RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 CDCA7LQ96GN5 454 aa17.06■□□□□ 0.32
CSNK1G3-201ENST00000345990 POLKQ9UBT6 870 aa17.06■□□□□ 0.32
CSNK1G3-201ENST00000345990 NUTM2BA6NNL0 878 aaPredicted RBP17.06■□□□□ 0.32
CSNK1G3-201ENST00000345990 NUTM2EB1AL46 878 aaPredicted RBP17.06■□□□□ 0.32
CSNK1G3-201ENST00000345990 NUTM2AQ8IVF1 878 aaPredicted RBP17.06■□□□□ 0.32
CSNK1G3-201ENST00000345990 CLTCQ00610 1675 aaKnown RBP17.06■□□□□ 0.32
CSNK1G3-201ENST00000345990 GTF2E1P29083 439 aaPredicted RBP17.06■□□□□ 0.32
CSNK1G3-201ENST00000345990 VWDEQ8N2E2 1590 aa17.05■□□□□ 0.32
CSNK1G3-201ENST00000345990 ALDH1L2Q3SY69 923 aa17.04■□□□□ 0.32
CSNK1G3-201ENST00000345990 LMTK3Q96Q04 1460 aa17.04■□□□□ 0.32
CSNK1G3-201ENST00000345990 TAF7Q15545 349 aaPredicted RBP17.04■□□□□ 0.32
CSNK1G3-201ENST00000345990 ANKRD24Q8TF21 1146 aa17.04■□□□□ 0.32
CSNK1G3-201ENST00000345990 TRPM1Q7Z4N2 1603 aa17.04■□□□□ 0.32
CSNK1G3-201ENST00000345990 HDGFL1Q5TGJ6 251 aa17.04■□□□□ 0.32
CSNK1G3-201ENST00000345990 EXOC6Q8TAG9 804 aa17.04■□□□□ 0.32
CSNK1G3-201ENST00000345990 DEPDC5O75140 1603 aa17.04■□□□□ 0.32
CSNK1G3-201ENST00000345990 ANKARQ7Z5J8 1434 aa17.03■□□□□ 0.32
CSNK1G3-201ENST00000345990 USP35Q9P2H5 1018 aa17.03■□□□□ 0.32
CSNK1G3-201ENST00000345990 UBAP1LF5GYI3 381 aa17.03■□□□□ 0.32
CSNK1G3-201ENST00000345990 PLIN1O60240 522 aa17.03■□□□□ 0.32
CSNK1G3-201ENST00000345990 CCT4P50991 539 aaKnown RBP17.03■□□□□ 0.32
CSNK1G3-201ENST00000345990 RIC3Q7Z5B4 369 aa17.03■□□□□ 0.32
CSNK1G3-201ENST00000345990 CHMP3Q9Y3E7 222 aa17.02■□□□□ 0.32
CSNK1G3-201ENST00000345990 SBNO1A3KN83 1393 aa17.02■□□□□ 0.32
CSNK1G3-201ENST00000345990 BTBD11A6QL63 1104 aa17.01■□□□□ 0.31
CSNK1G3-201ENST00000345990 IP6K1Q92551 441 aa17.01■□□□□ 0.31
CSNK1G3-201ENST00000345990 MADDQ8WXG6 1647 aa17.01■□□□□ 0.31
CSNK1G3-201ENST00000345990 KCNJ4P48050 445 aa17.01■□□□□ 0.31
CSNK1G3-201ENST00000345990 GORABQ5T7V8 394 aa17.01■□□□□ 0.31
CSNK1G3-201ENST00000345990 KIAA1211Q6ZU35 1233 aa17.01■□□□□ 0.31
CSNK1G3-201ENST00000345990 GCP02774 474 aa17.01■□□□□ 0.31
CSNK1G3-201ENST00000345990 NKTRP30414 1462 aaKnown RBP17.01■□□□□ 0.31
CSNK1G3-201ENST00000345990 IFNL2Q8IZJ0 200 aa17.01■□□□□ 0.31
CSNK1G3-201ENST00000345990 PLEKHH1Q9ULM0 1364 aa17■□□□□ 0.31
CSNK1G3-201ENST00000345990 ALKQ9UM73 1620 aa17■□□□□ 0.31
CSNK1G3-201ENST00000345990 DDX54Q8TDD1 881 aaKnown RBP16.99■□□□□ 0.31
CSNK1G3-201ENST00000345990 ROBO2Q9HCK4 1378 aa16.99■□□□□ 0.31
CSNK1G3-201ENST00000345990 TSR2Q969E8 191 aaKnown RBP16.99■□□□□ 0.31
CSNK1G3-201ENST00000345990 LRRFIP1Q32MZ4 808 aaKnown RBP16.98■□□□□ 0.31
CSNK1G3-201ENST00000345990 SLAIN2Q9P270 581 aa16.98■□□□□ 0.31
CSNK1G3-201ENST00000345990 SPATA31D1Q6ZQQ2 1576 aa16.98■□□□□ 0.31
CSNK1G3-201ENST00000345990 ATF7IPQ6VMQ6 1270 aa16.98■□□□□ 0.31
CSNK1G3-201ENST00000345990 EIF4A2Q14240 407 aaKnown RBP16.98■□□□□ 0.31
CSNK1G3-201ENST00000345990 HSP90AB2PQ58FF8 381 aa16.98■□□□□ 0.31
CSNK1G3-201ENST00000345990 KIF6Q6ZMV9 814 aa16.98■□□□□ 0.31
CSNK1G3-201ENST00000345990 TMEM94Q12767 1356 aa16.98■□□□□ 0.31
CSNK1G3-201ENST00000345990 UBTFL1P0CB47 393 aaPredicted RBP16.98■□□□□ 0.31
CSNK1G3-201ENST00000345990 RICTORQ6R327 1708 aa16.97■□□□□ 0.31
CSNK1G3-201ENST00000345990 AATKQ6ZMQ8 1374 aa16.97■□□□□ 0.31
CSNK1G3-201ENST00000345990 APBB1O00213 710 aa16.97■□□□□ 0.31
CSNK1G3-201ENST00000345990 DLC1Q96QB1 1528 aa16.96■□□□□ 0.31
CSNK1G3-201ENST00000345990 EXOC5O00471 708 aa16.96■□□□□ 0.31
CSNK1G3-201ENST00000345990 SLC4A2P04920 1241 aa16.96■□□□□ 0.31
CSNK1G3-201ENST00000345990 SOS1Q07889 1333 aaPredicted RBP16.96■□□□□ 0.31
CSNK1G3-201ENST00000345990 FRMPD1Q5SYB0 1578 aa16.96■□□□□ 0.31
CSNK1G3-201ENST00000345990 NGLY1Q96IV0 654 aa16.96■□□□□ 0.31
CSNK1G3-201ENST00000345990 NECTIN2Q92692 538 aa16.96■□□□□ 0.31
CSNK1G3-201ENST00000345990 TEX13AQ9BXU3 409 aaPredicted RBP16.96■□□□□ 0.31
CSNK1G3-201ENST00000345990 MAP3K19Q56UN5 1328 aa16.96■□□□□ 0.3
CSNK1G3-201ENST00000345990 KIF24Q5T7B8 1368 aa16.95■□□□□ 0.3
CSNK1G3-201ENST00000345990 CDCA7Q9BWT1 371 aaPredicted RBP16.95■□□□□ 0.3
CSNK1G3-201ENST00000345990 HOXC9P31274 260 aa16.95■□□□□ 0.3
CSNK1G3-201ENST00000345990 KIAA1210Q9ULL0 1709 aa16.94■□□□□ 0.3
CSNK1G3-201ENST00000345990 TMOD3Q9NYL9 352 aa16.94■□□□□ 0.3
CSNK1G3-201ENST00000345990 STARD3NLO95772 234 aa16.94■□□□□ 0.3
CSNK1G3-201ENST00000345990 PREX1Q8TCU6 1659 aa16.94■□□□□ 0.3
CSNK1G3-201ENST00000345990 G3BP1Q13283 466 aaKnown RBP eCLIP16.94■□□□□ 0.3
CSNK1G3-201ENST00000345990 ORAI2Q96SN7 254 aa16.94■□□□□ 0.3
CSNK1G3-201ENST00000345990 RBM42Q9BTD8 480 aaKnown RBP16.94■□□□□ 0.3
CSNK1G3-201ENST00000345990 AKAP4Q5JQC9 854 aa16.93■□□□□ 0.3
CSNK1G3-201ENST00000345990 ANKRD45Q5TZF3 282 aa16.93■□□□□ 0.3
CSNK1G3-201ENST00000345990 BABAM1Q9NWV8 329 aa16.93■□□□□ 0.3
CSNK1G3-201ENST00000345990 NOB1Q9ULX3 412 aaKnown RBP16.93■□□□□ 0.3
CSNK1G3-201ENST00000345990 ANP32EQ9BTT0 268 aa16.93■□□□□ 0.3
CSNK1G3-201ENST00000345990 NEXMIFQ5QGS0 1516 aa16.93■□□□□ 0.3
CSNK1G3-201ENST00000345990 FANCIQ9NVI1 1328 aa16.93■□□□□ 0.3
CSNK1G3-201ENST00000345990 DUSP27Q5VZP5 1158 aa16.93■□□□□ 0.3
CSNK1G3-201ENST00000345990 GOLGA6L22H0YM25 854 aa16.92■□□□□ 0.3
CSNK1G3-201ENST00000345990 PANK1Q8TE04 598 aa16.92■□□□□ 0.3
CSNK1G3-201ENST00000345990 SRCIN1Q9C0H9 1055 aa16.92■□□□□ 0.3
CSNK1G3-201ENST00000345990 PTCH1Q13635 1447 aa16.92■□□□□ 0.3
CSNK1G3-201ENST00000345990 ADAMTS2O95450 1211 aa16.92■□□□□ 0.3
CSNK1G3-201ENST00000345990 MCM10Q7L590 875 aa16.92■□□□□ 0.3
CSNK1G3-201ENST00000345990 GNAI2P04899 355 aa16.91■□□□□ 0.3
CSNK1G3-201ENST00000345990 GCC1Q96CN9 775 aa16.91■□□□□ 0.3
CSNK1G3-201ENST00000345990 MVPQ14764 893 aaKnown RBP16.91■□□□□ 0.3
CSNK1G3-201ENST00000345990 NRXN1Q9ULB1 1477 aa16.9■□□□□ 0.3
CSNK1G3-201ENST00000345990 FMNL2Q96PY5 1086 aa16.9■□□□□ 0.3
CSNK1G3-201ENST00000345990 ZRANB1Q9UGI0 708 aa16.9■□□□□ 0.3
CSNK1G3-201ENST00000345990 FGD1P98174 961 aa16.9■□□□□ 0.3
CSNK1G3-201ENST00000345990 HSCBQ8IWL3 235 aa16.9■□□□□ 0.3
CSNK1G3-201ENST00000345990 USHBP1Q8N6Y0 703 aa16.9■□□□□ 0.3
CSNK1G3-201ENST00000345990 ADGRL3Q9HAR2 1447 aa16.9■□□□□ 0.3
CSNK1G3-201ENST00000345990 AIMP1Q12904 312 aaKnown RBP16.9■□□□□ 0.3
CSNK1G3-201ENST00000345990 USP6P35125 1406 aa16.9■□□□□ 0.3
CSNK1G3-201ENST00000345990 PTPRCP08575 1304 aa16.9■□□□□ 0.3
CSNK1G3-201ENST00000345990 RARSP54136 660 aaKnown RBP16.9■□□□□ 0.3
CSNK1G3-201ENST00000345990 ERC1Q8IUD2 1116 aa16.9■□□□□ 0.3
CSNK1G3-201ENST00000345990 ZCRB1Q8TBF4 217 aaKnown RBP16.9■□□□□ 0.3
CSNK1G3-201ENST00000345990 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms