RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 INCENPQ9NQS7 918 aa13.19□□□□□ -0.3
SMARCE1-202ENST00000348513 TTC31Q49AM3 519 aaPredicted RBP13.19□□□□□ -0.3
SMARCE1-202ENST00000348513 HSP90AB4PQ58FF6 505 aa13.19□□□□□ -0.3
SMARCE1-202ENST00000348513 DNAAF4Q8WXU2 420 aa13.19□□□□□ -0.3
SMARCE1-202ENST00000348513 XPCQ01831 940 aaPredicted RBP13.19□□□□□ -0.3
SMARCE1-202ENST00000348513 DDX54Q8TDD1 881 aaKnown RBP13.19□□□□□ -0.3
SMARCE1-202ENST00000348513 CWC22Q9HCG8 908 aaKnown RBP13.19□□□□□ -0.3
SMARCE1-202ENST00000348513 NCAPD3P42695 1498 aa13.19□□□□□ -0.3
SMARCE1-202ENST00000348513 TICAM2Q86XR7 235 aa13.18□□□□□ -0.3
SMARCE1-202ENST00000348513 ARAP1Q96P48 1450 aa13.18□□□□□ -0.3
SMARCE1-202ENST00000348513 SURF6O75683 361 aaKnown RBP13.18□□□□□ -0.3
SMARCE1-202ENST00000348513 LRCH2Q5VUJ6 765 aa13.18□□□□□ -0.3
SMARCE1-202ENST00000348513 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
SMARCE1-202ENST00000348513 FSD1Q9BTV5 496 aa13.18□□□□□ -0.3
SMARCE1-202ENST00000348513 PLEKHO1Q53GL0 409 aaPredicted RBP13.18□□□□□ -0.3
SMARCE1-202ENST00000348513 RALYLQ86SE5 291 aaKnown RBP13.18□□□□□ -0.3
SMARCE1-202ENST00000348513 TSPY26PQ9H489 355 aa13.18□□□□□ -0.3
SMARCE1-202ENST00000348513 UTP14CQ5TAP6 766 aaKnown RBP13.17□□□□□ -0.3
SMARCE1-202ENST00000348513 PPP1R1BQ9UD71 204 aaPredicted RBP13.17□□□□□ -0.3
SMARCE1-202ENST00000348513 GOLGA6L10A6NI86 522 aa13.17□□□□□ -0.3
SMARCE1-202ENST00000348513 SULT6B1Q6IMI4 303 aa13.17□□□□□ -0.3
SMARCE1-202ENST00000348513 GAS2L2Q8NHY3 880 aa13.17□□□□□ -0.3
SMARCE1-202ENST00000348513 C22orf23Q9BZE7 217 aa13.17□□□□□ -0.3
SMARCE1-202ENST00000348513 TPM1P09493 284 aa13.17□□□□□ -0.3
SMARCE1-202ENST00000348513 KIF6Q6ZMV9 814 aa13.17□□□□□ -0.3
SMARCE1-202ENST00000348513 STAC3Q96MF2 364 aa13.17□□□□□ -0.3
SMARCE1-202ENST00000348513 CCP110O43303 1012 aa13.16□□□□□ -0.3
SMARCE1-202ENST00000348513 EIF3JO75822 258 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-202ENST00000348513 MNAT1P51948 309 aa13.16□□□□□ -0.3
SMARCE1-202ENST00000348513 C9orf84Q5VXU9 1444 aa13.16□□□□□ -0.3
SMARCE1-202ENST00000348513 TWISTNBQ3B726 338 aaPredicted RBP13.16□□□□□ -0.3
SMARCE1-202ENST00000348513 PRIMPOLQ96LW4 560 aa13.16□□□□□ -0.3
SMARCE1-202ENST00000348513 SYNJ1O43426 1573 aa13.16□□□□□ -0.3
SMARCE1-202ENST00000348513 MCM5P33992 734 aa13.15□□□□□ -0.3
SMARCE1-202ENST00000348513 TOM1L2Q6ZVM7 507 aa13.15□□□□□ -0.3
SMARCE1-202ENST00000348513 DMTNQ08495 405 aa13.15□□□□□ -0.3
SMARCE1-202ENST00000348513 ZRSR2Q15696 482 aaKnown RBP13.15□□□□□ -0.3
SMARCE1-202ENST00000348513 NOB1Q9ULX3 412 aaKnown RBP13.15□□□□□ -0.3
SMARCE1-202ENST00000348513 PIP4K2BP78356 416 aa13.15□□□□□ -0.3
SMARCE1-202ENST00000348513 CCDC43Q96MW1 224 aaKnown RBP13.15□□□□□ -0.3
SMARCE1-202ENST00000348513 BACH2Q9BYV9 841 aa13.15□□□□□ -0.3
SMARCE1-202ENST00000348513 TATP17735 454 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-202ENST00000348513 KIAA1328Q86T90 577 aa13.14□□□□□ -0.31
SMARCE1-202ENST00000348513 MRC2Q9UBG0 1479 aa13.14□□□□□ -0.31
SMARCE1-202ENST00000348513 MYL6BP14649 208 aa13.14□□□□□ -0.31
SMARCE1-202ENST00000348513 NUCB2P80303 420 aa13.14□□□□□ -0.31
SMARCE1-202ENST00000348513 RRS1Q15050 365 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-202ENST00000348513 CDC45O75419 566 aa13.14□□□□□ -0.31
SMARCE1-202ENST00000348513 IKQ13123 557 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-202ENST00000348513 CENPHQ9H3R5 247 aa13.14□□□□□ -0.31
SMARCE1-202ENST00000348513 SMG6Q86US8 1419 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-202ENST00000348513 BRD4O60885 1362 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-202ENST00000348513 SLC4A2P04920 1241 aa13.14□□□□□ -0.31
SMARCE1-202ENST00000348513 NBPF8Q3BBV2 869 aa13.14□□□□□ -0.31
SMARCE1-202ENST00000348513 CCDC47Q96A33 483 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-202ENST00000348513 SIL1Q9H173 461 aa13.14□□□□□ -0.31
SMARCE1-202ENST00000348513 SNAPC4Q5SXM2 1469 aa13.14□□□□□ -0.31
SMARCE1-202ENST00000348513 CNTROBQ8N137 903 aa13.14□□□□□ -0.31
SMARCE1-202ENST00000348513 THEMISQ8N1K5 641 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-202ENST00000348513 A0A1B0GUL7 405 aa13.13□□□□□ -0.31
SMARCE1-202ENST00000348513 CABP4P57796 275 aa13.13□□□□□ -0.31
SMARCE1-202ENST00000348513 KRT222Q8N1A0 295 aa13.13□□□□□ -0.31
SMARCE1-202ENST00000348513 ANKRD20A12PQ8NF67 263 aa13.13□□□□□ -0.31
SMARCE1-202ENST00000348513 ZBTB12Q9Y330 459 aaPredicted RBP13.13□□□□□ -0.31
SMARCE1-202ENST00000348513 BCAR3O75815 825 aa13.13□□□□□ -0.31
SMARCE1-202ENST00000348513 SAFBQ15424 915 aaKnown RBP eCLIP13.13□□□□□ -0.31
SMARCE1-202ENST00000348513 CLASRPQ8N2M8 674 aaKnown RBP13.13□□□□□ -0.31
SMARCE1-202ENST00000348513 MAP4K4O95819 1239 aaPredicted RBP13.12□□□□□ -0.31
SMARCE1-202ENST00000348513 CERS3Q8IU89 383 aa13.12□□□□□ -0.31
SMARCE1-202ENST00000348513 NINLQ9Y2I6 1382 aa13.12□□□□□ -0.31
SMARCE1-202ENST00000348513 MYO6Q9UM54 1294 aa13.12□□□□□ -0.31
SMARCE1-202ENST00000348513 RRAGDQ9NQL2 400 aaPredicted RBP13.12□□□□□ -0.31
SMARCE1-202ENST00000348513 CNNM1Q9NRU3 951 aa13.12□□□□□ -0.31
SMARCE1-202ENST00000348513 HDGFL1Q5TGJ6 251 aa13.12□□□□□ -0.31
SMARCE1-202ENST00000348513 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
SMARCE1-202ENST00000348513 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.12□□□□□ -0.31
SMARCE1-202ENST00000348513 GNAI3P08754 354 aa13.11□□□□□ -0.31
SMARCE1-202ENST00000348513 ATP2B1P20020 1258 aa13.11□□□□□ -0.31
SMARCE1-202ENST00000348513 TBC1D2BQ9UPU7 963 aa13.11□□□□□ -0.31
SMARCE1-202ENST00000348513 GOLGA6L7A0A1B0GV03 622 aa13.1□□□□□ -0.31
SMARCE1-202ENST00000348513 RNF214Q8ND24 703 aa13.1□□□□□ -0.31
SMARCE1-202ENST00000348513 ERBINQ96RT1 1412 aa13.1□□□□□ -0.31
SMARCE1-202ENST00000348513 MCM4P33991 863 aa13.1□□□□□ -0.31
SMARCE1-202ENST00000348513 HOOK1Q9UJC3 728 aaKnown RBP13.1□□□□□ -0.31
SMARCE1-202ENST00000348513 KRI1Q8N9T8 703 aaKnown RBP13.1□□□□□ -0.31
SMARCE1-202ENST00000348513 RTEL1-TNFRSF6BF6WH68 1400 aa13.1□□□□□ -0.31
SMARCE1-202ENST00000348513 SKIDA1Q1XH10 827 aa13.1□□□□□ -0.31
SMARCE1-202ENST00000348513 TTC39AQ5SRH9 613 aa13.1□□□□□ -0.31
SMARCE1-202ENST00000348513 OFD1O75665 1012 aa13.1□□□□□ -0.31
SMARCE1-202ENST00000348513 IVLP07476 585 aa13.1□□□□□ -0.31
SMARCE1-202ENST00000348513 PDZRN3Q9UPQ7 1066 aa13.1□□□□□ -0.31
SMARCE1-202ENST00000348513 CC2D2AQ9P2K1 1620 aa13.09□□□□□ -0.31
SMARCE1-202ENST00000348513 TMCO3Q6UWJ1 677 aa13.09□□□□□ -0.31
SMARCE1-202ENST00000348513 CCDC73Q6ZRK6 1079 aa13.09□□□□□ -0.31
SMARCE1-202ENST00000348513 SECISBP2LQ93073 1101 aaKnown RBP13.09□□□□□ -0.31
SMARCE1-202ENST00000348513 OGFRQ9NZT2 677 aa13.09□□□□□ -0.31
SMARCE1-202ENST00000348513 KIAA1107Q9UPP5 1409 aa13.09□□□□□ -0.31
SMARCE1-202ENST00000348513 IFT140Q96RY7 1462 aa13.09□□□□□ -0.31
SMARCE1-202ENST00000348513 RABEP1Q15276 862 aa13.09□□□□□ -0.31
SMARCE1-202ENST00000348513 GNAI2P04899 355 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms