0.02
SMAD9-201ENST00000350148 RSPH6AQ9H0K4 717 aa14.95□□□□□ -0.02
SMAD9-201ENST00000350148 TOM1L2Q6ZVM7 507 aa14.95□□□□□ -0.02
SMAD9-201ENST00000350148 RNF17Q9BXT8 1623 aaKnown RBP14.94□□□□□ -0.02
SMAD9-201ENST00000350148 RARSP54136 660 aaKnown RBP14.94□□□□□ -0.02
SMAD9-201ENST00000350148 NPHP3Q7Z494 1330 aa14.94□□□□□ -0.02
SMAD9-201ENST00000350148 ERC2O15083 957 aa14.94□□□□□ -0.02
SMAD9-201ENST00000350148 GNAI2P04899 355 aa14.94□□□□□ -0.02
SMAD9-201ENST00000350148 C19orf44Q9H6X5 657 aa14.94□□□□□ -0.02
SMAD9-201ENST00000350148 MAP3K4Q9Y6R4 1608 aa14.94□□□□□ -0.02
SMAD9-201ENST00000350148 SLC4A2P04920 1241 aa14.93□□□□□ -0.02
SMAD9-201ENST00000350148 TAF7Q15545 349 aaPredicted RBP14.93□□□□□ -0.02
SMAD9-201ENST00000350148 BRPF3Q9ULD4 1205 aa14.93□□□□□ -0.02
SMAD9-201ENST00000350148 FLT4P35916 1363 aa14.93□□□□□ -0.02
SMAD9-201ENST00000350148 KCNA6P17658 529 aa14.93□□□□□ -0.02
SMAD9-201ENST00000350148 CABP4P57796 275 aa14.93□□□□□ -0.02
SMAD9-201ENST00000350148 CLTCL1P53675 1640 aa14.93□□□□□ -0.02
SMAD9-201ENST00000350148 ERC1Q8IUD2 1116 aa14.93□□□□□ -0.02
SMAD9-201ENST00000350148 TSPOAP1O95153 1857 aa14.93□□□□□ -0.02
SMAD9-201ENST00000350148 MEX3CQ5U5Q3 659 aaKnown RBP14.92□□□□□ -0.02
SMAD9-201ENST00000350148 IFIT2P09913 472 aaKnown RBP14.92□□□□□ -0.02
SMAD9-201ENST00000350148 INTS3Q68E01 1043 aaKnown RBP14.92□□□□□ -0.02
SMAD9-201ENST00000350148 RPAP2Q8IXW5 612 aaPredicted RBP14.92□□□□□ -0.02
SMAD9-201ENST00000350148 PLEKHG3A1L390 1219 aa14.91□□□□□ -0.02
SMAD9-201ENST00000350148 FAM135BQ49AJ0 1406 aa14.91□□□□□ -0.02
SMAD9-201ENST00000350148 RIMBP3CA6NJZ7 1639 aa14.91□□□□□ -0.02
SMAD9-201ENST00000350148 RIMBP3BA6NNM3 1639 aa14.91□□□□□ -0.02
SMAD9-201ENST00000350148 RIMBP3Q9UFD9 1639 aa14.91□□□□□ -0.02
SMAD9-201ENST00000350148 FOXO3O43524 673 aa14.91□□□□□ -0.02
SMAD9-201ENST00000350148 NECTIN2Q92692 538 aa14.91□□□□□ -0.02
SMAD9-201ENST00000350148 GTF2E1P29083 439 aaPredicted RBP14.91□□□□□ -0.02
SMAD9-201ENST00000350148 POLKQ9UBT6 870 aa14.91□□□□□ -0.02
SMAD9-201ENST00000350148 TRPM1Q7Z4N2 1603 aa14.91□□□□□ -0.02
SMAD9-201ENST00000350148 PIK3R4Q99570 1358 aa14.91□□□□□ -0.02
SMAD9-201ENST00000350148 AGLP35573 1532 aa14.91□□□□□ -0.02
SMAD9-201ENST00000350148 BTBD11A6QL63 1104 aa14.91□□□□□ -0.02
SMAD9-201ENST00000350148 ZRSR1Q15695 479 aaKnown RBP14.91□□□□□ -0.02
SMAD9-201ENST00000350148 SRCIN1Q9C0H9 1055 aa14.9□□□□□ -0.02
SMAD9-201ENST00000350148 PTPRCP08575 1304 aa14.9□□□□□ -0.02
SMAD9-201ENST00000350148 LAMC1P11047 1609 aa14.9□□□□□ -0.02
SMAD9-201ENST00000350148 SOS1Q07889 1333 aaPredicted RBP14.89□□□□□ -0.03
SMAD9-201ENST00000350148 ZC3H13Q5T200 1668 aaKnown RBP14.89□□□□□ -0.03
SMAD9-201ENST00000350148 UGGT1Q9NYU2 1555 aa14.89□□□□□ -0.03
SMAD9-201ENST00000350148 CDC45O75419 566 aa14.89□□□□□ -0.03
SMAD9-201ENST00000350148 ARHGAP45Q92619 1136 aa14.89□□□□□ -0.03
SMAD9-201ENST00000350148 ATP7BP35670 1465 aa14.89□□□□□ -0.03
SMAD9-201ENST00000350148 DIAPH3Q9NSV4 1193 aa14.89□□□□□ -0.03
SMAD9-201ENST00000350148 ADGRB3O60242 1522 aa14.88□□□□□ -0.03
SMAD9-201ENST00000350148 PTMAP06454 111 aaKnown RBP14.88□□□□□ -0.03
SMAD9-201ENST00000350148 SPRYD3Q8NCJ5 442 aa14.88□□□□□ -0.03
SMAD9-201ENST00000350148 KIF6Q6ZMV9 814 aa14.88□□□□□ -0.03
SMAD9-201ENST00000350148 KIF3AQ9Y496 699 aa14.87□□□□□ -0.03
SMAD9-201ENST00000350148 DIP2CQ9Y2E4 1556 aa14.87□□□□□ -0.03
SMAD9-201ENST00000350148 SETBP1Q9Y6X0 1596 aa14.87□□□□□ -0.03
SMAD9-201ENST00000350148 ZC3H6P61129 1189 aaKnown RBP14.87□□□□□ -0.03
SMAD9-201ENST00000350148 PDZRN3Q9UPQ7 1066 aa14.87□□□□□ -0.03
SMAD9-201ENST00000350148 BLMP54132 1417 aaPredicted RBP14.87□□□□□ -0.03
SMAD9-201ENST00000350148 RILPL2Q969X0 211 aa14.87□□□□□ -0.03
SMAD9-201ENST00000350148 STRN4Q9NRL3 753 aa14.87□□□□□ -0.03
SMAD9-201ENST00000350148 E9PCH4 1651 aa14.87□□□□□ -0.03
SMAD9-201ENST00000350148 ZMYM4Q5VZL5 1548 aa14.86□□□□□ -0.03
SMAD9-201ENST00000350148 LNPKQ9C0E8 428 aa14.86□□□□□ -0.03
SMAD9-201ENST00000350148 XPCQ01831 940 aaPredicted RBP14.86□□□□□ -0.03
SMAD9-201ENST00000350148 CSPP1Q1MSJ5 1256 aa14.86□□□□□ -0.03
SMAD9-201ENST00000350148 SSH1Q8WYL5 1049 aa14.86□□□□□ -0.03
SMAD9-201ENST00000350148 USP35Q9P2H5 1018 aa14.86□□□□□ -0.03
SMAD9-201ENST00000350148 SYTL4Q96C24 671 aaPredicted RBP14.86□□□□□ -0.03
SMAD9-201ENST00000350148 L1TD1Q5T7N2 865 aaKnown RBP14.85□□□□□ -0.03
SMAD9-201ENST00000350148 SBNO1A3KN83 1393 aa14.85□□□□□ -0.03
SMAD9-201ENST00000350148 CLASRPQ8N2M8 674 aaKnown RBP14.85□□□□□ -0.03
SMAD9-201ENST00000350148 CAMSAP1Q5T5Y3 1602 aa14.85□□□□□ -0.03
SMAD9-201ENST00000350148 GOLGA6L4A6NEF3 574 aa14.85□□□□□ -0.03
SMAD9-201ENST00000350148 HIP1O00291 1037 aa14.85□□□□□ -0.03
SMAD9-201ENST00000350148 CFAP65Q6ZU64 1925 aaKnown RBP14.84□□□□□ -0.03
SMAD9-201ENST00000350148 BABAM1Q9NWV8 329 aa14.84□□□□□ -0.03
SMAD9-201ENST00000350148 NAP1L2Q9ULW6 460 aaPredicted RBP14.84□□□□□ -0.03
SMAD9-201ENST00000350148 MADDQ8WXG6 1647 aa14.84□□□□□ -0.03
SMAD9-201ENST00000350148 EIF4A2Q14240 407 aaKnown RBP14.84□□□□□ -0.03
SMAD9-201ENST00000350148 MCM10Q7L590 875 aa14.83□□□□□ -0.03
SMAD9-201ENST00000350148 AIMP1Q12904 312 aaKnown RBP14.83□□□□□ -0.04
SMAD9-201ENST00000350148 RNF20Q5VTR2 975 aa14.83□□□□□ -0.04
SMAD9-201ENST00000350148 ANKRD24Q8TF21 1146 aa14.83□□□□□ -0.04
SMAD9-201ENST00000350148 ZKSCAN1P17029 563 aaPredicted RBP14.83□□□□□ -0.04
SMAD9-201ENST00000350148 IFNL2Q8IZJ0 200 aa14.83□□□□□ -0.04
SMAD9-201ENST00000350148 A2ML1A8K2U0 1454 aa14.82□□□□□ -0.04
SMAD9-201ENST00000350148 GSE1Q14687 1217 aa14.82□□□□□ -0.04
SMAD9-201ENST00000350148 NEURL4Q96JN8 1562 aa14.82□□□□□ -0.04
SMAD9-201ENST00000350148 NCKAP5LQ9HCH0 1330 aa14.82□□□□□ -0.04
SMAD9-201ENST00000350148 TMEM57Q8N5G2 664 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms