RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 CCDC27Q2M243 656 aa22.77■■□□□ 1.24
HDAC4-201ENST00000345617 FMNL2Q96PY5 1086 aa22.77■■□□□ 1.24
HDAC4-201ENST00000345617 ANKRD62A6NC57 917 aa22.77■■□□□ 1.24
HDAC4-201ENST00000345617 DYNC1I1O14576 645 aa22.77■■□□□ 1.24
HDAC4-201ENST00000345617 GOLGA6L9A6NEM1 432 aa22.76■■□□□ 1.23
HDAC4-201ENST00000345617 BACH2Q9BYV9 841 aa22.76■■□□□ 1.23
HDAC4-201ENST00000345617 GCOM1H8Y6P7 765 aaPredicted RBP22.76■■□□□ 1.23
HDAC4-201ENST00000345617 KRT18P05783 430 aaKnown RBP22.76■■□□□ 1.23
HDAC4-201ENST00000345617 MYZAPP0CAP1 466 aa22.76■■□□□ 1.23
HDAC4-201ENST00000345617 BRPF1P55201 1214 aaPredicted RBP22.76■■□□□ 1.23
HDAC4-201ENST00000345617 NUP62CLQ9H1M0 184 aa22.76■■□□□ 1.23
HDAC4-201ENST00000345617 MAP2K1Q02750 393 aaPredicted RBP22.76■■□□□ 1.23
HDAC4-201ENST00000345617 KIF5CO60282 957 aa22.76■■□□□ 1.23
HDAC4-201ENST00000345617 UPF3BQ9BZI7 483 aaKnown RBP22.76■■□□□ 1.23
HDAC4-201ENST00000345617 PTPN14Q15678 1187 aa22.75■■□□□ 1.23
HDAC4-201ENST00000345617 CETN2P41208 172 aa22.75■■□□□ 1.23
HDAC4-201ENST00000345617 MAP3K11Q16584 847 aa22.75■■□□□ 1.23
HDAC4-201ENST00000345617 TUBB4BP68371 445 aa22.75■■□□□ 1.23
HDAC4-201ENST00000345617 WASHC4Q2M389 1173 aa22.75■■□□□ 1.23
HDAC4-201ENST00000345617 KIAA1328Q86T90 577 aa22.75■■□□□ 1.23
HDAC4-201ENST00000345617 KRT32Q14532 448 aa22.75■■□□□ 1.23
HDAC4-201ENST00000345617 ELL2O00472 640 aaPredicted RBP22.75■■□□□ 1.23
HDAC4-201ENST00000345617 ZSCAN31Q96LW9 406 aaPredicted RBP22.75■■□□□ 1.23
HDAC4-201ENST00000345617 LTV1Q96GA3 475 aaPredicted RBP22.74■■□□□ 1.23
HDAC4-201ENST00000345617 SPATA32Q96LK8 384 aa22.74■■□□□ 1.23
HDAC4-201ENST00000345617 CCDC30Q5VVM6 783 aa22.74■■□□□ 1.23
HDAC4-201ENST00000345617 WASF1Q92558 559 aa22.74■■□□□ 1.23
HDAC4-201ENST00000345617 PPP6R1Q9UPN7 881 aa22.74■■□□□ 1.23
HDAC4-201ENST00000345617 TAF4BQ92750 862 aa22.73■■□□□ 1.23
HDAC4-201ENST00000345617 TSPYL4Q9UJ04 414 aa22.73■■□□□ 1.23
HDAC4-201ENST00000345617 PPP1R12BO60237 982 aaPredicted RBP22.73■■□□□ 1.23
HDAC4-201ENST00000345617 SMC1AQ14683 1233 aaKnown RBP22.73■■□□□ 1.23
HDAC4-201ENST00000345617 VPS36Q86VN1 386 aa22.73■■□□□ 1.23
HDAC4-201ENST00000345617 PANK1Q8TE04 598 aa22.73■■□□□ 1.23
HDAC4-201ENST00000345617 DDX12PQ92771 950 aa22.73■■□□□ 1.23
HDAC4-201ENST00000345617 EIF2S2P20042 333 aaKnown RBP22.73■■□□□ 1.23
HDAC4-201ENST00000345617 GIGYF2Q6Y7W6 1299 aaKnown RBP22.73■■□□□ 1.23
HDAC4-201ENST00000345617 CFAP57Q96MR6 1250 aa22.73■■□□□ 1.23
HDAC4-201ENST00000345617 CEP131Q9UPN4 1083 aa22.72■■□□□ 1.23
HDAC4-201ENST00000345617 FOSBP53539 338 aa22.72■■□□□ 1.23
HDAC4-201ENST00000345617 NOL7Q9UMY1 257 aaKnown RBP22.72■■□□□ 1.23
HDAC4-201ENST00000345617 SKIDA1Q1XH10 827 aa22.72■■□□□ 1.23
HDAC4-201ENST00000345617 ERICH3Q5RHP9 1530 aa22.72■■□□□ 1.23
HDAC4-201ENST00000345617 TRAK1Q9UPV9 953 aa22.72■■□□□ 1.23
HDAC4-201ENST00000345617 PRKCSHP14314 528 aaPredicted RBP22.71■■□□□ 1.23
HDAC4-201ENST00000345617 CCT4P50991 539 aaKnown RBP22.71■■□□□ 1.23
HDAC4-201ENST00000345617 GNAI2P04899 355 aa22.71■■□□□ 1.23
HDAC4-201ENST00000345617 IVLP07476 585 aa22.71■■□□□ 1.23
HDAC4-201ENST00000345617 FGD6Q6ZV73 1430 aa22.71■■□□□ 1.23
HDAC4-201ENST00000345617 GSDMDP57764 484 aa22.71■■□□□ 1.23
HDAC4-201ENST00000345617 FAM193AP78312 1265 aa22.7■■□□□ 1.22
HDAC4-201ENST00000345617 SPECC1LQ69YQ0 1117 aa22.7■■□□□ 1.22
HDAC4-201ENST00000345617 CASQ1P31415 396 aa22.7■■□□□ 1.22
HDAC4-201ENST00000345617 ZNF428Q96B54 188 aa22.7■■□□□ 1.22
HDAC4-201ENST00000345617 HECW1Q76N89 1606 aa22.7■■□□□ 1.22
HDAC4-201ENST00000345617 POTEJP0CG39 1038 aa22.7■■□□□ 1.22
HDAC4-201ENST00000345617 NACAP1Q9BZK3 213 aa22.7■■□□□ 1.22
HDAC4-201ENST00000345617 MCM4P33991 863 aa22.69■■□□□ 1.22
HDAC4-201ENST00000345617 CCDC183Q5T5S1 534 aa22.69■■□□□ 1.22
HDAC4-201ENST00000345617 DNAJC2Q99543 621 aaKnown RBP22.69■■□□□ 1.22
HDAC4-201ENST00000345617 CTR9Q6PD62 1173 aa22.69■■□□□ 1.22
HDAC4-201ENST00000345617 TAOK3Q9H2K8 898 aa22.69■■□□□ 1.22
HDAC4-201ENST00000345617 ANKRD18BA2A2Z9 1011 aa22.69■■□□□ 1.22
HDAC4-201ENST00000345617 CTAGE5O15320 804 aa22.69■■□□□ 1.22
HDAC4-201ENST00000345617 BMP2KQ9NSY1 1161 aaPredicted RBP22.69■■□□□ 1.22
HDAC4-201ENST00000345617 GNL3LQ9NVN8 582 aaKnown RBP22.69■■□□□ 1.22
HDAC4-201ENST00000345617 CECR2Q9BXF3 1484 aa22.69■■□□□ 1.22
HDAC4-201ENST00000345617 PRIMPOLQ96LW4 560 aa22.68■■□□□ 1.22
HDAC4-201ENST00000345617 LARP1BQ659C4 914 aaKnown RBP22.68■■□□□ 1.22
HDAC4-201ENST00000345617 TIGD1Q96MW7 591 aa22.68■■□□□ 1.22
HDAC4-201ENST00000345617 PAXBP1Q9Y5B6 917 aa22.68■■□□□ 1.22
HDAC4-201ENST00000345617 SPA17Q15506 151 aa22.67■■□□□ 1.22
HDAC4-201ENST00000345617 CEP63Q96MT8 703 aa22.67■■□□□ 1.22
HDAC4-201ENST00000345617 ZSCAN25Q6NSZ9 544 aa22.67■■□□□ 1.22
HDAC4-201ENST00000345617 CCDC57Q2TAC2 916 aa22.66■■□□□ 1.22
HDAC4-201ENST00000345617 CCDC175P0C221 793 aa22.66■■□□□ 1.22
HDAC4-201ENST00000345617 NEUROD6Q96NK8 337 aa22.66■■□□□ 1.22
HDAC4-201ENST00000345617 AEBP2Q6ZN18 517 aaPredicted RBP22.66■■□□□ 1.22
HDAC4-201ENST00000345617 NAA15Q9BXJ9 866 aaKnown RBP22.66■■□□□ 1.22
HDAC4-201ENST00000345617 EHBP1Q8NDI1 1231 aa22.66■■□□□ 1.22
HDAC4-201ENST00000345617 SCAND2PQ9GZW5 306 aaPredicted RBP22.66■■□□□ 1.22
HDAC4-201ENST00000345617 RIC3Q7Z5B4 369 aa22.66■■□□□ 1.22
HDAC4-201ENST00000345617 FGFR1OPO95684 399 aaKnown RBP22.65■■□□□ 1.22
HDAC4-201ENST00000345617 BCL11BQ9C0K0 894 aaPredicted RBP22.65■■□□□ 1.22
HDAC4-201ENST00000345617 BBXQ8WY36 941 aaPredicted RBP22.64■■□□□ 1.22
HDAC4-201ENST00000345617 EHBP1L1Q8N3D4 1523 aa22.64■■□□□ 1.22
HDAC4-201ENST00000345617 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.64■■□□□ 1.21
HDAC4-201ENST00000345617 V9GYY5 206 aaPredicted RBP22.64■■□□□ 1.21
HDAC4-201ENST00000345617 DHX29Q7Z478 1369 aaKnown RBP22.64■■□□□ 1.21
HDAC4-201ENST00000345617 EVA1CP58658 441 aa22.63■■□□□ 1.21
HDAC4-201ENST00000345617 CTNNA3Q9UI47 895 aa22.63■■□□□ 1.21
HDAC4-201ENST00000345617 EFCAB5A4FU69 1503 aa22.63■■□□□ 1.21
HDAC4-201ENST00000345617 PAF1Q8N7H5 531 aa22.62■■□□□ 1.21
HDAC4-201ENST00000345617 C6orf163Q5TEZ5 329 aa22.62■■□□□ 1.21
HDAC4-201ENST00000345617 TANGO6Q9C0B7 1094 aa22.62■■□□□ 1.21
HDAC4-201ENST00000345617 CFAP100Q494V2 611 aa22.62■■□□□ 1.21
HDAC4-201ENST00000345617 UBE2Q2Q8WVN8 375 aa22.62■■□□□ 1.21
HDAC4-201ENST00000345617 FAM177A1Q8N128 213 aaPredicted RBP22.62■■□□□ 1.21
HDAC4-201ENST00000345617 GAS2L2Q8NHY3 880 aa22.62■■□□□ 1.21
HDAC4-201ENST00000345617 AKNAQ7Z591 1439 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms